Contig 005038:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF044D06+                                          GGCAGATCATCAGAAATTTAGCTTTCCCG
                      ____________________________________________________________
consensus                                            GGCAGATCATCAGAAATTTAGCTTTCCCG
 
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JMSF044D06+           GGAGAATTTACACAACAGTTGCAAAGAGACCAGCGAATTGCATTTCTACCATGGTGATGT
                      ____________________________________________________________
consensus             GGAGAATTTACACAACAGTTGCAAAGAGACCAGCGAATTGCATTTCTACCATGGTGATGT
 
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JMSF044D06+           TTTTATGTACAAATAGAGGCATGAACTTTTACCTTGAAGCCTTCCCAAAAGAGCACCACT
                      ____________________________________________________________
consensus             TTTTATGTACAAATAGAGGCATGAACTTTTACCTTGAAGCCTTCCCAAAAGAGCACCACT
 
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JMSF044D06+           ACCGAAACCTCCAATTACCGAATTCAACAAGTCATCAGGTTTTCCAGTTCTACTTACTCT
                      ____________________________________________________________
consensus             ACCGAAACCTCCAATTACCGAATTCAACAAGTCATCAGGTTTTCCAGTTCTACTTACTCT
 
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JMSF044D06+           TACAAACTCTCGGGCACCTGGAAAACATCAATGTCACCACAAGCATTGATCTCAATAGCA
                      ____________________________________________________________
consensus             TACAAACTCTCGGGCACCTGGAAAACATCAATGTCACCACAAGCATTGATCTCAATAGCA
 
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JMSF044D06+           TCCCAATTGTCATTTGCCTACCAAATATTTCTTTGAAAGTATAGATCATATACTGATCAG
JMSF014N03+                                             GAAAGTATAGATCATATACTGATCAG
JMSF017A02+                                             GAAAGTATAGATCATATACTGATCAG
                      ____________________________________________________________
consensus             TCCCAATTGTCATTTGCCTACCAAATATTTCTTTGAAAGTATAGATCATATACTGATCAG
 
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JMSF044D06+           CAGTCACCATTTCATATAAAAATAATAATTCCTTTTAAGAATATAATATACCCAGCTATA
JMSF014N03+           CAGTCACCATTTCATATAAAAATAATAATTCCTTTTAAGAATATAATATACCCAGCTATA
JMSF017A02+           CAGTCACCATTTCATATAAAAATAATAATTCCTTTTAAGAATATAATATACCCAGCTATA
                      ____________________________________________________________
consensus             CAGTCACCATTTCATATAAAAATAATAATTCCTTTTAAGAATATAATATACCCAGCTATA
 
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JMSF044D06+           TATGCCTTAACTGCTCCTTTTTCCAGCCCTCTTTTTTGGAAATTATATTCATCATGATTC
JMSF014N03+           TATGCCTTAACTGCTCCTTTTTCCAGCCCTCTTTTTTGGAAATTATATTCATCATGATTC
JMSF017A02+           TATGCCTTAACTGCTCCTTTTTCCAGCCCTCTTTTTTGGAAATTATATTCATCATGATTC
                      ____________________________________________________________
consensus             TATGCCTTAACTGCTCCTTTTTCCAGCCCTCTTTTTTGGAAATTATATTCATCATGATTC
 
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JMSF044D06+           AAAAACTAATTATTTGTAACAAAAAATTGCAATTACGTAAATATTCCAATACACCAAACA
JMSF014N03+           AAAAACTAATTATTTGTAACAAAAAATTGCAATTACGTAAATATTCCAATACACCAAACA
JMSF017A02+           AAAAACTAATTATTTGTAACAAAAAATTGCAATTACGTAAATATTCCAATACACCAAACA
                      ____________________________________________________________
consensus             AAAAACTAATTATTTGTAACAAAAAATTGCAATTACGTAAATATTCCAATACACCAAACA
 
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JMSF044D06+           ATGAAACACAAATTACCACAATAACAGCCAGTAACGATGGCGAAATTGGTTGCATAAGTG
JMSF014N03+           ATGAAACACAAATTACCACAATAACAGCCAGTAACGATGGCGAAATTGGTTGCATAAGTG
JMSF017A02+           ATGAAACACAAATTACCACAATAACAGCCAGTAACGATGGCGAAATTGGTTGCATAAGTG
                      ____________________________________________________________
consensus             ATGAAACACAAATTACCACAATAACAGCCAGTAACGATGGCGAAATTGGTTGCATAAGTG
 
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JMSF044D06+           GCGGAAATATTAGCAAGTCCATGAACTTTTCGATGCTTTGATACCAATCCAGCTCCTCCG
JMSF014N03+           GCGGAAATATTAGCAAGTCCATGAACTTTTCGATGCTTTGATACCAATCCAGCTCCTCCG
JMSF017A02+           GCGGAAATATTAGCAAGTCCATGAACTTTTCGATGCTTTGATACCAATCCAGCTCCTCCG
                      ____________________________________________________________
consensus             GCGGAAATATTAGCAAGTCCATGAACTTTTCGATGCTTTGATACCAATCCAGCTCCTCCG
 
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JMSF044D06+           CCAGCAATCCCTGCGAGTATAGTGGGGACGAGAATCCGTTCCTTCCAACTCGGAGATGAA
JMSF014N03+           CCAGCAATCCCTGCGAGTATAGTGGGGACGAGAATCCGTTCCTTCCAACTCGGAGATGAA
JMSF017A02+           CCAGCAATCCCTGCGAGTATAGTGGGGACGAGAATCCGTTCCTTCCAACTCGGAGATGAA
                      ____________________________________________________________
consensus             CCAGCAATCCCTGCGAGTATAGTGGGGACGAGAATCCGTTCCTTCCAACTCGGAGATGAA
 
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JMSF044D06+           GAAGACGCAACTCTTTCTTGAGTTTCATCACCCGCGGCCATGATCTCCGTCTGCTCCACC
JMSF014N03+           GAAGACGCAACTCTTTCTTGAGTTTCATCACCCGCGGCCATGATCTCCGTCTGCTCCACC
JMSF017A02+           GAAGACGCAACTCTTTCTTGAGTTTCATCACCCGCGGCCATGATCTCCGTCTGCTCCACC
                      ____________________________________________________________
consensus             GAAGACGCAACTCTTTCTTGAGTTTCATCACCCGCGGCCATGATCTCCGTCTGCTCCACC
 
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JMSF044D06+           TTCAAAGTTCAGACTTTCGATTTCAGCAGAGCCAATGGCGATGGAGAGTTCATTCAACTC
JMSF014N03+           TTCAAAGTTCAGACTTTCGATTTCAGCAGAGCCAATGGCGATGGAGAGTTCATTCAACTC
JMSF017A02+           TTCAAAGTTCAGACTTTCGATTTCAGCAGAGCCAATGGCGATGGAGAGTTCATTCAACTC
                      ____________________________________________________________
consensus             TTCAAAGTTCAGACTTTCGATTTCAGCAGAGCCAATGGCGATGGAGAGTTCATTCAACTC