| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004A18 | Sequence | 236 | 005037 (6) | gb|KHM99576.1| | 1e-08 | hypothetical protein glysoja_006419 [Glycine soja] | |||||
| JMSF005K06 | Sequence | 385 | 005037 (6) | emb|CDY38970.1| | 2e-20 | BnaC07g18500D [Brassica napus] | |||||
| JMSF016P19 | Sequence | 251 | 005037 (6) | 749 | 007214 (2) | gb|KHN06596.1| | 4e-05 | Copia protein, partial [Glycine soja] | |||
| JMSF035P03 | Sequence | 632 | 005037 (6) | gb|KHM99576.1| | 3e-36 | hypothetical protein glysoja_006419 [Glycine soja] | 669 | 005750 (3) | emb|CBI20385.3| | 2e-10 | unnamed protein product [Vitis vinifera] |
| JMSF043J24 | Sequence | 733 | 005037 (6) | ref|XP_006586078.1| | 72.0 | PREDICTED: uncharacterized protein LOC100794157 [Glycine max] | 719 | 007214 (2) | gb|KHN06596.1| | 3e-05 | Copia protein, partial [Glycine soja] |
| JMSF049E14 | Sequence | 715 | 005037 (6) | ref|XP_002528769.1| | 2e-36 | conserved hypothetical protein [Ricinus communis] gb|EEF33591.1| conserved hypot | 690 | 005750 (3) | emb|CBI20385.3| | 2e-10 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF049E14+ TATGAGATGAATGAGAGCCATCTGGTCCAGCA
____________________________________________________________
consensus TATGAGATGAATGAGAGCCATCTGGTCCAGCA
. : . : . : . : . : . :
JMSF049E14+ GAACCGCACCGCCCACCAAGCAGTAGGTAACACCAATGTCACCAGGCTTCATATGGAGTT
____________________________________________________________
consensus GAACCGCACCGCCCACCAAGCAGTAGGTAACACCAATGTCACCAGGCTTCATATGGAGTT
. : . : . : . : . : . :
JMSF049E14+ TGGAATGGAAGAAGAAGATGAGGGCCACGGTTACAAGTAAAGCATTACATACAAACCGCC
____________________________________________________________
consensus TGGAATGGAAGAAGAAGATGAGGGCCACGGTTACAAGTAAAGCATTACATACAAACCGCC
. : . : . : . : . : . :
JMSF049E14+ ATATGCACCAGAAGTAGCTAGCTATACCCTTCCACTGCTGGACCGCAATCATCTTGGTGA
____________________________________________________________
consensus ATATGCACCAGAAGTAGCTAGCTATACCCTTCCACTGCTGGACCGCAATCATCTTGGTGA
. : . : . : . : . : . :
JMSF049E14+ ACATGGCATCATACATGAAGCTGAGCTCCATTTCCATCACTTTAAACGCATCCTCTACAT
____________________________________________________________
consensus ACATGGCATCATACATGAAGCTGAGCTCCATTTCCATCACTTTAAACGCATCCTCTACAT
. : . : . : . : . : . :
JMSF049E14+ TTAGATTCTTGAACCAGTCCTTCTCCTTCCCACACTCGTCGTGGAGAAACGAGTGATCAA
____________________________________________________________
consensus TTAGATTCTTGAACCAGTCCTTCTCCTTCCCACACTCGTCGTGGAGAAACGAGTGATCAA
. : . : . : . : . : . :
JMSF049E14+ TGATGAAGCCTTTGAAAATTTGGTGGCACTCGTAAGCCTTCCTTACAATCTCGTACTGAT
____________________________________________________________
consensus TGATGAAGCCTTTGAAAATTTGGTGGCACTCGTAAGCCTTCCTTACAATCTCGTACTGAT
. : . : . : . : . : . :
JMSF049E14+ TCATAATGTTGTCCGTCATATCCTTCCCCTCCGCCCTAATAAGCTCCTTAGAGGCAACAG
____________________________________________________________
consensus TCATAATGTTGTCCGTCATATCCTTCCCCTCCGCCCTAATAAGCTCCTTAGAGGCAACAG
. : . : . : . : . : . :
JMSF049E14+ AATCTAGGCTCTTGCCGATGGACTTCCTGACGAAACGGGAAGACGCAAGCTGGAGAGAGA
JMSF035P03+ TCTTGCCGATGGACTTCCTGACGAAACGGGAAGACGCAAGCTGGAGAGAGA
____________________________________________________________
consensus AATCTAGGCTCTTGCCGATGGACTTCCTGACGAAACGGGAAGACGCAAGCTGGAGAGAGA
. : . : . : . : . : . :
JMSF049E14+ GGATACGCTCAACGCACTTGACGATTCCGACCAAGAAGACGATGCCCGTGGGGAGCAGCC
JMSF035P03+ GGATACGCTCAACGCACTTGACGATTCCGACCAAGAAGACGATGCCCGTGGGGAGCAGCC
____________________________________________________________
consensus GGATACGCTCAACGCACTTGACGATTCCGACCAAGAAGACGATGCCCGTGGGGAGCAGCC
. : . : . : . : . : . :
JMSF049E14+ ATTCGCTTTGGAAGATTTTGTATTGGTACAACACCACCAACACTGAGCAGATCTGAACCA
JMSF035P03+ ATTCGCTTTGGAAGATTTTGTATTGGTACAACACCACCAACACTGAGCAGATCTGAACCA
____________________________________________________________
consensus ATTCGCTTTGGAAGATTTTGTATTGGTACAACACCACCAACACTGAGCAGATCTGAACCA
. : . : . : . : . : . :
JMSF049E14+ TTTGGGTGAGCAAATGGCGGTGCCATAAATTGTTGTCCTCCATGGCCAGTGCAGTGATGG
JMSF035P03+ TTTGGGTGAGCAAATGGCGGTGCCATAAATTGTTGTCCTCCATGGCCAGTGCAGTGATGG
____________________________________________________________
consensus TTTGGGTGAGCAAATGGCGGTGCCATAAATTGTTGTCCTCCATGGCCAGTGCAGTGATGG
. : . : . : . : . : . :
JMSF049E14+ TGTGAGGCCCGCCCAGATG
JMSF035P03+ TGTGAGGCCCGCCCAGATGCACAAGCAGAAACGGCGCCCAGAAAGGGAAGATCTTATTAT
____________________________________________________________
consensus TGTGAGGCCCGCCCAGATGCACAAGCAGAAACGGCGCCCAGAAAGGGAAGATCTTATTAT
. : . : . : . : . : . :
JMSF004A18+ GTTGTAGA
JMSF005K06+ GTTGTAGA
JMSF035P03+ ATTCTCCCACTTTTGGTGCGCACTCATATACACTTTCCTCTTTTGGTGCGCTGTTGTAGA
JMSF043J24+ GTTGTAGA
____________________________________________________________
consensus ATTCTCCCACTTTTGGTGCGCACTCATATACACTTTCCTCTTTTGGTGCGCTGTTGTAGA
. : . : . : . : . : . :
JMSF004A18+ TGAGAGATAAGGCGAAGGTGGAAAAGAAGCTTGCCAGTAAATACACACCCCAGATCACCA
JMSF005K06+ TGAGAGATAAGGCGAAGGTGGAAAAGAAGCTTGCCAGTAAATACACACCCCAGATCACCA
JMSF035P03+ TGAGAGATAAGGCGAAGGTGGAAAAGAAGCTTGCCAGTAAATACACACCCCAGATCACCA
JMSF043J24+ TGAGGGATAAGGCGAAGGTGGAAAAGAAGCTTGCCAGTAAATACACAGCCCATATCACCA
____________________________________________________________
consensus TGAGAGATAAGGCGAAGGTGGAAAAGAAGCTTGCCAGTAAATACACACCCCAGATCACCA
. : . : . : . : . : . :
JMSF004A18+ GATACAGGAATGCGTTGTTTGACCATCTTCTCATCGGCGTAAGGAAAACCAGTGTCATTT
JMSF005K06+ GATACATAAATCCGTTGTTTACCCATTTTCTCAGCGGCGCAAGGAAAAGCAGTATCATTT
JMSF035P03+ GATACAGGAATGCGTTGTTTGACCATCTTCTCATCGGCGTAAGGAAAACCAGTGTCATTT
JMSF043J24+ GATACATGAATCCGTTCTTTACCCATCTTCTCATCGGCGCAAGGAAAATCAGTATCATTT
____________________________________________________________
consensus GATACATGAATGCGTTGTTTGCCCATCTTCTCATCGGCGTAAGGAAAACCAGTGTCATTT
. : . : . : . : . : . :
JMSF004A18+ GGAAGAGGAGGCTAGCCATAACGTAGCATTGCATGTTCCATTTTTCCAATATGT
JMSF005K06+ GGAAGAGGAGGCTAGCGATAACGAAGAATTGGATGTTCCATTTTTCCAATATGT
JMSF035P03+ GGAAGAGGAGGCTAGCCATAACGTAGCATTGCATGTTCCATTTTTCCAATATGT
JMSF043J24+ GGAACACAAGGCTAGCCATAACGTAGAATTGGATATTCCATTTTTCCAATATGTCCTTTA
____________________________________________________________
consensus GGAAGAGGAGGCTAGCCATAACGTAGCATTGGATGTTCCATTTTTCCAATATGTCCTTTA
. : . : . : . : . : . :
JMSF043J24+ TAAATGGAGGCCTCTTCATGCTATTGGTAGATGATATATATGATTTTGCGTCAATTTAAA
____________________________________________________________
consensus TAAATGGAGGCCTCTTCATGCTATTGGTAGATGATATATATGATTTTGCGTCAATTTAAA
. : . : . : . : . : . :
JMSF043J24+ TATACAAGGAAAATGTTCTTTAATTTACTGAAAATATATATCACATGCATAATCTAACCA
____________________________________________________________
consensus TATACAAGGAAAATGTTCTTTAATTTACTGAAAATATATATCACATGCATAATCTAACCA
. : . : . : . : . : . :
JMSF043J24+ GCTTATCTATGTTTCAAAATCAACCAAATCCAAAAAATGGTATATCTTAGCTTATGTAAA
____________________________________________________________
consensus GCTTATCTATGTTTCAAAATCAACCAAATCCAAAAAATGGTATATCTTAGCTTATGTAAA
. : . : . : . : . : . :
JMSF043J24+ GCCAAGTTCGTCACACAAGTTTCACCTTAAGCACATATTCGAATATTATCAACTAGAGTA
JMSF016P19+ CAACTAGAGTA
____________________________________________________________
consensus GCCAAGTTCGTCACACAAGTTTCACCTTAAGCACATATTCGAATATTATCAACTAGAGTA
. : . : . : . : . : . :
JMSF043J24+ ACACTTGTGTGAGACCGTCTCAGAGTCTTAATCCCTGCANCAGGTTAGATCTTTGACATC
JMSF016P19+ ACACTTGTGTGAGACCGTCTCAGAGTCTTAATCCCTGCAACAGGTTAGATCTTTGACATC
____________________________________________________________
consensus ACACTTGTGTGAGACCGTCTCAGAGTCTTAATCCCTGCAACAGGTTAGATCTTTGACATC
. : . : . : . : . : . :
JMSF043J24+ ATTAAATAAAGATCTCACAGATTGAGGACTCGTGAGACCGTCTTGCACAAAGTTTTATGA
JMSF016P19+ ATTAAATAAAGATCTCACAGATTGAGGACTCGTGAGACCGTCTTGCACAAAGTTTTATGA
____________________________________________________________
consensus ATTAAATAAAGATCTCACAGATTGAGGACTCGTGAGACCGTCTTGCACAAAGTTTTATGA
. : . : . : . : . : . :
JMSF043J24+ TAGAACTATACTATATTGATGCTAATAATTAAATAAGTGAGTAAACTTNCCTGCTGGCTT
JMSF016P19+ TAGAACTATACTATATTGATGCTAATAATTAAATAAGTGAGTAAACTTACCTGCTGGCTT
____________________________________________________________
consensus TAGAACTATACTATATTGATGCTAATAATTAAATAAGTGAGTAAACTTACCTGCTGGCTT
. : . : . : . : . : . :
JMSF043J24+ AGCTCTTATATGTAGGTGGTCCTTAGCTTATCCTGGTATATGTGTTTTTGTTACTCTGTC
JMSF016P19+ AGCTTTTATATGTAGGTGGTCCTTAGCTTATCCTTGTATATGTGTTTTTGTTACTCTGTC
____________________________________________________________
consensus AGCTTTTATATGTAGGTGGTCCTTAGCTTATCCTTGTATATGTGTTTTTGTTACTCTGTC