Contig 005032:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016F13Sequence573005032 (2)ref|XP_006339352.1|9e-47PREDICTED: uncharacterized protein LOC102602767 isoform X2 [Solanum tuberosum]817005032 (2)ref|XP_006339352.1|5e-71PREDICTED: uncharacterized protein LOC102602767 isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016F13- TATCTTTTGCTTTTCATATTCTTTACAACATCAACCTGTACATTT
                      ____________________________________________________________
consensus TATCTTTTGCTTTTCATATTCTTTACAACATCAACCTGTACATTT
 
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rJMSF016F13- GTCACCAAATATCTACTAAATCCTCACTGACTACTTCTAGTTCCTACTCAGGCAAACCTC
                      ____________________________________________________________
consensus GTCACCAAATATCTACTAAATCCTCACTGACTACTTCTAGTTCCTACTCAGGCAAACCTC
 
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rJMSF016F13- CTCGCCAGTACCCAGATTTGCTAATTCCACATTCAGATAGGAACTTCTGATAGTCAATTT
                      ____________________________________________________________
consensus CTCGCCAGTACCCAGATTTGCTAATTCCACATTCAGATAGGAACTTCTGATAGTCAATTT
 
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rJMSF016F13- CCAGTTTAGTGTAAGCTTGAGAAATCTTTTCAGATTGGAAATGTTCTTCATTGTCGGAAA
                      ____________________________________________________________
consensus CCAGTTTAGTGTAAGCTTGAGAAATCTTTTCAGATTGGAAATGTTCTTCATTGTCGGAAA
 
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rJMSF016F13- ACAGATCAATATCTTGTCTTGAATGATCAGTGTCTGGTACATCAGGATCCCTTAAGTCGC
                      ____________________________________________________________
consensus ACAGATCAATATCTTGTCTTGAATGATCAGTGTCTGGTACATCAGGATCCCTTAAGTCGC
 
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rJMSF016F13- TCAGGGCTAATTTCCATCTACTTTTAGACCCATGGTTGTCGATGCTGGGTTCATTCATAG
                      ____________________________________________________________
consensus TCAGGGCTAATTTCCATCTACTTTTAGACCCATGGTTGTCGATGCTGGGTTCATTCATAG
 
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rJMSF016F13- CTTGAAGTTTCCCATCACCAACATTTCTATTGAGAAAAGCATCCATGATGCACCTAATGC
JMSF016F13+ TATTGAGAAAAGCATCCATGATGCACCTAATGC
                      ____________________________________________________________
consensus CTTGAAGTTTCCCATCACCAACATTTCTATTGAGAAAAGCATCCATGATGCACCTAATGC
 
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rJMSF016F13- AAAAGGCTAACAAGGGAACCAGAACTAGGAAACAGCCAGTTGTTTTAGCATATGGCAATT
JMSF016F13+ AAAAGGCTAACAAGGGAACCAGAACTAGGAAACAGCCAGTTGTTTTAGCATATGGCAATT
                      ____________________________________________________________
consensus AAAAGGCTAACAAGGGAACCAGAACTAGGAAACAGCCAGTTGTTTTAGCATATGGCAATT
 
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rJMSF016F13- GATGTGATGATAGCATTGAAAGCATTTTCTGGTTCAAGTGTCTACTATAGAAATCCAAAT
JMSF016F13+ GATGTGATGATAGCATTGAAAGCATTTTCTGGTTCAAGTGTCTACTATAGAAATCCAAAT
                      ____________________________________________________________
consensus GATGTGATGATAGCATTGAAAGCATTTTCTGGTTCAAGTGTCTACTATAGAAATCCAAAT
 
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rJMSF016F13- GCTGCCGTGTTCCAGACAAATTTATTCGAGCTACTGGTAATCTAATCTTCGCTGCTGGAT
JMSF016F13+ GCTGCCGTGTTCCAGACAAATTTATTCGAGCTACTGGTAATCTAATCTTCGCTGCTGGAT
                      ____________________________________________________________
consensus GCTGCCGTGTTCCAGACAAATTTATTCGAGCTACTGGTAATCTAATCTTCGCTGCTGGAT
 
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rJMSF016F13- ACATTGGCTTGCATTCTCCAGAAGAGGAAGGAATGTTGAGATGTTTCCCTTGAAGAATAA
JMSF016F13+ ACATTGGCTTGCATTCTCCAGAAGAGGAAGGAATGTTGAGATGTTTCCCTTGAAGAATAA
                      ____________________________________________________________
consensus ACATTGGCTTGCATTCTCCAGAAGAGGAAGGAATGTTGAGATGTTTCCCTTGAAGAATAA
 
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rJMSF016F13- GGTCATCATCAAGAATATCCCTATTAGCAGCAGCAATTTCATCAATGGGCACCCCATACA
JMSF016F13+ GGTCATCATCAAGAATATCCCTATTAGCAGCAGCAATTTCATCAATGGGCACCCCATACA
                      ____________________________________________________________
consensus GGTCATCATCAAGAATATCCCTATTAGCAGCAGCAATTTCATCAATGGGCACCCCATACA
 
. : . : . : . : . : . :
rJMSF016F13- GCTTTGAGATTGTACTCAAATTTTCACCT
JMSF016F13+ GCTTTGAGATTGTACTCAAATTTTCACCTTCTTTCACGACATGAACAGAGATTTTCTTGA
                      ____________________________________________________________
consensus GCTTTGAGATTGTACTCAAATTTTCACCTTCTTTCACGACATGAACAGAGATTTTCTTGA
 
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JMSF016F13+ ATTGGCGTCGGCCCTTTGCAGAAAGCTCCTGAATCTGGCATTTCCATCTCACAGCAAGAA
                      ____________________________________________________________
consensus ATTGGCGTCGGCCCTTTGCAGAAAGCTCCTGAATCTGGCATTTCCATCTCACAGCAAGAA
 
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JMSF016F13+ CTGGGAAGTGTTTGTGAATGGAAATTGCGACGAAAAGGGATGTCGAGGAAGCTGGAAGAT
                      ____________________________________________________________
consensus CTGGGAAGTGTTTGTGAATGGAAATTGCGACGAAAAGGGATGTCGAGGAAGCTGGAAGAT
 
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JMSF016F13+ GGGGTTGACTCAGCTTCAGTTCCATACAGAATCAGCGAATCACCATAAACCATTAACGCC
                      ____________________________________________________________
consensus GGGGTTGACTCAGCTTCAGTTCCATACAGAATCAGCGAATCACCATAAACCATTAACGCC