| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019O16 | Sequence | 575 | 005030 (5) | ref|XP_009602601.1| | 3e-26 | PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Nicotiana | 744 | 005651 (5) | gb|AHN63210.1| | 1e-76 | transcription factor TGA2 [Salvia miltiorrhiza f. alba] |
| JMSF003O03 | Sequence | 334 | 005030 (5) | 780 | 005651 (5) | gb|AHN63210.1| | 4e-87 | transcription factor TGA2 [Salvia miltiorrhiza f. alba] | |||
| JMSF016B13 | Sequence | 518 | 005030 (5) | ref|XP_009602601.1| | 1e-24 | PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Nicotiana | 793 | 005651 (5) | gb|AHN63210.1| | 5e-87 | transcription factor TGA2 [Salvia miltiorrhiza f. alba] |
| JMSF016E12 | Sequence | 519 | 005030 (5) | ref|XP_009602601.1| | 5e-25 | PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Nicotiana | 795 | 005651 (5) | gb|AHN63210.1| | 2e-90 | transcription factor TGA2 [Salvia miltiorrhiza f. alba] |
| JMSF025M24 | Sequence | 644 | 005030 (5) | ref|XP_009602601.1| | 2e-27 | PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Nicotiana | 817 | 005651 (5) | ref|XP_009759888.1| | 2e-127 | PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1 [Nicotiana sylve |
This contig is upended
. : . : . : . : . : . :
JMSF025M24+ ATTCTCATGATGAGTAGTACCAGATAGAGGAACTTGATTTGTCGGTA
____________________________________________________________
consensus ATTCTCATGATGAGTAGTACCAGATAGAGGAACTTGATTTGTCGGTA
. : . : . : . : . : . :
JMSF025M24+ TTCCTCTTTGCAACTGAAGTGCCTGGGATCCGGTAGCAGCAGCAGACAAACTTGTGCTTA
JMFF019O16+ GGGATCCGGTAGCAGCAGCAGACAAACTTGTGCTTA
____________________________________________________________
consensus TTCCTCTTTGCAACTGAAGTGCCTGGGATCCGGTAGCAGCAGCAGACAAACTTGTGCTTA
. : . : . : . : . : . :
JMSF025M24+ GAGAAGCAAGATTCTTGTTCAGTGCTCCAGACACATCAGTGCCCATTAATGAATTAGTTC
JMFF019O16+ GAGAAGCAAGATTCTTGTTCAGTGCTCCAGACACATCAGTGCCCATTAATGAATTAGTTC
____________________________________________________________
consensus GAGAAGCAAGATTCTTGTTCAGTGCTCCAGACACATCAGTGCCCATTAATGAATTAGTTC
. : . : . : . : . : . :
JMSF025M24+ CAGATGTTGAACTTAAAAGGGGCCTTCGACTAGGATTAGCACCATCTCCAATTCGGAAAC
JMSF016B13+ CCATCTCCAATTCGGAAAC
JMFF019O16+ CAGATGTTGAACTTAAAAGGGGCCTTCGACTAGGATTAGCACCATCTCCAATTCGGAAAC
JMSF016E12+ CCATCTCCAATTCGGAAAC
____________________________________________________________
consensus CAGATGTTGAACTTAAAAGGGGCCTTCGACTAGGATTAGCACCATCTCCAATTCGGAAAC
. : . : . : . : . : . :
JMSF025M24+ CAAGATATTGCTCAAGCACCCCAAAATCAGATATAACTGGATTCTGCGTAGTGTTCCCTT
JMSF016B13+ CAAGATATTGCTCAAGCACCCCAAAATCAGATATAACTGGATTCTGCGTAGTGTTCCCTT
JMFF019O16+ CAAGATATTGCTCAAGCACCCCAAAATCAGATATAACTGGATTCTGCGTAGTGTTCCCTT
JMSF016E12+ CAAGATATTGCTCAAGCACCCCAAAATCAGATATAACTGGATTCTGCGTAGTGTTCCCTT
____________________________________________________________
consensus CAAGATATTGCTCAAGCACCCCAAAATCAGATATAACTGGATTCTGCGTAGTGTTCCCTT
. : . : . : . : . : . :
JMSF025M24+ CTGTGCCCATAGGATTGGAAACTGGTGTTTGAGAAATGAAGCTTGGCATCCCAGCAGTGA
JMSF003O03+ AAACTGGTGTTTGAGAAATGAAGCTTGGCATCCCAGCAGTGA
JMSF016B13+ CTGTGCCCATAGGATTGGAAACTGGTGTTTGAGAAATGAAGCTTGGCATCCCAGCAGTGA
JMFF019O16+ CTGTGCCCATAGGATTGGAAACTGGTGTTTGAGAAATGAAGCTTGGCATCCCAGCAGTGA
JMSF016E12+ CTGTGCCCATAGGATTGGAAACTGGTGTTTGAGAAATGAAGCTTGGCATCCCAGCAGTGA
____________________________________________________________
consensus CTGTGCCCATAGGATTGGAAACTGGTGTTTGAGAAATGAAGCTTGGCATCCCAGCAGTGA
. : . : . : . : . : . :
JMSF025M24+ CAATCTTATTACCTTCCCTACCAACCTTCAGTGTGGAACTACCATCCATGAACCAACCAT
JMSF003O03+ CAATCTTATTACCTTCCCTACCAACCTTCAGTGTGGAACTACCATCCATGAACCAACCAT
JMSF016B13+ CAATCTTATTACCTTCCCTACCAACCTTCAGTGTGGAACTACCATCCATGAACCAACCAT
JMFF019O16+ CAATCTTATTACCTTCCCTACCAACCTTCAGTGTGGAACTACCATCCATGAACCAACCAT
JMSF016E12+ CAATCTTATTACCTTCCCTACCAACCTTCAGTGTGGAACTACCATCCATGAACCAACCAT
____________________________________________________________
consensus CAATCTTATTACCTTCCCTACCAACCTTCAGTGTGGAACTACCATCCATGAACCAACCAT
. : . : . : . : . : . :
JMSF025M24+ CCTCAAAGTTTTACAGTTCCCACAACTCAAAATCAAGAAATCTCCAGTCGACTTTGAGCT
JMSF003O03+ CCTCAAAGTTTTACAGTTCCCACAACTCAAAATCAAGAAATCTCCAGTCGACTTTGAGCT
JMSF016B13+ CCTCAAAGTTTTACAGTTCCCACAACTCAAAATCAAGAAATCTCCAGTCGACTTTGAGCT
JMFF019O16+ CCTCAAAGTTTTACAGTTCCCACAACTCAAAATCAAGAAATCTCCAGTCGACTTTGAGCT
JMSF016E12+ CCTCAAAGTTTTACAGTTCCCACAACTCAAAATCAAGAAATCTCCAGTCGACTTTGAGCT
____________________________________________________________
consensus CCTCAAAGTTTTACAGTTCCCACAACTCAAAATCAAGAAATCTCCAGTCGACTTTGAGCT
. : . : . : . : . : . :
JMSF025M24+ AGACGCTGAGAGTGAGTACAAGTTTACAAGGGTGAAGAAAGCATGAAACTGAGATGAATT
JMSF003O03+ AGACGCTGAGAGTGAGTACAAGTTTACAAGGGTGAAGAAAGCATGAAACTGAGATGAATT
JMSF016B13+ AGACGCTGAGAGTGAGTACAAGTTTACAAGGGTGAAGAAAGCATGAAACTGAGATGAATT
JMFF019O16+ AGACGCTGAGAGTGAGTACAAGTTTACAAGGGTGAAGAAAGCATGAAACTGAGATGAATT
JMSF016E12+ AGACGCTGAGAGTGAGTACAAGTTTACAAGGGTGAAGAAAGCATGAAACTGAGATGAATT
____________________________________________________________
consensus AGACGCTGAGAGTGAGTACAAGTTTACAAGGGTGAAGAAAGCATGAAACTGAGATGAATT
. : . : . : . : . : . :
JMSF025M24+ TAGATTCGAAAAGATTGGGGTTGGGTGGAGTGAAGAACATGATGTTCATCTAGAAGTCTC
JMSF003O03+ TAGATTCGAAAAGATTGGGGTTGGGTGGAGTGAAGAACATGATGTTCATCTAGAAGTCTC
JMSF016B13+ TAGATTCGAAAAGATTGGGGTTGGGTGGAGTGAAGAACATGATGTTCATCTAGAAGTCTC
JMFF019O16+ TAGATTCGAAAAGATTGGGGTTGGGTGGAGTGAAGAACATGATGTTCATCTAGAAGTCTC
JMSF016E12+ TAGATTCGAAAAGATTGGGGTTGGGTGGAGTGAAGAACATGATGTTCATCTAGAAGTCTC
____________________________________________________________
consensus TAGATTCGAAAAGATTGGGGTTGGGTGGAGTGAAGAACATGATGTTCATCTAGAAGTCTC
. : . : . : . : . : . :
JMSF025M24+ CCTCTTCCTTCCCCACCTCCGAATACATTTTGTGCACAAAATTCCACTGACCCAGC
JMSF003O03+ CCTCTTCCTTCCCCACCTCCGAATACATTTTGTGCAC
JMSF016B13+ CCTCTTCCTTCCCCACCTCCGAATACATTTTGTGCACAAAATTCCACTGACCCAGC
JMFF019O16+ CCTCTTCCTTCCCCACCTCCGAATACATTTTGTGCACAAAATTCCACTGACCCAGC
JMSF016E12+ CCTCTTCCTTCCCCACCTCCGAATACATTTTGTGCACAAAATTCCACTGACCCAGCAGCC
____________________________________________________________
consensus CCTCTTCCTTCCCCACCTCCGAATACATTTTGTGCACAAAATTCCACTGACCCAGCAGCC