Contig 005028:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036E18Sequence481005028 (4)ref|XP_010105485.1|5e-38hypothetical protein L484_010269 [Morus notabilis] gb|EXC04841.1| hypothetical p
JMFS042B02Sequence365005028 (4)emb|CDP02577.1|2e-27unnamed protein product [Coffea canephora]
JMSF015O01Sequence205005028 (4)819005028 (4)ref|XP_011074376.1|3e-18PREDICTED: uncharacterized protein At2g23090 [Sesamum indicum]

Alignment

This contig is upended


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JMFN036E18+                           AACTGATAGGTTGATGGGCTAACTATATTAGCAAACAGGGCCAA
                      ____________________________________________________________
consensus                             AACTGATAGGTTGATGGGCTAACTATATTAGCAAACAGGGCCAA
 
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JMFN036E18+           TATAAACATATTTAACAAGAGATTTCAGGTAACAATCTGACAGTTTTGAGCAATGATCTA
                      ____________________________________________________________
consensus             TATAAACATATTTAACAAGAGATTTCAGGTAACAATCTGACAGTTTTGAGCAATGATCTA
 
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JMFN036E18+           AGCAGAAAAACCAGAAACATCAGCTACATCATGGTGACATGTCATAATACAGGCAGGAGA
                      ____________________________________________________________
consensus             AGCAGAAAAACCAGAAACATCAGCTACATCATGGTGACATGTCATAATACAGGCAGGAGA
 
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JMFN036E18+           AAGACAATAATGTTGTTCACTCATTTCTTGAGATGAGGGAAACATGTGTAGACATCAGCT
JMFS042B02+                               TCATTTCTTGAGATGAGGGAAACATGTGTAGACATCAGCT
rJMSF015O01-                              TCATTTCTTGAGATGAGGGAAACATGTGTAGACATCAGCT
                      ____________________________________________________________
consensus             AAGACAATAATGTTGTTCACTCATTTCTTGAGATGAGGGAAACATGTGTAGACATCAGCT
 
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JMFN036E18+           TTGGGATGCTTTGCCTCAGCATGCTCTCTGCATTTCACCTCTGAAGTAGTGCACATGAAT
JMFS042B02+           TTGGGATGCTTTGCCTCAGCATGCTCTCTGCATTTCACCTCTGAAGTAGTGCACATGAAT
rJMSF015O01-          TTGGGATGCTTTGCCTCAGCATGCTCTCTGCATTTCACCTCTGAAGTAGTGCACATGAAT
                      ____________________________________________________________
consensus             TTGGGATGCTTTGCCTCAGCATGCTCTCTGCATTTCACCTCTGAAGTAGTGCACATGAAT
 
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JMFN036E18+           GTCTGCATACATACCTTGCACTG                                     
JMFS042B02+           GTCTGCATACATACCTTGCACTGGATGTTCATCGCCTTCTTGTT                
rJMSF015O01-          GTCTGCATACATACCTTGCACTGCATGCATCACAACCACCAAAATCATTAGGCTCTGATC
                      ____________________________________________________________
consensus             GTCTGCATACATACCTTGCACTGGATGTTTCTCGCCTTCTTGTTTCATTAGGCTCTGATC
 
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rJMSF015O01-          TCTTCATTACATGAAATAAAAATTGTAACTGGGCAACCCCAACCAAGTCAGTCAGTTGTT
                      ____________________________________________________________
consensus             TCTTCATTACATGAAATAAAAATTGTAACTGGGCAACCCCAACCAAGTCAGTCAGTTGTT
 
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rJMSF015O01-          GGCTTAGTAACTCTCAGTGAGAACGGCCTATATTGGCCTTTTAGTTTGAGCCGGTCAGGC
                      ____________________________________________________________
consensus             GGCTTAGTAACTCTCAGTGAGAACGGCCTATATTGGCCTTTTAGTTTGAGCCGGTCAGGC
 
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rJMSF015O01-          GGTCTGCTATGGGCCAGGGTTGGTTTACCTCATTGTGGTCCTTTGACGGCTAGGTGATAA
                      ____________________________________________________________
consensus             GGTCTGCTATGGGCCAGGGTTGGTTTACCTCATTGTGGTCCTTTGACGGCTAGGTGATAA
 
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rJMSF015O01-          GGCGGGTTGCCCTTTGCAAGAATCTTTTCAGGGCTGCTGCCCTTACCAGAAAGAAATAGT
                      ____________________________________________________________
consensus             GGCGGGTTGCCCTTTGCAAGAATCTTTTCAGGGCTGCTGCCCTTACCAGAAAGAAATAGT
 
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rJMSF015O01-          GGTGAAATGAGTTTTACCACAGTTTAGTTACAGTCAAAACAGCAGAGAAGTTTCTAGAGC
                      ____________________________________________________________
consensus             GGTGAAATGAGTTTTACCACAGTTTAGTTACAGTCAAAACAGCAGAGAAGTTTCTAGAGC
 
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rJMSF015O01-          TCAGCTGAAATGGTGAATCCCCATCAGATAAAAAATGGTAAATTTGATAAAACCTTACCT
                      ____________________________________________________________
consensus             TCAGCTGAAATGGTGAATCCCCATCAGATAAAAAATGGTAAATTTGATAAAACCTTACCT
 
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rJMSF015O01-          GGATGTTCATCGCCTTCTTGTTAGTTTCAAGCTGACTTCCCTTAGCAGCAGCTTTCATCT
                      ____________________________________________________________
consensus             GGATGTTCATCGCCTTCTTGTTAGTTTCAAGCTGACTTCCCTTAGCAGCAGCTTTCATCT
 
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rJMSF015O01-          TTTCCATGTTCCTTTCACGAGCNGTCTTCGACTTCTGGCCGTTCCCTCCCCCCATGCCTC
JMSF015O01+                                              TGGCCGTTCCCTCCCCCCACGCCTC
                      ____________________________________________________________
consensus             TTTCCATGTTCCTTTCACGAGCNGTCTTCGACTTCTGGCCGTTCCCTCCCCCCATGCCTC
 
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rJMSF015O01-          TCTCTCTCTCTCTCTCTCTCTCTCTC                                  
JMSF015O01+           TCTCTCTCTCTCTCTCTCTCTCTCTCCAAGAAATCAAGAATCGATAAAGGCTTTAGGTTT
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTCTCTCTCTCTCTCCAAGAAATCAAGAATCGATAAAGGCTTTAGGTTT
 
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JMSF015O01+           GCCTCTCAGAAGTGTCATAGTTGTGTTCGTATATATATATAGTGTGAGGCTGTTTCTAAG
                      ____________________________________________________________
consensus             GCCTCTCAGAAGTGTCATAGTTGTGTTCGTATATATATATAGTGTGAGGCTGTTTCTAAG
 
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JMSF015O01+           AGGGATGGTTTGGACTGGGAAAAGATTTTGACTATCATATCGGTAACACTAAATGAGTCC
                      ____________________________________________________________
consensus             AGGGATGGTTTGGACTGGGAAAAGATTTTGACTATCATATCGGTAACACTAAATGAGTCC