Contig 005025:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015H23Sequence282005025 (4)ref|XP_004228642.1|9e-35PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum]846012580 (4)ref|XP_008221466.1|2e-102PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum
JMSF016P13Sequence455005025 (4)ref|XP_004228642.1|8e-70PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum]740012580 (4)ref|XP_008221466.1|3e-89PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum
JMSF017N17Sequence444005025 (4)ref|XP_004228642.1|2e-67PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum]754012580 (4)ref|XP_008221466.1|3e-89PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum
JMSF024H21Sequence666005025 (4)ref|XP_004228642.1|9e-118PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum]804012580 (4)ref|XP_008221466.1|2e-116PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF024H21+ TCCAGACGTTT
                      ____________________________________________________________
consensus TCCAGACGTTT
 
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JMSF024H21+ CCCACCATACAAGCGGAATGCACGAGATGAAACAGCTGACATTGCCCATCCAAGCGCTGA
                      ____________________________________________________________
consensus CCCACCATACAAGCGGAATGCACGAGATGAAACAGCTGACATTGCCCATCCAAGCGCTGA
 
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JMSF024H21+ TGAATCCACGTCTTGGCCTTCGAAAGGATGATGATCACGTTCTACGTTACTGAGTTCATT
                      ____________________________________________________________
consensus TGAATCCACGTCTTGGCCTTCGAAAGGATGATGATCACGTTCTACGTTACTGAGTTCATT
 
. : . : . : . : . : . :
JMSF024H21+ CACTACAAATTTCTCAAATTCCAGAAGAAACCGACATCTCTTGTTTACCTGATAAAGAAG
                      ____________________________________________________________
consensus CACTACAAATTTCTCAAATTCCAGAAGAAACCGACATCTCTTGTTTACCTGATAAAGAAG
 
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JMSF017N17+ CCAGGAAAGAAAATAGGAACGCTATACTT
JMSF024H21+ CGGGGCATATTGCAGGTTCTTTATATCTTCTCCAGGAAAGAAAATAGGAACGCTATACTT
JMSF016P13+ CCAGGAAAGAAAATAGGAACGCTATACTT
                      ____________________________________________________________
consensus CGGGGCATATTGCAGGTTCTTTATATCTTCTCCAGGAAAGAAAATAGGAACGCTATACTT
 
. : . : . : . : . : . :
JMSF017N17+ TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
JMSF024H21+ TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
JMSF016P13+ TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
                      ____________________________________________________________
consensus TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
 
. : . : . : . : . : . :
JMSF017N17+ GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
JMSF024H21+ GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
JMSF016P13+ GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
                      ____________________________________________________________
consensus GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
 
. : . : . : . : . : . :
JMSF017N17+ AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
JMSF024H21+ AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
JMSF016P13+ AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
JMSF015H23+ GACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
                      ____________________________________________________________
consensus AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
 
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JMSF017N17+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
JMSF024H21+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
JMSF016P13+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
JMSF015H23+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
                      ____________________________________________________________
consensus GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
 
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JMSF017N17+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
JMSF024H21+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
JMSF016P13+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
JMSF015H23+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
                      ____________________________________________________________
consensus GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
 
. : . : . : . : . : . :
JMSF017N17+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
JMSF024H21+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
JMSF016P13+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
JMSF015H23+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
                      ____________________________________________________________
consensus GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
 
. : . : . : . : . : . :
JMSF017N17+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGC
JMSF024H21+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGC
JMSF016P13+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGC
JMSF015H23+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGCATACTTCC
                      ____________________________________________________________
consensus TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGCATACTTCC