| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF015H23 | Sequence | 282 | 005025 (4) | ref|XP_004228642.1| | 9e-35 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 846 | 012580 (4) | ref|XP_008221466.1| | 2e-102 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
| JMSF016P13 | Sequence | 455 | 005025 (4) | ref|XP_004228642.1| | 8e-70 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 740 | 012580 (4) | ref|XP_008221466.1| | 3e-89 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
| JMSF017N17 | Sequence | 444 | 005025 (4) | ref|XP_004228642.1| | 2e-67 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 754 | 012580 (4) | ref|XP_008221466.1| | 3e-89 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
| JMSF024H21 | Sequence | 666 | 005025 (4) | ref|XP_004228642.1| | 9e-118 | PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum] | 804 | 012580 (4) | ref|XP_008221466.1| | 2e-116 | PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1 [Prunus mum |
This contig is upended
. : . : . : . : . : . :
JMSF024H21+ TCCAGACGTTT
____________________________________________________________
consensus TCCAGACGTTT
. : . : . : . : . : . :
JMSF024H21+ CCCACCATACAAGCGGAATGCACGAGATGAAACAGCTGACATTGCCCATCCAAGCGCTGA
____________________________________________________________
consensus CCCACCATACAAGCGGAATGCACGAGATGAAACAGCTGACATTGCCCATCCAAGCGCTGA
. : . : . : . : . : . :
JMSF024H21+ TGAATCCACGTCTTGGCCTTCGAAAGGATGATGATCACGTTCTACGTTACTGAGTTCATT
____________________________________________________________
consensus TGAATCCACGTCTTGGCCTTCGAAAGGATGATGATCACGTTCTACGTTACTGAGTTCATT
. : . : . : . : . : . :
JMSF024H21+ CACTACAAATTTCTCAAATTCCAGAAGAAACCGACATCTCTTGTTTACCTGATAAAGAAG
____________________________________________________________
consensus CACTACAAATTTCTCAAATTCCAGAAGAAACCGACATCTCTTGTTTACCTGATAAAGAAG
. : . : . : . : . : . :
JMSF017N17+ CCAGGAAAGAAAATAGGAACGCTATACTT
JMSF024H21+ CGGGGCATATTGCAGGTTCTTTATATCTTCTCCAGGAAAGAAAATAGGAACGCTATACTT
JMSF016P13+ CCAGGAAAGAAAATAGGAACGCTATACTT
____________________________________________________________
consensus CGGGGCATATTGCAGGTTCTTTATATCTTCTCCAGGAAAGAAAATAGGAACGCTATACTT
. : . : . : . : . : . :
JMSF017N17+ TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
JMSF024H21+ TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
JMSF016P13+ TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
____________________________________________________________
consensus TTCCGGAAGATTGCTGATGTATGGCCACCAAAAAGAACCTTTTCTTGATCTTTCTTGCAG
. : . : . : . : . : . :
JMSF017N17+ GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
JMSF024H21+ GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
JMSF016P13+ GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
____________________________________________________________
consensus GAGCTTCAAACCCAATTTCATAGCCCATAGCTCCTCAGGGACTTGTTGAGCCAGTTTAGG
. : . : . : . : . : . :
JMSF017N17+ AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
JMSF024H21+ AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
JMSF016P13+ AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
JMSF015H23+ GACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
____________________________________________________________
consensus AATGGGAGAATCAGCTTCGACCGTACCAAATTGCAGCGGGAGATGCTCCGGGAGGGCAAT
. : . : . : . : . : . :
JMSF017N17+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
JMSF024H21+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
JMSF016P13+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
JMSF015H23+ GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
____________________________________________________________
consensus GAGATCAGACCCTTTGGGGATATCATCAGAAGCAACGACGCCTAGGCCATAGGGCTCTGA
. : . : . : . : . : . :
JMSF017N17+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
JMSF024H21+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
JMSF016P13+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
JMSF015H23+ GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
____________________________________________________________
consensus GATTGCGATCTTCACCGACGGGTGCACGAACCCACCTTCTCTCTTGACCCATTTGATGAG
. : . : . : . : . : . :
JMSF017N17+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
JMSF024H21+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
JMSF016P13+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
JMSF015H23+ GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
____________________________________________________________
consensus GTCCGGCGGCTGCGTGGCCAGCCTCGAAGAATAGAGGGTGGCGGAGACGGCGGCGCAGGT
. : . : . : . : . : . :
JMSF017N17+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGC
JMSF024H21+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGC
JMSF016P13+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGC
JMSF015H23+ TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGCATACTTCC
____________________________________________________________
consensus TAGAGGGCGGAGGTGTGTGAGCGAGGCAGCCATTAGCGTCATCTTAGTCGGCATACTTCC