Contig 005021:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017E15Sequence592005021 (7)ref|XP_009803019.1|7e-75PREDICTED: long chain acyl-CoA synthetase 2 isoform X1 [Nicotiana sylvestris]690012476 (7)ref|XP_006365488.1|1e-72PREDICTED: long chain acyl-CoA synthetase 2-like isoform X1 [Solanum tuberosum]
JMFF039F19Sequence512005021 (7)ref|XP_009803019.1|1e-62PREDICTED: long chain acyl-CoA synthetase 2 isoform X1 [Nicotiana sylvestris]646012476 (7)ref|XP_006365488.1|3e-86PREDICTED: long chain acyl-CoA synthetase 2-like isoform X1 [Solanum tuberosum]
JMFF050A24Sequence586005021 (7)ref|XP_009803019.1|1e-74PREDICTED: long chain acyl-CoA synthetase 2 isoform X1 [Nicotiana sylvestris]618012476 (7)ref|XP_006365488.1|2e-68PREDICTED: long chain acyl-CoA synthetase 2-like isoform X1 [Solanum tuberosum]
JMFS037B07Sequence608005021 (7)ref|XP_009618633.1|2e-60PREDICTED: long chain acyl-CoA synthetase 2 [Nicotiana tomentosiformis]
JMFS074B04Sequence623005021 (7)ref|XP_009803020.1|2e-108PREDICTED: long chain acyl-CoA synthetase 2 isoform X2 [Nicotiana sylvestris]
JMSF012G07Sequence244005021 (7)ref|XP_009803020.1|1e-24PREDICTED: long chain acyl-CoA synthetase 2 isoform X2 [Nicotiana sylvestris]720012476 (7)ref|XP_006365488.1|1e-110PREDICTED: long chain acyl-CoA synthetase 2-like isoform X1 [Solanum tuberosum]
JMSF014P16Sequence461005021 (7)ref|XP_009803020.1|2e-71PREDICTED: long chain acyl-CoA synthetase 2 isoform X2 [Nicotiana sylvestris]781024511gb|ADV02770.1|5e-39WCOR413-like cold acclimation protein [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS074B04+ AAAGCAAGCTACACCGAGTTCTTCAGCTTCCTTTCTCTTCTCGGTGG
                      ____________________________________________________________
consensus AAAGCAAGCTACACCGAGTTCTTCAGCTTCCTTTCTCTTCTCGGTGG
 
. : . : . : . : . : . :
JMFS074B04+ AAATATTTCCAAAGCTTACAATAGTTTTCAGATGTGAAATACATCTCGGCAAGCACGTTA
                      ____________________________________________________________
consensus AAATATTTCCAAAGCTTACAATAGTTTTCAGATGTGAAATACATCTCGGCAAGCACGTTA
 
. : . : . : . : . : . :
JMFS074B04+ ATATAGCCGGTATCTTGTTCTCTTGAACAAACGCTATTGACAGCTCAGCATGGTTTATGA
JMFF039F19+ ACAAACGCTATTGACAGCTCAGCATGGTTTATGA
                      ____________________________________________________________
consensus ATATAGCCGGTATCTTGTTCTCTTGAACAAACGCTATTGACAGCTCAGCATGGTTTATGA
 
. : . : . : . : . : . :
JMFS074B04+ TGAACTCCACTGCATTTGCGCCAAGTGTATCATATAATGGTACATAGGAAATGGCTTGGC
JMFF039F19+ TGAACTCCACTGCATTTGCGCCAAGTGTATCATATAATGGTACATAGGAAATGGCTTGGC
JMSF014P16+ CGCCAAGTGTATCATATAATGGTACATAGGAAATGGCTTGGC
                      ____________________________________________________________
consensus TGAACTCCACTGCATTTGCGCCAAGTGTATCATATAATGGTACATAGGAAATGGCTTGGC
 
. : . : . : . : . : . :
JMFS074B04+ TGTTGCAAGCCTCCATTGCCATTATCCATTCCGGAGAGTTAGTACCATATATGCCACACT
JMFF017E15+ CCTCCATTGCCATTATCCATTCCGGAGAGTTAGTACCATATATGCCACACT
JMFF039F19+ TGTTGCAAGCCTCCATTGCCATTATCCATTCCGGAGAGTTAGTACCATATATGCCACACT
JMFF050A24+ CCTCCATTGCCATTATCCATTCCGGAGAGTTAGTACCATATATGCCACACT
JMFS037B07+ CCTCCATTGCCATTATCCATTCCGGAGAGTTAGTACCATATATGCCACACT
JMSF014P16+ TGTTGCAAGCCTCCATTGCCATTATCCATTCCGGAGAGTTAGTACCATATATGCCACACT
                      ____________________________________________________________
consensus TGTTGCAAGCCTCCATTGCCATTATCCATTCCGGAGAGTTAGTACCATATATGCCACACT
 
. : . : . : . : . : . :
JMFS074B04+ TATCACCAGGGTTGACACCGCATTTTCGGATAGCAGAGCCAA-TTTTTTTGGCAGTATTG
JMFF017E15+ TATCACCAGGGTTGACACCGCATTTTCGGATAGCAGAGCCAA-TTTTTTTGGCAGTATTG
JMFF039F19+ TATCACCAGGGTTGACACCGCATTTTCGGATAGCAGAGCCAA-TTTTTTTGGCAGTATTG
JMFF050A24+ TATCACCAGGGTTGACACCGCATTTTCGGATAGCAGAGCCAATTTTTTTTGGCAGTATTG
JMFS037B07+ TATCACCAGGGTTGACACCGCATTTTCGGATAGCAGAGCCAA-TTTTTTTGGCAGTATTG
JMSF014P16+ TATCACCAGGGTTGACACCGCATTTTCGGATAGCAGAGCCAA-TTTTTTTGGCAGTATTG
                      ____________________________________________________________
consensus TATCACCAGGGTTGACACCGCATTTTCGGATAGCAGAGCCAA-TTTTTTTGGCAGTATTG
 
. : . : . : . : . : . :
JMFS074B04+ TAAGACTCTTCATATGTCATCCAGACATAGGAACCTGCCTTCTTGTCAGTAATCTGACGG
JMFF017E15+ TAAGACTCTTCATATGTCAT-CAGACATAGGAACCTGCCTTCTTGTCAGTAATCTGACGG
JMFF039F19+ TAAGACTCTTCATATGTCAT-CAGACATAGGAACCTGCCTTCTTGTCAGTAATCTGACGG
JMFF050A24+ TAAGACTCTTCATATGTCATCCAGACATAGGAACCTGCCTTCTTGTCAGTAATCTGACGG
JMFS037B07+ TAAGACTCTTCATATGTCATCCAGACATAGGAACCTGCCTTCTTGTCAGTAATCTGACGG
JMSF014P16+ TAAGACTCTTCATATGTCATCCAGACATAGGAACCTGCCTTCTTGTCAGTAATCTGACGG
                      ____________________________________________________________
consensus TAAGACTCTTCATATGTCATCCAGACATAGGAACCTGCCTTCTTGTCAGTAATCTGACGG
 
. : . : . : . : . : . :
JMFS074B04+ CGACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
JMFF017E15+ CGACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
JMFF039F19+ CGACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
JMFF050A24+ CGACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
JMFS037B07+ CGACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
JMSF012G07+ GACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
JMSF014P16+ CGACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
                      ____________________________________________________________
consensus CGACCAAGCATCGGGTTTTTTGGGTATTTCTTGACAGAGTTACTGAAGAAGTCCCAGGGA
 
. : . : . : . : . : . :
JMFS074B04+ GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
JMFF017E15+ GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
JMFF039F19+ GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
JMFF050A24+ GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
JMFS037B07+ GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
JMSF012G07+ GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
JMSF014P16+ GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
                      ____________________________________________________________
consensus GACTCCAATCCAGCAGGCATTTCCATGAGAGCATCTTTAGCATAAATGCACCTATACACA
 
. : . : . : . : . : . :
JMFS074B04+ GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
JMFF017E15+ GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
JMFF039F19+ GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
JMFF050A24+ GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
JMFS037B07+ GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
JMSF012G07+ GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
JMSF014P16+ GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
                      ____________________________________________________________
consensus GGTCCTGCAGACGGCTTCCCATCCCCAGCAGGCTTACCTTCTTCAACTTTCACCACATAA
 
. : . : . : . : . : . :
JMFS074B04+ TCTGCCATTTCAGCCTCAAAATCAGAAAACCAGAAAA
JMFF017E15+ TCTGCCATTTCAGCCTCAAAATCAGAAATCCAGAAAACTGGGTTCTACCAAAAGTTCACC
JMFF039F19+ TCTGCCATTTCAGCCTCAAAATCAGAAAACCAGAAAACTGGGTTCTACCAAAAGTCCACC
JMFF050A24+ TCTGCCATTTCAGCCTCAAAATCAGAAAACCAGAAAACTGGGTTCTACCAAAAGTCCACC
JMFS037B07+ T
JMSF012G07+ TCTGCCATTTCAGCCTCAAAATCAGAAAACCAGAAAACTGGGTTCTACCAAAAGTCCAC
JMSF014P16+ TCTGCCATTTCAGCCTCAAAATCAGAAAACCAGAAAACTGGGTTCTACCAAAAGTCCACC
                      ____________________________________________________________
consensus TCTGCCATTTCAGCCTCAAAATCAGAAAACCAGAAAACTGGGTTCTACCAAAAGTCCACC