Contig 005019:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014N08Sequence436005019 (2)ref|XP_009773006.1|2e-28PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27798007073 (2)ref|XP_009794352.1|4e-113PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27
JMSF046K17Sequence740005019 (2)ref|XP_009773006.1|4e-80PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27721007073 (2)ref|XP_009794346.1|1e-78PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046K17+ TGATCCATAAAAAACCCAATCGTATAATATGAATTGTTCNT
                      ____________________________________________________________
consensus TGATCCATAAAAAACCCAATCGTATAATATGAATTGTTCNT
 
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JMSF046K17+ AAGATTAGGTGTACCAGTAAAGATCTGTCCATTCCATGGCCCATGTCTAAAAGTAATATA
                      ____________________________________________________________
consensus AAGATTAGGTGTACCAGTAAAGATCTGTCCATTCCATGGCCCATGTCTAAAAGTAATATA
 
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JMSF046K17+ TTTATTTACACCCCTGTAAAGAAAAAGTTGAGGGAATCCATCAACATCCAGCATTTCTGT
                      ____________________________________________________________
consensus TTTATTTACACCCCTGTAAAGAAAAAGTTGAGGGAATCCATCAACATCCAGCATTTCTGT
 
. : . : . : . : . : . :
JMSF046K17+ GTATTCACCTAGAGCAGGATCATCATTGCTCTTCCANGATGTCAGGCTCCAGGCGTGACC
                      ____________________________________________________________
consensus GTATTCACCTAGAGCAGGATCATCATTGCTCTTCCANGATGTCAGGCTCCAGGCGTGACC
 
. : . : . : . : . : . :
JMSF046K17+ GGNGGCTAGGTTCTNGCCAAGCTTCATGCCTGGTAGCAAAGTATTACCAGGATAATCAAA
                      ____________________________________________________________
consensus GGNGGCTAGGTTCTNGCCAAGCTTCATGCCTGGTAGCAAAGTATTACCAGGATAATCAAA
 
. : . : . : . : . : . :
JMSF046K17+ ACTCTGCCAGGCGGAATNTTNGGAANTATGGTCATTTCCCTCTCTCACAATAAGATTTCC
                      ____________________________________________________________
consensus ACTCTGCCAGGCGGAATNTTNGGAANTATGGTCATTTCCCTCTCTCACAATAAGATTTCC
 
. : . : . : . : . : . :
JMSF046K17+ TGTGTCTGAAAGCTGAGCCACTGGATTTTTCATGGATATTGATGAATTCGATGACCAGAT
                      ____________________________________________________________
consensus TGTGTCTGAAAGCTGAGCCACTGGATTTTTCATGGATATTGATGAATTCGATGACCAGAT
 
. : . : . : . : . : . :
JMSF046K17+ TTCTTCATNGCTACCATCTAGGAGTACTAGGATCCCATTGTCTTTGAGCATTAGCTTGCC
JMSF014N08+ TGAGCATTAGCTTGCC
                      ____________________________________________________________
consensus TTCTTCATNGCTACCATCTAGGAGTACTAGGATCCCATTGTCTTTGAGCATTAGCTTGCC
 
. : . : . : . : . : . :
JMSF046K17+ AAAAGTGTTGTTTAGCGGAGTTTCTCTGTTTGCAACCCAGACCACATCCTTAGTTGGTAT
JMSF014N08+ AAAAGTGTTGTTTAGCGGAGTTTCTCTGTTTGCAACCCAGACCACATCCTTAGTTGGTAT
                      ____________________________________________________________
consensus AAAAGTGTTGTTTAGCGGAGTTTCTCTGTTTGCAACCCAGACCACATCCTTAGTTGGTAT
 
. : . : . : . : . : . :
JMSF046K17+ CTTGCTGTACCAAATGCCAACATATCGATTCTTGGACTTTCCAGGGCTGAAAAATCCAAG
JMSF014N08+ CTTGCTGTACCAAATGCCAACATATCGATTCTTGGACTTTCCAGGGCTGAAAAATCCAAG
                      ____________________________________________________________
consensus CTTGCTGTACCAAATGCCAACATATCGATTCTTGGACTTTCCAGGGCTGAAAAATCCAAG
 
. : . : . : . : . : . :
JMSF046K17+ TTCAAAGTTTCCACCAGCTGAAACTATGGTAGTGCCATCTGTGATGGGATGATCTGTTGT
JMSF014N08+ TTCAAAGTTTCCACCAGCTGAAACTATGGTAGTGCCATCTGTGATGGGATGATCTGTTGT
                      ____________________________________________________________
consensus TTCAAAGTTTCCACCAGCTGAAACTATGGTAGTGCCATCTGTGATGGGATGATCTGTTGT
 
. : . : . : . : . : . :
JMSF046K17+ TATGGTGTCTACTGAGGTGCAAAGTGTGAATAGAGATAGTAAAATGGAGCAAAAGAAATA
JMSF014N08+ TATGGTGTCTACTGAGGTGCAAAGTGTGAATAGAGATAGTAAAATGGAGCAAAAGAAATA
                      ____________________________________________________________
consensus TATGGTGTCTACTGAGGTGCAAAGTGTGAATAGAGATAGTAAAATGGAGCAAAAGAAATA
 
. : . : . : . : . : . :
JMSF046K17+ GAGCCCTTGCCCTTCCATTGANTTCATTTTCTGTTTT
JMSF014N08+ GAGCCCTTGCCCTTCCATTGATTTCATTTTCTGTTTTCCCAGATTTTATGCTTGAAGTTT
                      ____________________________________________________________
consensus GAGCCCTTGCCCTTCCATTGATTTCATTTTCTGTTTTCCCAGATTTTATGCTTGAAGTTT
 
. : . : . : . : . : . :
JMSF014N08+ ATAAATCTTGTACAGGGTAAAAAAGCTAATGATGTTCAGAAATCAGCGACTTTGACAAAA
                      ____________________________________________________________
consensus ATAAATCTTGTACAGGGTAAAAAAGCTAATGATGTTCAGAAATCAGCGACTTTGACAAAA
 
. : . : . : . : . : . :
JMSF014N08+ AGGAAAAGCAAGTGGTCAATGGGCAATGGCACTCTTGTTTCTTGAAAGAAGAGATTCTTC
                      ____________________________________________________________
consensus AGGAAAAGCAAGTGGTCAATGGGCAATGGCACTCTTGTTTCTTGAAAGAAGAGATTCTTC