Contig 005012:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004J23Sequence578005012 (8)ref|XP_009800603.1|3e-60PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris]
JMFF018P07Sequence356005012 (8)ref|XP_006306517.1|2e-12hypothetical protein CARUB_v10012516mg [Capsella rubella] gb|EOA39415.1| hypothe202008492 (6)emb|CAA09458.1|2e-19hypothetical protein [Cicer arietinum]
JMFS046G07Sequence643005012 (8)ref|XP_009608744.1|1e-82PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana tomentosiformis
JMSF013F08Sequence299005012 (8)708008492 (6)ref|XP_006362549.1|2e-101PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum]
JMSF013M11Sequence477005012 (8)ref|XP_009800603.1|4e-31PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris]686008492 (6)ref|XP_009800603.1|2e-116PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris]
JMSF017D16Sequence436005012 (8)ref|XP_006362549.1|5e-24PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum]724008492 (6)ref|XP_006362549.1|1e-100PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum]
JMSF024L13Sequence663005012 (8)ref|XP_009800603.1|1e-76PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris]701008492 (6)ref|XP_009800603.1|6e-117PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris]
JMSF044I07Sequence719005012 (8)ref|XP_009608744.1|1e-90PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana tomentosiformis704008492 (6)ref|XP_006362549.1|8e-101PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF024L13+                                                                   GGTG
JMFS046G07+                                         GAAACGTCCAACGATTGACACTGCTTGGTG
JMSF044I07+           TCGTACAGACACGTATTGTTCCTGCACTCCGAAACGTCCAACGATTGACACTGCTTGGTG
                      ____________________________________________________________
consensus             TCGTACAGACACGTATTGTTCCTGCACTCCGAAACGTCCAACGATTGACACTGCTTGGTG
 
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JMSF024L13+           TCGCATGACAGAGGCGAGTATGTAGAAGACTTAACCGGGTCGAAAATCGGGTCGGCCTGC
JMFS046G07+           TCGCATGACAGAGGCGAGTATGTAGAAGACTTATCCGGGTCGAAAATCGGGTCGGCCTGC
JMSF044I07+           TCGCATGACAGAGGCGAGTATGTAGAAGACTTAACCGGGTCGAAAATCGGGTCGGCCTGC
                      ____________________________________________________________
consensus             TCGCATGACAGAGGCGAGTATGTAGAAGACTTAACCGGGTCGAAAATCGGGTCGGCCTGC
 
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JMSF024L13+           TGGTAACAATCGGCGCAAGGAGCGCATTGAAGCCAGTTCACATCGCTCCCAGTATCGAGC
JMFS046G07+           TGGTAACAATCGGCGCAAGGAGCGCATTGAAGCCAGTTCACATCGCTCCCAGTATCGAGC
JMFF004J23+                    TCGGCGCAAGGAGCGCATTGAAGCCAGTTCACATCGCTCCCAGTATCGAGC
JMSF044I07+           TGGTAACAATCGGCGCAAGGAGCGCATTGAAGCCAGTTCACATCGCTCCCAGTATCGAGC
                      ____________________________________________________________
consensus             TGGTAACAATCGGCGCAAGGAGCGCATTGAAGCCAGTTCACATCGCTCCCAGTATCGAGC
 
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JMSF024L13+           ACCATGTAAACCTCACTCGCCGGGTGACCGATTCCAACTCGGGAGAAATACTCACCGCTA
JMFS046G07+           ACCATGTAAACCTCACTCGCCGGGTGACCGATTCCAACTCGGGAGAAATACTCACCGCTA
JMFF004J23+           ACCATGTAAACCTCACTCGCCGGGTGACCGATTCCAACTCGGGAGAAATACTCACCGCTA
JMSF044I07+           ACCATGTAAACCTCACTCGCCGGGTGACCGATTCCAACTCGGGAGAAATACTCACCGCTA
                      ____________________________________________________________
consensus             ACCATGTAAACCTCACTCGCCGGGTGACCGATTCCAACTCGGGAGAAATACTCACCGCTA
 
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JMSF024L13+           CCCTGACTCGTTCCGGAGATAATGGGCCCCTCCAGCTTCTCATCCTCGAGCTCCATCTCC
JMFS046G07+           CCCTGACTCGTTCCGGAGATAATGGGCCCCTCCAGCTTCTCATCCTCGAGCTCCATCTCC
JMFF004J23+           CCCTGACTCGTTCCGGAGATAATGGGCCCCTCCAGCTTCTCATCCTCGAGCTCCATCTCC
JMSF044I07+           CCCTGACTCGTTCCGGAGATAATGGGCCCCTCCAGCTTCTCATCCTCGAGCTCCATCTCC
JMSF017D16+                                                 CTCATCCTCGAGCTCCATCTCC
JMSF013M11+             CTGACTCGTTCCGGAGATAATGGGCCCCTCCAGCTTCTCATCCTCGAGCTCCATCTCC
                      ____________________________________________________________
consensus             CCCTGACTCGTTCCGGAGATAATGGGCCCCTCCAGCTTCTCATCCTCGAGCTCCATCTCC
 
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JMSF024L13+           ATAGGCTTCAGATCCGCCTTCGTTATCCCGTTAACCGCCAGATCTAGCCGAGTCTGAAGC
JMFS046G07+           ATAGGCTTCAGATCCGCCTTCGTTATCCCGTTAACCGCCAGATCTAGCCGAGTCTGAAGC
JMFF004J23+           ATAGGCTTCAGATCCGCCTTCGTTATCCCGTTAACCGCCAGATCTAGCCGAGTCTGAAGC
JMSF044I07+           ATAGGCTTCAGATCCGCCTTCGTTATCCCGTTAACCGCCAGATCTAGCCGAGTCTGAAGC
JMSF017D16+           ATAGGCTTCAGATCCGCCTTCGTTATCCCGTTAACCGCCAGATCTAGCCGAGTCTGAAGC
JMFF018P07+                                                                   AAGC
JMSF013M11+           ATAGGCTTCAGATCCGCCTTCGTTATCCCGTTAACCGCCAGATCTAGCCGAGTCTGAAGC
                      ____________________________________________________________
consensus             ATAGGCTTCAGATCCGCCTTCGTTATCCCGTTAACCGCCAGATCTAGCCGAGTCTGAAGC
 
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JMSF024L13+           GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
JMFS046G07+           GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
JMFF004J23+           GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
JMSF044I07+           GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
JMSF017D16+           GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
JMFF018P07+           GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
JMSF013M11+           GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
                      ____________________________________________________________
consensus             GACTGTACTCTGGCCGAGTCACGCTCGAGTCGAGCCAAAGTTAGCGACTTGTAATCTCTC
 
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JMSF024L13+           TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
JMFS046G07+           TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
JMFF004J23+           TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
JMSF044I07+           TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
JMSF017D16+           TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
JMFF018P07+           TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
JMSF013M11+           TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
JMSF013F08+            CCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
                      ____________________________________________________________
consensus             TCCGAGGTTCCCCGAACAGCCAATCGAGAATGTAGCGGAAGAGAGAACGCAGACGGAGAA
 
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JMSF024L13+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
JMFS046G07+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
JMFF004J23+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
JMSF044I07+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
JMSF017D16+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
JMFF018P07+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
JMSF013M11+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
JMSF013F08+           GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
                      ____________________________________________________________
consensus             GAAAACTCCCATTTCTGACTTTCAACTGACTTCTCGGCTTGAAAACCGAGGGGGGAGAAC
 
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JMSF024L13+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
JMFS046G07+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
JMFF004J23+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
JMSF044I07+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
JMSF017D16+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
JMFF018P07+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
JMSF013M11+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
JMSF013F08+           ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
                      ____________________________________________________________
consensus             ACAGTGAGTGTTTTGTGTATCGAGGACGGAATATCGAGCGACGTCGTTCTTGGGTTTTCT
 
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JMSF024L13+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
JMFS046G07+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
JMFF004J23+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
JMSF044I07+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
JMSF017D16+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
JMFF018P07+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
JMSF013M11+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
JMSF013F08+           GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
                      ____________________________________________________________
consensus             GAGATCACCCGAGAGAGAACTGGAGAAGTAAGGCAAAGAGTGAAGAAGAAGAAGCAGAGA
 
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JMSF024L13+           ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGCGATGTGAGA    
JMFS046G07+           ATATAAGAAAGAT                                               
JMFF004J23+           ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGC             
JMSF044I07+           ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGCGATGTGAGA    
JMSF017D16+           ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGCGATGT        
JMFF018P07+           ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGCGATGT        
JMSF013M11+           ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGCGATGTGAGA    
JMSF013F08+           ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGCGATGTGAGACTGC
                      ____________________________________________________________
consensus             ATATAAGAAAGATTCGCCATTGCTCAAGTGAGAAAAGAAACAGTTGCGATGTGAGACTGC