| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011O05 | Sequence | 610 | 005011 (7) | ref|XP_002512528.1| | 1e-94 | importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat | 119 | 009679 (7) | |||
| JMFF029A01 | Sequence | 486 | 005011 (7) | ref|XP_002512528.1| | 4e-65 | importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat | 756 | 009679 (7) | ref|XP_007031183.1| | 3e-98 | Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform |
| JMFF041E14 | Sequence | 644 | 005011 (7) | ref|XP_002512528.1| | 3e-103 | importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat | 586 | 021311 | ref|XP_007031183.1| | 9e-45 | Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform |
| JMFS134C01 | Sequence | 625 | 005011 (7) | ref|XP_002512528.1| | 7e-84 | importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat | |||||
| JMSF012F04 | Sequence | 250 | 005011 (7) | ref|XP_002512528.1| | 5e-16 | importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat | 774 | 009679 (7) | ref|XP_007031183.1| | 3e-98 | Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform |
| JMSF013B24 | Sequence | 207 | 005011 (7) | ref|XP_009796205.1| | 6e-05 | PREDICTED: importin subunit alpha-1 [Nicotiana sylvestris] | 768 | 009679 (7) | ref|XP_007031183.1| | 3e-97 | Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform |
| JMSF053O15 | Sequence | 692 | 005011 (7) | ref|XP_002512528.1| | 1e-107 | importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat | 777 | 009679 (7) | ref|XP_007031183.1| | 5e-118 | Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform |
This contig is upended
. : . : . : . : . : . :
JMSF053O15+ ATTGAGCTAGCAATGGCAAGAGTGCACCATACCAAGAACCAGATCCC
____________________________________________________________
consensus ATTGAGCTAGCAATGGCAAGAGTGCACCATACCAAGAACCAGATCCC
. : . : . : . : . : . :
JMFF041E14+ ACAGGTTGGAGAATCACCAGCCACATTTCCCAAGGCCCAGACTGCCTGCTCACGAACAT
JMFF011O05+ AAGGCCCAGACTGCCTGCTCACGAACAT
JMSF053O15+ TACAGGTNGGAGAATCACCAGCCACATTTCCCAAGGCCCAGACTGCCTGCTCACGAACAT
____________________________________________________________
consensus TACAGGTTGGAGAATCACCAGCCACATTTCCCAAGGCCCAGACTGCCTGCTCACGAACAT
. : . : . : . : . : . :
JMFF041E14+ CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
JMFF011O05+ CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
JMSF053O15+ CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
JMFS134C01+ AAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
____________________________________________________________
consensus CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
. : . : . : . : . : . :
JMFF041E14+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
JMFF029A01+ TGCCCAAGCAGCTTCAAATT
JMFF011O05+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
JMSF053O15+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
JMFS134C01+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
____________________________________________________________
consensus CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
. : . : . : . : . : . :
JMFF041E14+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMFF029A01+ GCAATTGGGGTAAGTCATTTCTNTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMFF011O05+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMSF053O15+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMFS134C01+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
____________________________________________________________
consensus GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
. : . : . : . : . : . :
JMFF041E14+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMFF029A01+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMFF011O05+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMSF053O15+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMFS134C01+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
____________________________________________________________
consensus TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
. : . : . : . : . : . :
JMFF041E14+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMFF029A01+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMFF011O05+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMSF053O15+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMFS134C01+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
____________________________________________________________
consensus TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
. : . : . : . : . : . :
JMFF041E14+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMFF029A01+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMFF011O05+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMSF012F04+ AGAAGCATCAAGAACATGCTGGGACT
JMSF053O15+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMFS134C01+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
____________________________________________________________
consensus ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
. : . : . : . : . : . :
JMFF041E14+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMFF029A01+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMFF011O05+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMSF012F04+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCNTGATCTCCA
JMSF053O15+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMFS134C01+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGATCTTCCTGATCTCCA
____________________________________________________________
consensus GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
. : . : . : . : . : . :
JMFF041E14+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMFF029A01+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMFF011O05+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMSF012F04+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMSF053O15+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMFS134C01+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMSF013B24+ TCGGCATCCACTCCGATCTTGTACGACT
____________________________________________________________
consensus CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
. : . : . : . : . : . :
JMFF041E14+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMFF029A01+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMFF011O05+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMSF012F04+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMSF053O15+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMFS134C01+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMSF013B24+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
____________________________________________________________
consensus TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
. : . : . : . : . : . :
JMFF041E14+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMFF029A01+ TTCTCTG
JMFF011O05+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMSF012F04+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMSF053O15+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMFS134C01+ TTCTCTGCAATCAAAGTGTTCGACGAAATTCCCAACAGATACAATCAGAAAAAAAAATGA
JMSF013B24+ TTCTCTGCAATCAAAGTGTTCGACGAAATTCCCAACAGATACAATCAGAAAAAAAAATG-
____________________________________________________________
consensus TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACCAATCAGAAAAAAAAATGA
. : . : . : . : . : . :
JMFS134C01+ AAAAAAATCGAATGGGTTTTGAATCCTAGAGATTGAAAGCAGGA
JMSF013B24+ AAAAAAATCGAATGGGTTTTGAATCCTAGAGATTGAAAGCAGGAGAGGTTATCGTGCCTC
____________________________________________________________
consensus AAAAAAATCGAATGGGTTTTGAATCCTAGAGATTGAAAGCAGGAGAGGTTATCGTGCCTC