Contig 005007:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS080E04+                                    TACAGCACTAACTACATAATCCGCATGTTCAATGC
                      ____________________________________________________________
consensus                                      TACAGCACTAACTACATAATCCGCATGTTCAATGC
 
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JMFS080E04+           TGTGTTCTACAATAGGCTCTTCTGATTCCTCCTCTAGTTGTTTTCTGAAGAACTCATCAT
                      ____________________________________________________________
consensus             TGTGTTCTACAATAGGCTCTTCTGATTCCTCCTCTAGTTGTTTTCTGAAGAACTCATCAT
 
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JMFS080E04+           CATCGTCTGGTTGTGGTGATGCATTTAAGTCCATGCTGGCAATCATTCAAGATGCACCAT
JMSF019D16+                                                          CAAGATGCACCAT
                      ____________________________________________________________
consensus             CATCGTCTGGTTGTGGTGATGCATTTAAGTCCATGCTGGCAATCATTCAAGATGCACCAT
 
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JMFS080E04+           GACACATATACCAATAAGTGGCTAACAAATTTATTATGATTTATCAGCAATGCCACAGTG
JMSF019D16+           GACACATATACCAATAAGTGGCTAACAAATTTATTATGATTTATCAGCAATGCCACAGTG
                      ____________________________________________________________
consensus             GACACATATACCAATAAGTGGCTAACAAATTTATTATGATTTATCAGCAATGCCACAGTG
 
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JMFS080E04+           AGACTACCTTCCGAGTCCCACAAGCCAATGAATTCCAACTCCCAGTGAAACGTTTGAACC
JMSF019D16+           AGACTACCTTCCGAGTCCCACAAGCCAATGAATTCCAACTCCCAGTGAAACGTTTGAACC
                      ____________________________________________________________
consensus             AGACTACCTTCCGAGTCCCACAAGCCAATGAATTCCAACTCCCAGTGAAACGTTTGAACC
 
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JMFS080E04+           CAAGGACAAAAATTTGTATATGTATTACAGACCCCTCTATGAAAAAATAAAAACCCTATA
JMSF019D16+           CAAGGACAAAAATTTGTATATGTATTACAGACCCCTCTATGAAAAAATAAAAACCCTATA
JMSF012D04+                                      CAGACCCCTCTATGAAAAAATAAAANCCCTATA
                      ____________________________________________________________
consensus             CAAGGACAAAAATTTGTATATGTATTACAGACCCCTCTATGAAAAAATAAAAACCCTATA
 
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JMFS080E04+           TAATTGAGGTGAAAAAGCAAGAATCTTAATCAGCAGAATTTCAGTTTCCAAAACCCTAGA
JMSF019D16+           TAATTGAGGTGAAAAAGCAAGAATCTTAATCAGCAGAATTTCAGTTTCCAAAACCCTAGA
JMSF012D04+           TAATTGAGGTGAAAAAGCAAGAATCTTAATCAGCAGAATTTCAGTTTCCAAAACCCTAGA
                      ____________________________________________________________
consensus             TAATTGAGGTGAAAAAGCAAGAATCTTAATCAGCAGAATTTCAGTTTCCAAAACCCTAGA
 
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JMFS080E04+           GACAAAAGCCCCGCTGTTATAGAGAGTTAAAGAGACGAGGAGATCGCATAGATTTTGTTG
JMSF019D16+           GACAAAAGCCCCGCTGTTATAGAGAGTTAAAGAGACGAGGAGATCGCATAGATTTTGTTG
JMSF012D04+           GACAAAAGCCCCGCTGTTATAGAGAGTTAAAGAGACGAGGAGATCGCATAGATTTTGTTG
                      ____________________________________________________________
consensus             GACAAAAGCCCCGCTGTTATAGAGAGTTAAAGAGACGAGGAGATCGCATAGATTTTGTTG
 
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JMFS080E04+           CAGCTGTTCAATCCAGGTTTAGAACGAGAACCCATTCAAGAGAGGGGGGAAAATCAGAAA
JMSF019D16+           CAGCTGTTCAATCCAGGTTTAGAACGAGAACCCATTCAAGAGAGGGGGGAAAATCAGAAA
JMSF012D04+           CAGCTGTTCAATCCAGGTTTAGAACGAGAACCCATTCAAGAGAGGGGGGAAAATCAG-AA
                      ____________________________________________________________
consensus             CAGCTGTTCAATCCAGGTTTAGAACGAGAACCCATTCAAGAGAGGGGGGAAAATCAGAAA
 
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JMFS080E04+           AAAAATGGGGGAAATTATTATGGGAAAAAAGAGAGATACATGTTGTGTACGTATATGTGA
JMSF019D16+           AAAAATGGGGGAAATTATTATGGGAAAAAAGAGAGATACATGTTGTGTACGTATATGTGA
JMSF012D04+           AAAAATGGGGGAAATTATTATGGGAAAAAAGAGAGATACATGTTGTGTACGTATATGTGA
                      ____________________________________________________________
consensus             AAAAATGGGGGAAATTATTATGGGAAAAAAGAGAGATACATGTTGTGTACGTATATGTGA
 
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JMFS080E04+           GAATTCATGAATCGGTTGGAGAGAAGTGAGAAGGGA                        
JMSF019D16+           GAATTCATGAATCGGTTGGAGAGAAGTGAGAAGGGAGATTGGGCGAGGGTTGCGAAC   
JMSF012D04+           GAATTCATGAATCGGTTGGAGAGAAGTGAGAAGGGAGATTGGGCGAGGGTTGCGAACGTC
                      ____________________________________________________________
consensus             GAATTCATGAATCGGTTGGAGAGAAGTGAGAAGGGAGATTGGGCGAGGGTTGCGAACGTC