Contig 005003:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS036H05+                                                                    ATG
                      ____________________________________________________________
consensus                                                                      ATG
 
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JMFS036H05+           ATCAGACTCCCTATCACCCAGGCCTAAATCCGGCACATCCGTCCCAAACTCCTTCAAAAC
                      ____________________________________________________________
consensus             ATCAGACTCCCTATCACCCAGGCCTAAATCCGGCACATCCGTCCCAAACTCCTTCAAAAC
 
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JMFS036H05+           CGCAGCCTTTTTATGTTCCCCGACAAGAACCCCCGGAGGTTTCACAAACCCGGTGGCGCG
                      ____________________________________________________________
consensus             CGCAGCCTTTTTATGTTCCCCGACAAGAACCCCCGGAGGTTTCACAAACCCGGTGGCGCG
 
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JMFS036H05+           TCCCGTTCTGGAAACCTCCAGCTCCGTCCCGACCACCTTATCGGCTCCCAAGAAGTTCAC
                      ____________________________________________________________
consensus             TCCCGTTCTGGAAACCTCCAGCTCCGTCCCGACCACCTTATCGGCTCCCAAGAAGTTCAC
 
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JMFS036H05+           GGCGAAGTGCTCCACCATGATCCTAGGATTCGCGGTGAATACGTACCGCTTCCCGCATGA
                      ____________________________________________________________
consensus             GGCGAAGTGCTCCACCATGATCCTAGGATTCGCGGTGAATACGTACCGCTTCCCGCATGA
 
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JMFS036H05+           ACTGAACACCTTCCAGGCATCCGCGCGGACATCCTCGGAGTAGAACCTGGGCAGCACCGC
JMSF011F03+                               CCGCGCGGACATCNTCGGAGTAGAACCTGGGCAGCACCGC
                      ____________________________________________________________
consensus             ACTGAACACCTTCCAGGCATCCGCGCGGACATCCTCGGAGTAGAACCTGGGCAGCACCGC
 
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JMFS036H05+           CCGAGACACGGTCTCGATGTCCTTGACCTTGAGCCCGGCGAAGGAGACGAAGATGAAGGC
JMSF011F03+           CCGAGACACGGTCTCGATGTCCTTGACCTTGAGCCCGGCGAAGGAGACGAAGATGAAGGC
                      ____________________________________________________________
consensus             CCGAGACACGGTCTCGATGTCCTTGACCTTGAGCCCGGCGAAGGAGACGAAGATGAAGGC
 
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JMFS036H05+           TTTGATGGCTAAGGGCTCGGACACGAAGAGGTGGAGGGAGTAGACGAAGGGGACGGAGAC
JMSF011F03+           TTTGATGGCTAAGGGCTCGGACACGAAGAGGTGGAGGGAGTAGACGAAGGGGACGGAGAC
                      ____________________________________________________________
consensus             TTTGATGGCTAAGGGCTCGGACACGAAGAGGTGGAGGGAGTAGACGAAGGGGACGGAGAC
 
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JMFS036H05+           GAGGAGGAGGAGTGCCCGGAGGAGGCTGCCGGCTTCCATGGCGACGAGGAGGAAGTAGGG
JMSF011F03+           GAGGAGGAGGAGTGCCCGGAGGAGGCTGCCGGCTTCCATGGCGACGAGGAGGAAGTAGGG
                      ____________________________________________________________
consensus             GAGGAGGAGGAGTGCCCGGAGGAGGCTGCCGGCTTCCATGGCGACGAGGAGGAAGTAGGG
 
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JMFS036H05+           GAATGCGGTGGCGGAGAGCAAGAGTGTGCCGTCTAAATCAGCCACCACGGTTTGGTTTGA
JMSF011F03+           GAATGCGGTGGCGGAGAGCAAGAGTGTGCCGTCTAAATCAGCCACCACGGTTTGGTTTGA
                      ____________________________________________________________
consensus             GAATGCGGTGGCGGAGAGCAAGAGTGTGCCGTCTAAATCAGCCACCACGGTTTGGTTTGA
 
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JMFS036H05+           CCGCCCCTCTGGGCTGCATTTT                                      
JMSF011F03+           CCGCCCCTCTGGGCTGCATTTTGAGATTGGTTCGAAATGAAGATGGCGATGGCGAGCCCC
                      ____________________________________________________________
consensus             CCGCCCCTCTGGGCTGCATTTTGAGATTGGTTCGAAATGAAGATGGCGATGGCGAGCCCC
 
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JMSF011F03+           CATGTTTGGATCGGAGTGATAGGTAGTTTTTGGTGTTGGGTTGGTTTTAACGTGTGTGTC
                      ____________________________________________________________
consensus             CATGTTTGGATCGGAGTGATAGGTAGTTTTTGGTGTTGGGTTGGTTTTAACGTGTGTGTC