Contig 005002:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002B21Sequence566005002 (6)emb|CDP06456.1|1e-61unnamed protein product [Coffea canephora]684005002 (6)ref|XP_008388854.1|2e-93PREDICTED: LOW QUALITY PROTEIN: pyruvate decarboxylase 1 [Malus domestica]
JMFF015D17Sequence567005002 (6)emb|CDP06456.1|2e-73unnamed protein product [Coffea canephora]513012274 (5)gb|KJB36954.1|3e-78hypothetical protein B456_006G184000 [Gossypium raimondii] gb|KJB36956.1| hypoth
JMFF015D22Sequence561005002 (6)emb|CDP06456.1|2e-73unnamed protein product [Coffea canephora]704012274 (5)gb|KJB36954.1|2e-125hypothetical protein B456_006G184000 [Gossypium raimondii] gb|KJB36956.1| hypoth
JMFF016A21Sequence571005002 (6)emb|CDP06456.1|2e-67unnamed protein product [Coffea canephora]701012274 (5)gb|KJB36954.1|9e-105hypothetical protein B456_006G184000 [Gossypium raimondii] gb|KJB36956.1| hypoth
JMSF011E09Sequence468005002 (6)emb|CDP06456.1|2e-47unnamed protein product [Coffea canephora]791012274 (5)gb|KJB36954.1|9e-141hypothetical protein B456_006G184000 [Gossypium raimondii] gb|KJB36956.1| hypoth

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF002B21- ATGGTAATNANATTCCGATATACAGA
                      ____________________________________________________________
consensus ATGGTAATNANATTCCGATATACAGA
 
. : . : . : . : . : . :
rJMFF002B21- TGAGCAATAGTTCNATGATTACACTCTCGTAANTAAGAGTAGGAAACTTGAAAGTTGTTC
                      ____________________________________________________________
consensus TGAGCAATAGTTCNATGATTACACTCTCGTAANTAAGAGTAGGAAACTTGAAAGTTGTTC
 
. : . : . : . : . : . :
rJMFF002B21- AAGGTAGACAAGCCAATCCCCCTTTGTTATTTCCTCCCTCAACNACACTTCACAGTTTAC
                      ____________________________________________________________
consensus AAGGTAGACAAGCCAATCCCCCTTTGTTATTTCCTCCCTCAACNACACTTCACAGTTTAC
 
. : . : . : . : . : . :
rJMFF002B21- TGAGGGTTTGGGGTTAAGTGAAAATGGAACCGGTTCACGAATAAAGGTGGGATGAGGGAT
                      ____________________________________________________________
consensus TGAGGGTTTGGGGTTAAGTGAAAATGGAACCGGTTCACGAATAAAGGTGGGATGAGGGAT
 
. : . : . : . : . : . :
rJMFF002B21- CCCTGCCAAGTTACAGCCGATGCTTATGTAAACCGGCTTGCTCTCCTTCAACGCCGTCGA
                      ____________________________________________________________
consensus CCCTGCCAAGTTACAGCCGATGCTTATGTAAACCGGCTTGCTCTCCTTCAACGCCGTCGA
 
. : . : . : . : . : . :
rJMFF002B21- TATCGCCGTATCGATCAACTCGTGAGCATCTTCCNAATTGTTCACCACAGCCTGATAGCA
                      ____________________________________________________________
consensus TATCGCCGTATCGATCAACTCGTGAGCATCTTCCNAATTGTTCACCACAGCCTGATAGCA
 
. : . : . : . : . : . :
rJMFF002B21- AGTAACCGTTTGAAAGCACCGGAGCTCCTGGGTAAAATCGGGTAAACCGATAGTGTGGNG
JMFF015D17+ GGTAAAATCGGGTAAACCGATAGTGTGGTG
JMFF015D22+ GGGTAAAATCGGGTAAACCGATAGTGTGGTG
JMFF002B21+ GGGTAAAATCGGGTAAACCGATAGTGTGGTG
JMFF016A21+ GGGTAAAATCGGGTAAACCGATAGTGTGGTG
                      ____________________________________________________________
consensus AGTAACCGTTTGAAAGCACCGGAGCTCCTGGGTAAAATCGGGTAAACCGATAGTGTGGTG
 
. : . : . : . : . : . :
rJMFF002B21- GAGGATCCGGTTAGTT-CCGTANTCGTTCGAGTTGGGACCACCGACGATGCATATGANCG
JMFF015D17+ GAGGATCCGGTTAGTT-CCGTAGTCGTTCGAGTTGGGACCACCGACGATGCATATGAGCG
JMFF015D22+ GAGGATCCGGTTAGTT-CCGTAGTCGTTCGAGTTGGGACCACCGACGATGCATATGAGCG
JMFF002B21+ GAGGATCCGGTTAGTTCCCGTAGTCGTTCGAGTTGGGACCACCGACGATGCATATGAGCG
JMFF016A21+ GAGGATCCGGTTAGTT-CCGTAGTCGTTCGAGTTGGGACCACCGACGATGCATATGAGCG
                      ____________________________________________________________
consensus GAGGATCCGGTTAGTT-CCGTAGTCGTTCGAGTTGGGACCACCGACGATGCATATGAGCG
 
. : . : . : . : . : . :
rJMFF002B21- GGAGGTTTTCACTGTACGCGCCGGCGATAGCGTTGAGGACGCTAAGTCCTCCGACAGTGA
JMFF015D17+ GGAGGTTTTCACTGTACGCGCCGGCGATAGCGTTGAGGACGCTAAGTCCTCCGACAGTGA
JMFF015D22+ GGAGGTTTTCACTGTACGCGCCGGCGATAGCGTTGAGGACGCTAAGTCCTCCGACAGTGA
JMFF002B21+ GGAGGTTTTCACTGTACGCGCCGGCGATAGCGTTGAGGACGCTAAGTCCTCCGACAGTGA
JMFF016A21+ GGAGGTTTTCACTGTACGCGCCGGCGATAGCGTTGAGGACGCTAAGTCCTCCGACAGTGA
JMSF011E09+ CTGTACGCGCCGGCGATAGCGTTGAGGACGCTAAGTCNTCCGACAGTGA
                      ____________________________________________________________
consensus GGAGGTTTTCACTGTACGCGCCGGCGATAGCGTTGAGGACGCTAAGTCCTCCGACAGTGA
 
. : . : . : . : . : . :
rJMFF002B21- AAGTGACGACGCAGGCTCCAACACCGCGGGCCCGAGCATAGCCGTCGGCGGCGTATCCGG
JMFF015D17+ AAGTGACGACGCAGGCTCCAACACCGCGGGCCCGAGCATAGCCGTCGGCGGCGTATCCGG
JMFF015D22+ AAGTGACGACGCAGGCTCCAACACCGCGGGCCCGAGCATAGCCGTCGGCGGCGTATCCGG
JMFF002B21+ AAGTGACGACGCAGGCTCCAACACCGCGGGCCCGAGCATAGCCGTCGGCGGCGTATCCGG
JMFF016A21+ AAGTGACGACGCAGGCTCCAACACCGCGGGCCCGAGCATAGCCGTCGGCGGCGTATCCGG
JMSF011E09+ AAGTGACGACGCAGGCTCCAACACCGCGGGCCCGAGCATAGCCGTCGGCGGCGTATCCGG
                      ____________________________________________________________
consensus AAGTGACGACGCAGGCTCCAACACCGCGGGCCCGAGCATAGCCGTCGGCGGCGTATCCGG
 
. : . : . : . : . : . :
rJMFF002B21- CGTTGAGCTCGTTGCANCANCCGATGANTCTGAGCCCCGGCTCCGCAATGAGGTGGTCAA
JMFF015D17+ CGTTGAGCTCGTTGCAGCAGCCGATGAGTCTGAGCCCCGGCTCCGCAATGAGGTGGTCAA
JMFF015D22+ CGTTGAGCTCGTTGCAGCAGCCGATGAGTCTGAGCCCCGGCTCCGCAATGAGGTGGTCAA
JMFF002B21+ CGTTGAGCTCGTTGCAGCAGCCGATGAGTCTGAGCCCCGGCTCCGCAATGAGGTGGTCAA
JMFF016A21+ CGTTGAGCTCGTTGCAGCAGCCGATGAGTCTGAGCCCCGGCTCCGCAATGAGGTGGTCAA
JMSF011E09+ CGTTGAGCTCGTTGCAGCAGCCGATGAGTCTGAGCCCCGGCTCCGCAATGAGGTGGTCAA
                      ____________________________________________________________
consensus CGTTGAGCTCGTTGCAGCAGCCGATGAGTCTGAGCCCCGGCTCCGCAATGAGGTGGTCAA
 
. : . : . : . : . : . :
rJMFF002B21- GCAGAGTAAAGTTGAAGTCCCCGGGGACGCTGAACACGTCGGTCANCCCGATCTGGACG
JMFF015D17+ GCAGAGTAAGGTTGAAGTCCCCGGGGACGCTGAACACGTCGGTCACCCCGATCTGGACGA
JMFF015D22+ GCAGAGTAAGGTTGAAGTCCCCGGGGACGCTGAACACGTCGGTCACCCCGATCTGGACGA
JMFF002B21+ GCAGAGTAAGGTTGAAGTCCCCGGGGACGCTGAACACGTCGGTCACCCCGATCTGGACGA
JMFF016A21+ GCAGAGTAAGGTTGAAGTCCCCGGGGACGCTGAACACGTCGGTCACCCCGATCTGGACGA
JMSF011E09+ GCAGAGTAAGGTTGAAGTCCCCGGGGACGCTGAACACGTCGGTCACCCCGATCTGGACGA
                      ____________________________________________________________
consensus GCAGAGTAAGGTTGAAGTCCCCGGGGACGCTGAACACGTCGGTCACCCCGATCTGGACGA
 
. : . : . : . : . : . :
JMFF015D17+ GGCGGCGCGCGAGATGGCGGCCTAGAGTTGCCTCAGCCGAGCTGAAGGCAACGGGGGTTG
JMFF015D22+ GGCGGCGCGCGAGATGGCGGCCTAGAGTTGCCTCAGCCGAGCTGAAGGCAACGGGGGTTG
JMFF002B21+ GGCGGCGCGCGAGATGGCGGCCTAGAGTTGCCTCAGCCGAGCTGAAGGCAACGGGGGTTG
JMFF016A21+ GGCGGCGCGCGAGATGGCGGCCTAGAGTTGCCTCAGCCGAGCTGAAGGCAACGGGGGTTG
JMSF011E09+ GGCGGCGCGCGAGATGGCGGCCTAGAGTTGCCTCAGCCGAGCTGAAGGCAACGGGGGTTG
                      ____________________________________________________________
consensus GGCGGCGCGCGAGATGGCGGCCTAGAGTTGCCTCAGCCGAGCTGAAGGCAACGGGGGTTG
 
. : . : . : . : . : . :
JMFF015D17+ AGTGAACCGTATTGACGCCGATTGTCGGCGCGTTGGCGACGTCGCCGCT-CCCTGGCTTA
JMFF015D22+ AGTGAACCGTATTGACGCCGATTGTCGGCGCGTTGGCGACGTCGCCGCT-CCCTGGCTTA
JMFF002B21+ AGTGAACCGTATTGACGCCGATTGTCGGCGCGTTGGCGACGTCGCCGCT-CCCTGGCTTA
JMFF016A21+ AGTGAACCGTATTGACGCCGATTGTCGGCGCGTTGGCGACGTCGCCGCTNCCCTGGCTTA
JMSF011E09+ AGTGAACCGTATTGACGCCGATTGTCGGCGCGTTGGCGACGTCGCCGCT-CCCTGGCTTA
                      ____________________________________________________________
consensus AGTGAACCGTATTGACGCCGATTGTCGGCGCGTTGGCGACGTCGCCGCT-CCCTGGCTTA
 
. : . : . : . : . : . :
JMFF015D17+ CAAGCTTCGATTGATCCGATCTTAGTATCCATAACAGCAACAAAAGAACAGTTGAGAAAT
JMFF015D22+ CAAGCTTCGATTGATCCGATCTTAGTATCCATAACAGCAACAAAAGAACAGTTGAGAAAT
JMFF002B21+ CAAGCTTCGATTGATCCGATCTTAGTATCCATAACAGCAACAAAAGAACAGTTGAGAAAT
JMFF016A21+ CAAGCTTCGATTGATCCGATCTTAGTATCCATAACAGCAACAAAAGAACAGTTGAGAAAT
JMSF011E09+ CAAGCTTCGATTGATCCGATCTTAGTATCCATAACAGCAACAAAAGAACAGTTGAGAAAT
                      ____________________________________________________________
consensus CAAGCTTCGATTGATCCGATCTTAGTATCCATAACAGCAACAAAAGAACAGTTGAGAAAT
 
. : . : . : . : . : . :
JMFF015D17+ GGTGTAGTATCTTCCTGCTTCTTCTACAACTTTCAGTGGAAATTCGTATAGTGTG
JMFF015D22+ GGTGTAGTATCTTCCTGCTTCTTCTACAACTTTCAGTGGAAATTCGTA
JMFF002B21+ GGTGTAGTATCTTCCTGCTTCTTCTACAACTTTCAGTGGAAATTCGTATAGTGTG
JMFF016A21+ GGTGTAGTATCTTCCTGCTTCTTCTACAACTTTCAGTGGAAATTCGTATAGTGTG
JMSF011E09+ GGTGTAGTATCTTCCTGCTTCTTCTACAACTTTCAGTGGAAATTCGTATAGTGTGTGACC
                      ____________________________________________________________
consensus GGTGTAGTATCTTCCTGCTTCTTCTACAACTTTCAGTGGAAATTCGTATAGTGTGTGACC