| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028E10 | Sequence | 258 | 005001 (6) | ref|XP_002515031.1| | 8e-42 | steroid dehydrogenase, putative [Ricinus communis] gb|EEF47585.1| steroid dehydr | |||||
| JMFN002D06 | Sequence | 523 | 005001 (6) | ref|XP_009590833.1| | 3e-73 | PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1 [Nicotiana tomentosiformis | |||||
| JMFN015K21 | Sequence | 592 | 005001 (6) | ref|XP_009590833.1| | 2e-83 | PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1 [Nicotiana tomentosiformis | |||||
| JMSF011B12 | Sequence | 217 | 005001 (6) | 763 | 017090 | ref|XP_009590833.1| | 4e-30 | PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1 [Nicotiana tomentosiformis | |||
| JMSF044J18 | Sequence | 805 | 005001 (6) | ref|XP_009590833.1| | 5e-141 | PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1 [Nicotiana tomentosiformis | 795 | 005001 (6) | ref|XP_009590833.1| | 3e-122 | PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1 [Nicotiana tomentosiformis |
This contig is upended
. : . : . : . : . : . :
rJMSF044J18- TGATATTATTCTTGCTACAATATGACCTCTCAAACATAGTCAATGCAATATTCATAA
____________________________________________________________
consensus TGATATTATTCTTGCTACAATATGACCTCTCAAACATAGTCAATGCAATATTCATAA
. : . : . : . : . : . :
rJMSF044J18- AATGACAAGTATTTGTTCACTCAAGTGGTACTAATTTTTGAGGCTGAAGAAGCTAGTTGC
____________________________________________________________
consensus AATGACAAGTATTTGTTCACTCAAGTGGTACTAATTTTTGAGGCTGAAGAAGCTAGTTGC
. : . : . : . : . : . :
rJMSF044J18- ATCATCAGTTCCTGCTTCTTCCTTGAATCCTTGAGCTTTCCCTTCTTCCTGATTCCCATG
____________________________________________________________
consensus ATCATCAGTTCCTGCTTCTTCCTTGAATCCTTGAGCTTTCCCTTCTTCCTGATTCCCATG
. : . : . : . : . : . :
rJMSF044J18- CAATCCCTGAGTCGCCAGGCATCAATAGCAGAGTCGGGGAAGAAATAGACCAAAGCCCAT
____________________________________________________________
consensus CAATCCCTGAGTCGCCAGGCATCAATAGCAGAGTCGGGGAAGAAATAGACCAAAGCCCAT
. : . : . : . : . : . :
rJMFF028E10- GAATGGGGCCAATATGGGGTGCACCTTGCTTCATAACCTATCCACCGCAATGCT
rJMSF044J18- TGCAGAGAATGGGGCCAATATGGGGTGCACCTTGCTTCATAACCTATCCACCGCAATGCT
____________________________________________________________
consensus TGCAGAGAATGGGGCCAATATGGGGTGCACCTTGCTTCATAACCTATCCACCGCAATGCT
. : . : . : . : . : . :
rJMFF028E10- GCCTCCGCATACTCCTCTGTTGATGCAATAAAGAATGATGATTTCCTGATTGATATCATT
rJMSF044J18- GCCTCCGCATACTCCTCTGTTGATGCAATAAAGAATGATGATTTCCTGATTGATATCATT
JMSF044J18+ CTGTTGATGCAATAAAGAATGATGATTTCCTGATTGATATCATT
____________________________________________________________
consensus GCCTCCGCATACTCCTCTGTTGATGCAATAAAGAATGATGATTTCCTGATTGATATCATT
. : . : . : . : . : . :
rJMFF028E10- TTGGNTGCCACATATNATGGTACTTGACATTGCACATCAATTCCACTTTTGCCATACTCC
rJMSF044J18- TTGGTTGCCACATATAATGGTACTTGACATTGCACATCAATTCCACTTTTGCCATACTCC
JMSF044J18+ TTGGTTGCCACATATAATGGTACTTGACATTGCACATCAATTCCACTTTTGCCATACTCC
____________________________________________________________
consensus TTGGTTGCCACATATAATGGTACTTGACATTGCACATCAATTCCACTTTTGCCATACTCC
. : . : . : . : . : . :
rJMFF028E10- AAATAAAGGCATCTTGANAATTGATCAATGTATGCTTNGGTGGCGGCATA
rJMSF044J18- AAATAAAGGCATCTTGAGAATTGATCAATGTATGCTTTGGTGGCGGCATAAACTGCATGA
JMSF044J18+ AAATAAAGGCATCTTGAGAATTGATCAATGTATGCTTTGGTGGCGGCATAAACTGCATGA
____________________________________________________________
consensus AAATAAAGGCATCTTGAGAATTGATCAATGTATGCTTTGGTGGCGGCATAAACTGCATGA
. : . : . : . : . : . :
rJMSF044J18- AGGGGAGCTGAAGGGATAACAATGGCGGAACCGGAGCCAATATTGACAATCGCTCCTCTC
JMSF044J18+ AGGGGAGCTGAAGGGATAACAATGGCGGAACCGGAGCCAATATTGACAATCGCTCCTCTC
____________________________________________________________
consensus AGGGGAGCTGAAGGGATAACAATGGCGGAACCGGAGCCAATATTGACAATCGCTCCTCTC
. : . : . : . : . : . :
rJMSF044J18- TTCCGCCGGAGCATCCCCGGTAAAACCGCCTGAGTAACCTTAGTAGTCCCTCCCACGTTC
JMSF044J18+ TTCCGCCGGAGCATCCCCGGTAAAACCGCCTGAGTAACCTTAGTAGTCCCTCCCACGTTC
JMFN015K21+ GAGTAACCTTAGTAGTCCCTCCCACGTTC
____________________________________________________________
consensus TTCCGCCGGAGCATCCCCGGTAAAACCGCCTGAGTAACCTTAGTAGTCCCTCCCACGTTC
. : . : . : . : . : . :
rJMSF044J18- ACTTTAATCACATCGCCCAACAGCTTATCATCCACCTCGTGGAAAAACCTCGGGTACGGA
JMSF044J18+ ACTTTAATCACATCGCCCAACAGCTTATCATCCACCTCGTGGAAAAACCTCGGGTACGGA
JMFN002D06+ ATCATCCACCTCGTGGAAAAACCTCGGGTACGGA
JMFN015K21+ ACTTTAATCACATCGCCCAACAGCTTATCATCCACCTCGTGGAAAAACCTCGGGTACGGA
____________________________________________________________
consensus ACTTTAATCACATCGCCCAACAGCTTATCATCCACCTCGTGGAAAAACCTCGGGTACGGA
. : . : . : . : . : . :
rJMSF044J18- TAACAAACACCCACGTTGTTAATCAACACTCCGACGTCAAGCCCCTCGATCGCCTCTCGG
JMSF044J18+ TAACAAACACCCACGTTGTTAATCAACACTCCGACGTCAAGCCCCTCGATCGCCTCTCGG
JMFN002D06+ TAACAAACACCCACGTTGTTAATCAACACTCCGACGTCAAGCCCCTCGATCGCCTCTCGG
JMFN015K21+ TAACAAACACCCACGTTGTTAATCAACACTCCGACGTCAAGCCCCTCGATCGCCTCTCGG
____________________________________________________________
consensus TAACAAACACCCACGTTGTTAATCAACACTCCGACGTCAAGCCCCTCGATCGCCTCTCGG
. : . : . : . : . : . :
rJMSF044J18- ATTCTCCGAACCCCGTCGTCCAAGTCGCCGGAAAAATCCACCACCACACTCTTCACCTGG
JMSF044J18+ ATTCTCCGAACCCCGTCGTCCAAGTCGCCGGAAAAATCCACCACCACACTCTTCACCTGG
JMFN002D06+ ATTCTCCGAACCCCGTCGTCCAAGTCGCCGGAAAAATCCACCACCACACTCTTCACCTGG
JMFN015K21+ ATTCTCCGAACCCCGTCGTCCAAGTCGCCGGAAAAATCCACCACCACACTCTTCACCTGG
____________________________________________________________
consensus ATTCTCCGAACCCCGTCGTCCAAGTCGCCGGAAAAATCCACCACCACACTCTTCACCTGG
. : . : . : . : . : . :
rJMSF044J18- ATCTGCCCATACTTGGCC
JMSF044J18+ ATCTGCCCATACTTGGCCTTTATCCCACCGGAAACGTCTCTCAGCTTCTCCGGATTCCGG
JMFN002D06+ ATCTGCCCATACTTGGCCTTTATCCCACCGGAAACGTCTCTCAGCTTCTCCGGATTCCGG
JMFN015K21+ ATCTGCCCATACTTGGCCTTTATCCCACCGGAAACGTCTCTCAGCTTCTCCGGATTCCGG
____________________________________________________________
consensus ATCTGCCCATACTTGGCCTTTATCCCACCGGAAACGTCTCTCAGCTTCTCCGGATTCCGG
. : . : . : . : . : . :
JMSF044J18+ CCCACCAGAACTACGTTCAGCCCCTTACGAGCTAACTGGAAAGCAAAGGCTTTTCCGATG
JMFN002D06+ CCCACCAGAACTACGTTCAGCCCCTTACGAGCTAACTGGAAAGCAAAGGCTTTTCCGATG
JMFN015K21+ CCCACCAGAACTACGTTCAGCCCCTTACGAGCTAACTGGAAAGCAAAGGCTTTTCCGATG
____________________________________________________________
consensus CCCACCAGAACTACGTTCAGCCCCTTACGAGCTAACTGGAAAGCAAAGGCTTTTCCGATG
. : . : . : . : . : . :
JMSF044J18+ CCGTCGGTAGCTCCGGTTACCAGCGCCCAGGAGCCGTAATTCTTCAGATTCTTGGCCGGC
JMFN002D06+ CCGTCGGTAGCTCCGGTTACCAGCGCCCAGGAGCCGTAATTCTTCAGATTCTTGGCCGGC
JMFN015K21+ CCGTCGGTAGCTCCGGTTACCAGCGCCCAGGAGCCGTAATTCTTCAGATTCTTGGCCGGC
____________________________________________________________
consensus CCGTCGGTAGCTCCGGTTACCAGCGCCCAGGAGCCGTAATTCTTCAGATTCTTGGCCGGC
. : . : . : . : . : . :
JMSF044J18+ CGGAGAAAGTTGGCTCGGACCCATTCCAGAATGGTTAGTGAAAAGGCGACAAGTTTGAAA
JMFN002D06+ CGGAGAAAGTTGGCTCGGACCCATTCCAGAATGGTTAGTGAAAAGGCGACAAGTTTGAAA
JMFN015K21+ CGGAGAAAGTTGGCTCGGACCCATTCCAGAATGGTTAGTGAAAAGGCGACAAGTTTGAAA
JMSF011B12+ TTCCAGAATGGTTAGTGAAAAGGCGACAAGTTTGAAA
____________________________________________________________
consensus CGGAGAAAGTTGGCTCGGACCCATTCCAGAATGGTTAGTGAAAAGGCGACAAGTTTGAAA
. : . : . : . : . : . :
JMSF044J18+ AAGCCGAGAGCTAGAAGTAGAAGAAGCCATGGCGGTTGAGATTTGAGGTGTTCATAGAAA
JMFN002D06+ AAGCCGAGAGCTAGAAGTAGAAGAAGCCATGGCGGTTGAGATTTGAGGTGTTCATAGAAA
JMFN015K21+ AAGCCGAGAGCTAGAAGTAGAAGAAGCCATGGCGGTTGAGATTTGAGGTGTTCATAGAAA
JMSF011B12+ AAGCCGAGAGCTAGAAGTAGAAGAAGCCATGGCGGTTGAGATTTGAGGTGTTCATAGAAA
____________________________________________________________
consensus AAGCCGAGAGCTAGAAGTAGAAGAAGCCATGGCGGTTGAGATTTGAGGTGTTCATAGAAA
. : . : . : . : . : . :
JMSF044J18+ CCGGTTTCCATGGCCGTCCAACAAGCACTGAAGAAACTGT
JMFN002D06+ CCGGTTTCCATGGCCGTCCAACAAGCACTGAAGAAACTGTACCCAGCGGACTCTGATGTT
JMFN015K21+ CCGGTTTCCATGGCCGTCCAACAAGCACTGAAGAAACTGTACCCAGCGGACTCTGATGTT
JMSF011B12+ CCGGTTTCCATGGCCGTCCAACAAGCACTGAAGAAACTGTACCCAGCGGACTCTGATGTT
____________________________________________________________
consensus CCGGTTTCCATGGCCGTCCAACAAGCACTGAAGAAACTGTACCCAGCGGACTCTGATGTT
. : . : . : . : . : . :
JMFN002D06+ TTCTACACG
JMFN015K21+ TTCTACACGGATCGGATATAGAA
JMSF011B12+ TTCTACACGGATCGGATATAGAAACGGCAGGGAGTGTGGTTCAGATCTAAGCTCAGATCC
____________________________________________________________
consensus TTCTACACGGATCGGATATAGAAACGGCAGGGAGTGTGGTTCAGATCTAAGCTCAGATCC