Contig 004998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037C03Sequence526004998 (4)gb|AAB39828.1|9e-61chaperonin-60 beta subunit, partial [Solanum tuberosum]
JMSF010I06Sequence288004998 (4)emb|CDO97994.1|8e-11unnamed protein product [Coffea canephora]647009914 (2)ref|XP_007024263.1|2e-54TCP-1/cpn60 chaperonin family protein [Theobroma cacao] gb|EOY26885.1| TCP-1/cpn
JMSF010N23Sequence279004998 (4)126009914 (2)
JMSF012A19Sequence226004998 (4)

Alignment

This contig is upended


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JMFF037C03+                                                            TAAATCATTTG
                      ____________________________________________________________
consensus                                                              TAAATCATTTG
 
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JMFF037C03+           TTTTTGAAGCAGCTTGCCTCACTAAACTTGCACCAATATTTTCAACAGGGTCTTCCAATT
                      ____________________________________________________________
consensus             TTTTTGAAGCAGCTTGCCTCACTAAACTTGCACCAATATTTTCAACAGGGTCTTCCAATT
 
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JMFF037C03+           CAACCTCTCTAGCTACAGTTACACCATCGTTAACAATTTTTGGAGAACCATACTTGCTCT
                      ____________________________________________________________
consensus             CAACCTCTCTAGCTACAGTTACACCATCGTTAACAATTTTTGGAGAACCATACTTGCTCT
 
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JMFF037C03+           CCAAAACAACATTTCTTCCTTTTGGCCCAAGAGTAACACCTACTAGGTCTGCAAGTTTGT
                      ____________________________________________________________
consensus             CCAAAACAACATTTCTTCCTTTTGGCCCAAGAGTAACACCTACTAGGTCTGCAAGTTTGT
 
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JMSF010I06+                                  ATAGCAGAACCATCTGTGTTGAAGTACAAGTCCTTGG
JMFF037C03+           TCACACCTGCTTGCAATTTCTTGATAGCAGAACCATCTGTGTTGAAGTACAAGTCCTTGG
                      ____________________________________________________________
consensus             TCACACCTGCTTGCAATTTCTTGATAGCAGAACCATCTGTGTTGAAGTACAAGTCCTTGG
 
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JMSF010I06+           CCATAGCCCGAACCTTAGATCTCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
JMFF037C03+           CCATAGCCCGAACCTTAGATCTCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
JMSF012A19+                                                             CCTCCTAATG
JMSF010N23+                                TCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
                      ____________________________________________________________
consensus             CCATAGCCCGAACCTTAGATCTCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
 
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JMSF010I06+           CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
JMFF037C03+           CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
JMSF012A19+           CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
JMSF010N23+           CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
                      ____________________________________________________________
consensus             CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
 
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JMSF010I06+           CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
JMFF037C03+           CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
JMSF012A19+           CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
JMSF010N23+           CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
                      ____________________________________________________________
consensus             CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
 
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JMSF010I06+           CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
JMFF037C03+           CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
JMSF012A19+           CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
JMSF010N23+           CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
                      ____________________________________________________________
consensus             CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
 
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JMSF010I06+           TTGGAAAGT                                                   
JMFF037C03+           TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAAT                         
JMSF012A19+           TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAAT                         
JMSF010N23+           TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAATATAGATAAGGAAGCTCAACTTCTTC
                      ____________________________________________________________
consensus             TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAATATAGATAAGGAAGCTCAACTTCTTC