Contig 004993:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF025D05+                                             AACTTTAATTTGGAAATAAACATTAA
                      ____________________________________________________________
consensus                                               AACTTTAATTTGGAAATAAACATTAA
 
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JMSF025D05+           NCACATTTTCTGTAAATAAATTATAGTTAACTTTAATTTTCTGAAAGAACAAAACTAATA
                      ____________________________________________________________
consensus             NCACATTTTCTGTAAATAAATTATAGTTAACTTTAATTTTCTGAAAGAACAAAACTAATA
 
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JMSF025D05+           ACATATTCTGGAAAAAATCTTAGTTAAATTAGTGCAAAGAAAACATTCTCATAACAATTT
                      ____________________________________________________________
consensus             ACATATTCTGGAAAAAATCTTAGTTAAATTAGTGCAAAGAAAACATTCTCATAACAATTT
 
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JMSF025D05+           TAAAAGTCTTAGAACCTTTAATTTCCTGGAAAAAAACAAAAACATAAAAATAAAAATAAA
                      ____________________________________________________________
consensus             TAAAAGTCTTAGAACCTTTAATTTCCTGGAAAAAAACAAAAACATAAAAATAAAAATAAA
 
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JMSF025D05+           AAAAAACAAAAATAGCAGATTAGCAGTAAAGTACCTGTCACTTATGTTAGGTTTTCATGG
                      ____________________________________________________________
consensus             AAAAAACAAAAATAGCAGATTAGCAGTAAAGTACCTGTCACTTATGTTAGGTTTTCATGG
 
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JMSF025D05+           CCAGGGGCAGTCACCGAAGAAGCCAAGGATATCTCCCCGGATCTAGGGTTTCCTGTGTGA
                      ____________________________________________________________
consensus             CCAGGGGCAGTCACCGAAGAAGCCAAGGATATCTCCCCGGATCTAGGGTTTCCTGTGTGA
 
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JMSF025D05+           AAGAATGAGCAGATATGAGTAGATAAAACTCTAAAAGTGCGATGTTAGAGGAGACTTACT
                      ____________________________________________________________
consensus             AAGAATGAGCAGATATGAGTAGATAAAACTCTAAAAGTGCGATGTTAGAGGAGACTTACT
 
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JMSF025D05+           GTTAAGTGAGAGTCCACGGTGAGAACCTGAGAGGGGTGAGACCATGAGCGCCGAGAAGGT
                      ____________________________________________________________
consensus             GTTAAGTGAGAGTCCACGGTGAGAACCTGAGAGGGGTGAGACCATGAGCGCCGAGAAGGT
 
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JMSF025D05+           GGAGAGCCGGAGTCGGAGTCACAGTCCCACGAAAAGGCGAAGTGACGGAGTGGTTGAGGC
JMSF010A12+             AGAGCCGGAGTCGGAGTCACAGTCCCACGAAAAGGCGAAGTGACGGAGTGGTTGAGGC
                      ____________________________________________________________
consensus             GGAGAGCCGGAGTCGGAGTCACAGTCCCACGAAAAGGCGAAGTGACGGAGTGGTTGAGGC
 
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JMSF025D05+           CTGAGAGGGTCAGATGGGTGAGAGGAAGAGTCAGAGACAAAGAGACTCCGGAGACGGTGC
JMSF010A12+           CTGAGAGGGTCAGATGGGTGAGAGGAAGAGTCAGAGACAAAGAGACTCCGGAGACGGTGC
                      ____________________________________________________________
consensus             CTGAGAGGGTCAGATGGGTGAGAGGAAGAGTCAGAGACAAAGAGACTCCGGAGACGGTGC
 
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JMSF025D05+           ATTGTTTTGGGTGATAGTCGATAGGTTTGAGGTGAGGCAGAGATGATGTCTGGTTGAGAG
JMSF010A12+           ATTGTTTTGGGTGATAGTCGATAGGTTTGAGGTGAGGCAGAGATGATGTCTGGTTGAGAG
                      ____________________________________________________________
consensus             ATTGTTTTGGGTGATAGTCGATAGGTTTGAGGTGAGGCAGAGATGATGTCTGGTTGAGAG
 
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JMSF025D05+           ACAGACAGAGAGTTTGGGGAGAGGTGTGAGAGGCACAATGAGTAAGTGAAGGTCTGCC  
JMSF010A12+           ACAGACAGAGAGTTTGGGGAGAGGTGTGAGAGGCACAATGAGTAAGTGAAGGTCTGCCTC
                      ____________________________________________________________
consensus             ACAGACAGAGAGTTTGGGGAGAGGTGTGAGAGGCACAATGAGTAAGTGAAGGTCTGCCTC