Contig 004989:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023G11Sequence622004989 (6)gb|EYU39437.1|1e-96hypothetical protein MIMGU_mgv1a0012202mg, partial [Erythranthe guttata] gb|EYU
JMFS033C01Sequence587004989 (6)gb|EYU39437.1|2e-77hypothetical protein MIMGU_mgv1a0012202mg, partial [Erythranthe guttata] gb|EYU
JMFS041F02Sequence630004989 (6)gb|EYU39437.1|2e-95hypothetical protein MIMGU_mgv1a0012202mg, partial [Erythranthe guttata] gb|EYU
JMFS072F11Sequence627004989 (6)gb|EYU39437.1|5e-94hypothetical protein MIMGU_mgv1a0012202mg, partial [Erythranthe guttata] gb|EYU
JMSF009J17Sequence400004989 (6)ref|XP_006348474.1|3e-26PREDICTED: coatomer subunit beta-1-like [Solanum tuberosum]731005618 (3)ref|XP_010432853.1|1e-72PREDICTED: coatomer subunit beta-1-like [Camelina sativa]
JMSF026G05Sequence680004989 (6)gb|EYU39437.1|8e-103hypothetical protein MIMGU_mgv1a0012202mg, partial [Erythranthe guttata] gb|EYU785005618 (3)ref|XP_010432853.1|3e-86PREDICTED: coatomer subunit beta-1-like [Camelina sativa]

Alignment

This contig is upended


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JMFS041F02+                                                      GAATTGCATTCCTCCGT
JMFS072F11+                                                              TTCCTCCGT
JMFS023G11+                                                  GCAAGAATTGCATTCCTCCGT
JMSF026G05+                       TGTGGAAGCTGGTAAACAGACATCACAGCAAGAATTGCATTCCTCCGT
                      ____________________________________________________________
consensus                         TGTGGAAGCTGGTAAACAGACATCACAGCAAGAATTGCATTCCTCCGT
 
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JMFS041F02+           ACATATGGATGTCGGTGTTCTAGGTTGCTCATGATGGAAGGAATCAGAGGCTCAATGATA
JMFS072F11+           ACATATGGATGTCGGTGTTCTAGGTTGCTCATGATGGAAGGAATCAGAGGCTCAATGATA
JMFS023G11+           ACATATGGATGTCGGTGTTCTAGGTTGCTCATGATGGAAGGAATCAGAGGCTCAATGATA
JMFS033C01+                                                   GAATCAGAGGCTCAATGATA
JMSF026G05+           ACATATGGATGTCGGTGTTCTAGGTTGCTCATGATGGAAGGAATCAGAGGCTCAATGATA
                      ____________________________________________________________
consensus             ACATATGGATGTCGGTGTTCTAGGTTGCTCATGATGGAAGGAATCAGAGGCTCAATGATA
 
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JMFS041F02+           TCAACCTCATTCAGCCGGCAAAGGAACCTCAAAGTAACTCCACGAATGTATTCGTTTGGG
JMFS072F11+           TCAACCTCATTCAGCCGGCAAAGGAACCTCAAAGTAACTCCACGAATGTATTCGTTTGGG
JMFS023G11+           TCAACCTCATTCAGCCGGCAAAGGAACCTCAAAGTAACTCCACGAATGTATTCGTTTGGG
JMFS033C01+           TCAACCTCATTCAGCCGGCAAAGGAACCTCAAAGTAACTCCACGAATGTATTCGTTTGGG
JMSF026G05+           TCAACCTCATTCAGCCGGCAAAGGAACCTCAAAGTAACTCCACGAATGTATTCGTTTGGG
                      ____________________________________________________________
consensus             TCAACCTCATTCAGCCGGCAAAGGAACCTCAAAGTAACTCCACGAATGTATTCGTTTGGG
 
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JMFS041F02+           TGCTGCAAGTTGTTCCTTAAGTTTTGGCAGATCAGAATCATCTCAGGCAGCACACGCCCC
JMFS072F11+           TGCTGCAAGTTGTTCCTTAAGTTTTGGCAGATCAGAATCATCTCAGGCAGCACACGCCCC
JMFS023G11+           TGCTGCAAGTTGTTCCTTAAGTTTTGGCAGATCAGAATCATCTCAGGCAGCACACGCCCC
JMFS033C01+           TGCTGCAAGTTGTTCCTTAAGTTTTGGCAGATCAGAATCATCTCAGGCAGCACACGCCCC
JMSF026G05+           TGCTGCAAGTTGTTCCTTAAGTTTTGGCAGATCAGAATCATCTCAGGCAGCACACGCCCC
                      ____________________________________________________________
consensus             TGCTGCAAGTTGTTCCTTAAGTTTTGGCAGATCAGAATCATCTCAGGCAGCACACGCCCC
 
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JMFS041F02+           TTGGAGTCTGTCTTATCAATGATCTCCAAATACAGCAACAGCAATTTCTGAATAGTATGA
JMFS072F11+           TTGGAGTCTGTCTTATCAATGATCTCCAAATACAGCAACAGCAATTTCTGAATAGTATGA
JMFS023G11+           TTGGAGTCTGTCTTATCAATGATCTCCAAATACAGCAACAGCAATTTCTGAATAGTATGA
JMFS033C01+           TTGGAGTCTGTCTTATCAATGATCTCCAAATACAGCAACAGCAATTTCTGAATAGTATGA
JMSF026G05+           TTGGAGTCTGTCTTATCAATGATCTCCAAATACAGCAACAGCAATTTCTGAATAGTATGA
                      ____________________________________________________________
consensus             TTGGAGTCTGTCTTATCAATGATCTCCAAATACAGCAACAGCAATTTCTGAATAGTATGA
 
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JMFS041F02+           TCCTCAGAAGGCAATACATATCTAATAATTGTTATAAATAGATGGGGTATGGTTTCGCCA
JMFS072F11+           TCCTCAGAAGGCAATACATATCTAATAATTGTTATAAATAGATGGGGTATGGTTTCGCCA
JMFS023G11+           TCCTCAGAAGGCAATACATATCTAATAATTGTTATAAATAGATGGGGTATGGTTTCGCCA
JMFS033C01+           TCCTCAGAAGGCAATACATATCTAATAATTGTTATAAATAGATGGGGTATGGTTTCGCCA
JMSF026G05+           TCCTCAGAAGGCAATACATATCTAATAATTGTTATAAATAGATGGGGTATGGTTTCGCCA
JMSF009J17+                               TCTAATAATTGTTATAAATAGATGGGGTATGGTTTCGCCA
                      ____________________________________________________________
consensus             TCCTCAGAAGGCAATACATATCTAATAATTGTTATAAATAGATGGGGTATGGTTTCGCCA
 
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JMFS041F02+           TTTAACAAAAGCAGGATGGCTTTTTTCATGGCTTCAATCTTTTCTGGAACATCATTGCCT
JMFS072F11+           TTTAACAAAAGCATGATGGCTTTTTTCATGGCTTCAATCTTTTCTGGAACATCATTGCCT
JMFS023G11+           TTTAACAAAAGCATGATGGCTTTTTTCATGGCTTCAATCTTTTCTGGAACATCATTGCCT
JMFS033C01+           TTTAACAAAAGCATGATGGCTTTTTTCATGGCTTCAATCTTTTCTGGAACATCATTGCCT
JMSF026G05+           TTTAACAAAAGCATGATGGCTTTTTTCATGGCTTCAATCTTTTCTGGAACATCATTGCCT
JMSF009J17+           TTTAACAAAAGCATGATGGCTTTTTTCATGGCTTCAATCTTTTCTGGAACATCATTGCCT
                      ____________________________________________________________
consensus             TTTAACAAAAGCATGATGGCTTTTTTCATGGCTTCAATCTTTTCTGGAACATCATTGCCT
 
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JMFS041F02+           TCTAGGGATTCCTTGATCTCATTGGCAAGAGCTGGTGTGCTCTTGTCAAAATGTATTAGC
JMFS072F11+           TCTAGGGATTCCTTGATCTCATTGGCAAGAGCTGGTGTGCTCTTGTCAAAATGTATTAGC
JMFS023G11+           TCTAGGGATTCCTTGATCTCATTGGCAAGAGCTGGTGTGCTCTTGTCAAAATGTATTAGC
JMFS033C01+           TCTAGGGATTCCTTGATCTCATTGGCAAGAGCTGGTGTGCTCAAAACAAAATGTATTAGC
JMSF026G05+           TCTAGGGATTCCTTGATCTCATTGGCAAGAGCTGGTGTGCTCTTGTCAAAATGTATTAGC
JMSF009J17+           TCTAGGGATTCCTTGATCTCATTGGCAAGAGCTGGTGTGCTCTTGTCAAAATGTATTAGC
                      ____________________________________________________________
consensus             TCTAGGGATTCCTTGATCTCATTGGCAAGAGCTGGTGTGCTCTTGTCAAAATGTATTAGC
 
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JMFS041F02+           AAAGAGCACGACTTCTCCATTTCACATTAATAACAGGATAGACTGCCGGAATGTTTTTAT
JMFS072F11+           AAAGAGCACGACTTCTCCATTTCACATTAATAACAGGATAGACTGCCGGAATGTTTTTAT
JMFS023G11+           AAAGAGCACGACTTCTCCATTTCACATTAATAACAGGATAGACTGCCGGAATGTTTTTAT
JMFS033C01+           AAATAGCACGACTTCTCCATTTCACATTAATAACAGGATAGACTGCCGGAATGTTTTTAT
JMSF026G05+           AAAGAGCACGACTTCTCCATTTCACATTAATAACAGGATAGACTGCCGGAATGTTTTTAT
JMSF009J17+           AAAGAGCACGACTTCTCCATTTCACATTAATAACAGGATAGACTGCCGGAATGTTTTTAT
                      ____________________________________________________________
consensus             AAAGAGCACGACTTCTCCATTTCACATTAATAACAGGATAGACTGCCGGAATGTTTTTAT
 
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JMFS041F02+           GGCCGGCGATGGTAGGGTGAGGTAAATGGGCGAGTTGAGAGAAGCTTTGATCGGATGCCG
JMFS072F11+           GGCCGGCGATGGTAGGGTGAGGTAAATGGGCGAGTTGAGAGAAGCTTTGATCGGATGCCG
JMFS023G11+           GGCCGGCGATGGTAGGGTGAGGTAAATGGGCGAGTTGAGAGAAGCTTTGATCGGATGCCG
JMFS033C01+           GGCCGGCGATGGTAGGGTGAGGTAAATGGGCGAGTTGAGAGAAGCTTTGATCGAGTGCCG
JMSF026G05+           GGCCGGCGATGGTAGGGTGAGGTAAATGGGCGAGTTGAGAGAAGCTTTGATCGGATGCCG
JMSF009J17+           GGCCGGCGATGGTAGGGTGAGGTAAATGGGCGAGTTGAGAGAAGCTTTGATCGGATGCCG
                      ____________________________________________________________
consensus             GGCCGGCGATGGTAGGGTGAGGTAAATGGGCGAGTTGAGAGAAGCTTTGATCGGATGCCG
 
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JMFS041F02+           GAGATCCTCAGAGTTAGAGGTATTAAATGGCCGTCGGAATAGAAGCTTTTCTCAGATCTG
JMFS072F11+           GAGATCCTCAGAGTTAGAGGTATTAAATGGCCGTCGGAATAGAAGCTTTTCTCAGATCTG
JMFS023G11+           GAGATCCTCAGAGTTAGAGGTATTAAATGGCCGTCGGAATAGAAGCTTTTCTCAGATCTG
JMFS033C01+           GAGATCCTCAGAGTTAGAGGTATTAAATGGCCGTCGGAATAGAAGCTTTTCTCAGATCTG
JMSF026G05+           GAGATCCTCAGAGTTAGAGGTATTAAATGGCCGTCGGAATAGAAGCTTTTCTCAGATCTG
JMSF009J17+           GAGATCCTCAGAGTTAGAGGTATTAAATGGCCGTCGGAATAGAAGCTTTTCTCAGATCTG
                      ____________________________________________________________
consensus             GAGATCCTCAGAGTTAGAGGTATTAAATGGCCGTCGGAATAGAAGCTTTTCTCAGATCTG
 
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JMFS041F02+           CGAGATGTCAGAT                                               
JMFS072F11+           CGAGATGTCAGAT                                               
JMFS023G11+           C                                                           
JMFS033C01+           CGAGATGTCAG                                                 
JMSF026G05+           CGAGATGTCAGATGTAGAGACGGACAGACCC                             
JMSF009J17+           CGAGATGTCAGATGTAGAGACGGACAGACCCGGAGTGTTCGTTCTTTCGTAACGACTATA
                      ____________________________________________________________
consensus             CGAGATGTCAGATGTAGAGACGGACAGACCCGGAGTGTTCGTTCTTTCGTAACGACTATA