Contig 004988:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS106D01+                 ATATATATATTTGATTTCATATATATTTTTGGACTTCAAAAGTTCATCTGCCAT
                      ____________________________________________________________
consensus                   ATATATATATTTGATTTCATATATATTTTTGGACTTCAAAAGTTCATCTGCCAT
 
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JMFS106D01+           GTCATAGATAACATCATCATTTTCTGAGGTTAGAAATATTAAGCCTAACAATTTCTTTTG
                      ____________________________________________________________
consensus             GTCATAGATAACATCATCATTTTCTGAGGTTAGAAATATTAAGCCTAACAATTTCTTTTG
 
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JMFS106D01+           CTCTGTGACATTTGTCTCACACCAGTTTTTAAAAGCATGTTAACAAATTAGTTATCCAAC
                      ____________________________________________________________
consensus             CTCTGTGACATTTGTCTCACACCAGTTTTTAAAAGCATGTTAACAAATTAGTTATCCAAC
 
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JMFS106D01+           ACAAACTTTCTTCGCGAATGTCTACTAATGCTTTTAAGGATTTCAAATGGCTTTATTTAA
                      ____________________________________________________________
consensus             ACAAACTTTCTTCGCGAATGTCTACTAATGCTTTTAAGGATTTCAAATGGCTTTATTTAA
 
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JMFS106D01+           GACAACACATAACAGTCTCCAACCTGGCTAAACCACTATAATTTCATTACCAAAAAGTCT
                      ____________________________________________________________
consensus             GACAACACATAACAGTCTCCAACCTGGCTAAACCACTATAATTTCATTACCAAAAAGTCT
 
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JMFS106D01+           CTGCATTTTTGTATTTCTTTACATATCTGTGTCATGAAAAAACTGAAGCAAATAACATGC
                      ____________________________________________________________
consensus             CTGCATTTTTGTATTTCTTTACATATCTGTGTCATGAAAAAACTGAAGCAAATAACATGC
 
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JMFS106D01+           CTGATTTTCCTTCCATAATTCCTTCATCTCAGTATAATAGCCCATACCAGACCAGGATGT
JMSF043G24+                   CCTTCCATAATTCCTTCATCTCAGTATAATAGCCCATACCAGACCAGGATGT
                      ____________________________________________________________
consensus             CTGATTTTCCTTCCATAATTCCTTCATCTCAGTATAATAGCCCATACCAGACCAGGATGT
 
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JMFS106D01+           GAAGTGCTTCCTGGCTCGATGAACAGATTCTAATTCTTGTGGAAGCTCTCTAATAATCCT
JMFS044C02+                                        CTAATTCTTGTGGAAGCTCTCTAATAATCCT
JMSF043G24+           GAAGTGCTTCCTGGCTCGATGAACAGATTCTAATTCTTGTGGAAGCTCTCTAATAATCCT
                      ____________________________________________________________
consensus             GAAGTGCTTCCTGGCTCGATGAACAGATTCTAATTCTTGTGGAAGCTCTCTAATAATCCT
 
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JMFS106D01+           GACATCTCCTTGTAACATTTGGATGAAATTGTGTTCATCAAATATAT-----------CT
JMFS044C02+           GACATCTCCTTGTAACATTTGGATGAAATTGTGTTCATCAAATATATCTGAGAAAATACT
JMSF043G24+           GACATCTCCTTGTAACATTTGGATGAAATTGTGTTCATCAAATATATCTGAGAAAATACT
                      ____________________________________________________________
consensus             GACATCTCCTTGTAACATTTGGATGAAATTGTGTTCATCAAATATATCTGAGAAAATACT
 
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JMFS106D01+           TGAATCTTGCCAGAACGAACGCTTGTCCAACTGAGGAATCACCAAAGTCGCATTCATCAT
JMFS044C02+           TGAATCTTGCCAGAACGAACGCTTGTCCAACTGAGGAATCACCAAAGTCGCATTCATCAT
JMSF043G24+           TGAATCTTGCCAGAACGAACGCTTGTCCAACTGAGGAATCACCAAAGTCGCATTCATCAT
                      ____________________________________________________________
consensus             TGAATCTTGCCAGAACGAACGCTTGTCCAACTGAGGAATCACCAAAGTCGCATTCATCAT
 
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JMFS106D01+           GTGAGCCACAGCGACCATATCAGCTATACCAGTGCGCATCTGA                 
JMFS044C02+           GTGAGCCACAGCGACCATATCAGCTATACCAGTGCGCATCTGATTTAAACCCCCATTACT
JMSF043G24+           GTGAGCCACAGCGACCATATCAGCTATACCAGTGCGCATCTGATTTAAACCCCCATTACT
                      ____________________________________________________________
consensus             GTGAGCCACAGCGACCATATCAGCTATACCAGTGCGCATCTGATTTAAACCCCCATTACT
 
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JMFS044C02+           TTTAACAGTCAAGTAGCGATCCCATCCTTGTGCAGCTTTATATCTAGAAGTAGGCTTGAC
JMSF043G24+           TTTAACAGTCAAGTAGCGATCCCATCCTTGTGCAGCTTTATATCTAGAAGTAGGCTTGAC
                      ____________________________________________________________
consensus             TTTAACAGTCAAGTAGCGATCCCATCCTTGTGCAGCTTTATATCTAGAAGTAGGCTTGAC
 
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JMFS044C02+           ACACTGGCGTAGCCCATGGCTATAAGGAGCCTCCCAGAGATGTCCATCTTCCTTCTGCTC
JMSF043G24+           ACACTGGCGTAGCCCATGGCTATAAGGAGCCTCCCAGAGATGTCCATCTTCCTTCTGCTC
                      ____________________________________________________________
consensus             ACACTGGCGTAGCCCATGGCTATAAGGAGCCTCCCAGAGATGTCCATCTTCCTTCTGCTC
 
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JMFS044C02+           GGACTCCAATAAAAAGGGAGGCTTCTGGTCATCTTCTAAGATGTCTCTACTGTAAAAACT
JMSF043G24+           GGACTCCAATAAAAAGGGAGGCTTCTGGTCATCTTCTAAGATGTCTCTACTGTAAAAACT
JMSF009C15+                                                                     CT
                      ____________________________________________________________
consensus             GGACTCCAATAAAAAGGGAGGCTTCTGGTCATCTTCTAAGATGTCTCTACTGTAAAAACT
 
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JMFS044C02+           GAAAATGAAGATCGATAAAGCAAAGAGAAGGAAAATATAGAGGGTAATTGAAAGAGGAGG
JMSF043G24+           GAAAATGAAGATCGATAAAGCAAAGAGAAGGAAAATATAGAGGGTAATTGAAAGAGGAGG
JMSF009C15+           GAAAATGAAGATCGATAAAGCAAAGAGAAGGAAAATATAGAGGGTAATTGAAAGAGGAGG
                      ____________________________________________________________
consensus             GAAAATGAAGATCGATAAAGCAAAGAGAAGGAAAATATAGAGGGTAATTGAAAGAGGAGG
 
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JMFS044C02+           TGTCCTTCGGATCCTGTTATGGTGGCTTCTACTATAGTTCGCCATTTGTTCTCCTCAATT
JMSF043G24+           TGTCCTTCGGATCCTGTTATGGTGGCTTCTACTATAGTTCGCCATTTGTTCTCCTCAATT
JMSF009C15+           TGTCCTTCGGATCCTGTTATGGTGGCTTCTACTATAGTTCGCCATTTGTTCTCCTCAATT
                      ____________________________________________________________
consensus             TGTCCTTCGGATCCTGTTATGGTGGCTTCTACTATAGTTCGCCATTTGTTCTCCTCAATT
 
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JMFS044C02+           CATTCGAAGATGTTTCATCGTATCGTTTGCGCTTTTCCTCCAACAAGTTAACATGCGGTA
JMSF043G24+           CATTCGAAGATGTTTCATCGTATCGTTTGCGCTTTTCCTCCAACAAGTTAACATGCGGTA
JMSF009C15+           CATTCGAAGATGTTTCATCGTATCGTTTGCGCTTTTCCTCCAACAAGTTAACATGCGGTA
                      ____________________________________________________________
consensus             CATTCGAAGATGTTTCATCGTATCGTTTGCGCTTTTCCTCCAACAAGTTAACATGCGGTA
 
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JMFS044C02+           TGGAGCCCCTGCTTCCCAGTTGAATCAAATTGAGAGATTTGTCA                
JMSF043G24+           TGGAGCCCCTGCTTCCCAGTTGAATCAAATTGAGAGATTTGTCAGAAATCCTGGTTGATC
JMSF009C15+           TGGAGCCCCTGCTTCCCAGTTGAATCAAATTGAGAGATTTGTCAGAAATCCTGGTTGATC
                      ____________________________________________________________
consensus             TGGAGCCCCTGCTTCCCAGTTGAATCAAATTGAGAGATTTGTCAGAAATCCTGGTTGATC