| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003B08 | Sequence | 416 | 004983 (25) | ref|XP_007017301.1| | 1e-63 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 644 | 004983 (25) | gb|KJB58446.1| | 3e-113 | hypothetical protein B456_009G210600 [Gossypium raimondii] |
| JMFF003H22 | Sequence | 297 | 004983 (25) | ref|XP_007017301.1| | 1e-33 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 778 | 004983 (25) | ref|XP_009612647.1| | 1e-84 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Nicotiana t |
| JMFF004C05 | Sequence | 546 | 004983 (25) | ref|XP_007017301.1| | 1e-98 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 734 | 004983 (25) | gb|KJB58446.1| | 4e-81 | hypothetical protein B456_009G210600 [Gossypium raimondii] |
| JMFF014C22 | Sequence | 475 | 004983 (25) | gb|KJB58446.1| | 7e-93 | hypothetical protein B456_009G210600 [Gossypium raimondii] | 436 | 004983 (25) | gb|KDO84256.1| | 5e-67 | hypothetical protein CISIN_1g032384mg [Citrus sinensis] |
| JMFF016P14 | Sequence | 543 | 004983 (25) | ref|XP_007017301.1| | 2e-100 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 815 | 004983 (25) | gb|KJB58446.1| | 2e-91 | hypothetical protein B456_009G210600 [Gossypium raimondii] |
| JMFF019H12 | Sequence | 542 | 004983 (25) | ref|XP_007017301.1| | 9e-100 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 815 | 004983 (25) | ref|XP_009612647.1| | 3e-96 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Nicotiana t |
| JMFF027N12 | Sequence | 345 | 004983 (25) | ref|XP_007017301.1| | 7e-46 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 728 | 004983 (25) | gb|KJB58448.1| | 1e-81 | hypothetical protein B456_009G210600 [Gossypium raimondii] |
| JMFF028M12 | Sequence | 426 | 004983 (25) | ref|XP_007017301.1| | 2e-64 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | |||||
| JMFF030E19 | Sequence | 173 | 004983 (25) | ref|XP_007017301.1| | 4e-05 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 732 | 004983 (25) | gb|KJB58446.1| | 4e-81 | hypothetical protein B456_009G210600 [Gossypium raimondii] |
| JMFF044L08 | Sequence | 617 | 004983 (25) | ref|XP_011083825.1| | 6e-134 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Sesamum ind | |||||
| JMFN004F23 | Sequence | 453 | 004983 (25) | ref|XP_007017301.1| | 5e-81 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | |||||
| JMSF008M20 | Sequence | 328 | 004983 (25) | ref|XP_007017301.1| | 4e-41 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 768 | 004983 (25) | ref|XP_009612647.1| | 4e-155 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Nicotiana t |
| JMSF038J11 | Sequence | 645 | 004983 (25) | ref|XP_007017301.1| | 6e-126 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 948 | 004983 (25) | ref|XP_009612647.1| | 7e-168 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Nicotiana t |
| JMSF048D02 | Sequence | 705 | 004983 (25) | ref|XP_007017301.1| | 8e-144 | Mov34/MPN/PAD-1 family protein [Theobroma cacao] gb|EOY14526.1| Mov34/MPN/PAD-1 | 698 | 004983 (25) | gb|KJB58446.1| | 4e-104 | hypothetical protein B456_009G210600 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
rJMFF004C05- ATTTGCATC
rJMFF030E19- ATTTGCATC
rJMSF048D02- ATTTGCATC
rJMFF016P14- ATGATTTGCATC
____________________________________________________________
consensus ATGATTTGCATC
. : . : . : . : . : . :
rJMFF004C05- AAAAGTACAGATTTGTGAACAGACAATAAACATAAGAGCATATGACAACAAATCTCTCTT
rJMFF030E19- AAAAGTACAGATTTGTGAACAGACAATAAACATAAGAGCATATGACAACAAATCTCTCTT
rJMSF048D02- AAAAGTACAGATTTGTGAACAGACAATAAACATAAGAGCATATGACAACAAATCTCTCTT
rJMFF016P14- AAAAGTACAGATTTGTGAACAGACAATAAACATAAGAGCATGTGACAACAAATCTCTCTT
rJMFF003H22- GAGCATATGACAACAAATCTCTCTT
rJMSF038J11- GATTTGTGAACAGACAATAAACATAAGAGCATATGACAACAAATCTCTCTT
____________________________________________________________
consensus AAAAGTACAGATTTGTGAACAGACAATAAACATAAGAGCATATGACAACAAATCTCTCTT
. : . : . : . : . : . :
rJMFF004C05- AAATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMFF030E19- AAATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMSF048D02- AAATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMFF016P14- AAATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMFF019H12- AATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMFF027N12- AAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMFF014C22- AATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMFF003H22- AAATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMSF008M20- GTTTCA
rJMFF003B08- GTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
rJMSF038J11- AAATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
____________________________________________________________
consensus AAATCACTTCAAAGTTACAATAACACCAAGGACAAACTGGTCAACATTGTCTCTGTTTCA
. : . : . : . : . : . :
rJMFF004C05- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMFF030E19- CCATCTCAAATAACAATGTGTAGAG-TTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMSF048D02- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMFF016P14- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMFF019H12- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMFF027N12- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMFF014C22- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAANTCTAGAAGACAACTGTATC
rJMFF003H22- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMSF008M20- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMFF003B08- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
rJMSF038J11- CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
____________________________________________________________
consensus CCATCTCAAATAACAATGTGTAGAGTTTTTTTAGCAAGAATTCTAGAAGACAACTGTATC
. : . : . : . : . : . :
rJMFF004C05- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMFF030E19- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMSF048D02- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACACCAAATTTGACACATGTTCTTC
rJMFF016P14- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMFF019H12- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMFF027N12- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMFF014C22- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMFF003H22- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMSF008M20- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMFF003B08- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
rJMSF038J11- CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
____________________________________________________________
consensus CAGCATAGTTCCCAGTGTCTGAACAATGTTTGATGACATCAAATTTGACACATGTTCTTC
. : . : . : . : . : . :
rJMFF004C05- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMFF030E19- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMSF048D02- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMFF016P14- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMFF019H12- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMFF027N12- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMFF014C22- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMFF003H22- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
JMFF014C22+ TTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMSF008M20- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMFF003B08- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
rJMSF038J11- GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
____________________________________________________________
consensus GAGATGCTTCTTGGCGTCTTGCCTTCCCACATTTGCAATGGCCAGCTTCTCTGGTGGCAA
. : . : . : . : . : . :
rJMFF004C05- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMFF030E19- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMSF048D02- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMFF016P14- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMFF019H12- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMFF027N12- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMFF014C22- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMFF003H22- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
JMFF014C22+ CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMSF008M20- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
rJMFF003B08- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
JMFF044L08+ CTGGACTGCTTTATTATATNTGATAGCAAGATTTAGCATTTCCTGGAC
rJMSF038J11- CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
____________________________________________________________
consensus CTCATCCTCTTCCTGGACTGCTTTATTATATTTGATAGCAAGATTTAGCATTTCCTGGAC
. : . : . : . : . : . :
rJMFF004C05- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMFF030E19- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMSF048D02- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMFF016P14- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMFF019H12- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMFF027N12- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMFF014C22- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMFF003H22- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
JMFF014C22+ TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMSF008M20- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMFF003B08- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
JMFF044L08+ TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
rJMSF038J11- TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
____________________________________________________________
consensus TGTCTCCTCATTGGTTTTGGAGTGGGCATCAAATCGCTGGAGTGTCAATCCATCTGTCCA
. : . : . : . : . : . :
rJMFF004C05- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMFF030E19- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMSF048D02- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMFF016P14- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMFF019H12- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMFF027N12- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMFF014C22- TTTCTTCTTATGGAGATTCACTAACATCTTCTCTTCAAGNTCATTCTTTCTATAATTGAT
rJMFF003H22- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
JMFF014C22+ TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMSF008M20- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMFF003B08- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
JMFF044L08+ TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
rJMSF038J11- TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
____________________________________________________________
consensus TTTCTTCTTATGGAGATTCAGTAACATCTTCTCTTCAAGTTCATTCTTTCTATAATTGAT
. : . : . : . : . : . :
rJMFF004C05- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMFF030E19- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMSF048D02- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMFF016P14- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGGTTTTGT
rJMFF019H12- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMFF027N12- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMFF014C22- TGCTATGGAG
rJMFF003H22- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
JMFF014C22+ TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMSF008M20- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMFF003B08- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
JMFF044L08+ TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
rJMSF038J11- TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
JMSF048D02+ TGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
____________________________________________________________
consensus TGCTATGGAGTAATAGTGCCTGTTCAGACCATGGATCAATGCCTGAATGGATGG-TTTGT
. : . : . : . : . : . :
rJMFF004C05- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT-GGGTTTG
rJMFF030E19- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT-GGGTTTG
rJMSF048D02- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
rJMFF016P14- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCATGGGGTTTG
rJMFF019H12- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT-GGGTTTG
rJMFF027N12- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT-GGGTTTG
rJMFF003H22- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT-GGGTTTG
JMFF014C22+ TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
rJMSF008M20- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
rJMFF003B08- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
JMFF044L08+ TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
rJMSF038J11- TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
JMSF048D02+ TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
JMSF038J11+ CAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
____________________________________________________________
consensus TTAGATGTCCCAAGTTAGATGTTGTCTGCCGTGGCTCTTGGCCAAGCATCAT--GGTTTG
. : . : . : . : . : . :
rJMFF004C05- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMFF030E19- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMSF048D02- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMFF016P14- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMFF019H12- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMFF027N12- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMFF003H22- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
JMFF014C22+ GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMSF008M20- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMFF003B08- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
JMFF044L08+ GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
rJMSF038J11- GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
JMFF016P14+ TGGATCGGATC
JMSF048D02+ GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
JMFF019H12+ CGGATC
JMFF004C05+ GGATCGGATC
JMSF038J11+ GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
____________________________________________________________
consensus GGGGTTGATCAAACGAAAGGCATCAATCACCACCTTTCCTTTAACACTTTGGATCGGATC
. : . : . : . : . : . :
rJMFF004C05- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCCAAACTCTGCTGGAGTATTGATGT
rJMFF030E19- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTGGAGTATTGATGT
rJMSF048D02- CACCACCACTGCAACCGCTCTTTGATTAA
rJMFF016P14- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTGNANTATTGATGT
rJMFF019H12- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTGAAGTATTGATGT
rJMFF027N12- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTGGAGTATTGATGT
rJMFF003H22- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTGAAGTATTGATGT
JMFF014C22+ CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
rJMSF008M20- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
rJMFF003B08- CACCACCACTGCAACCGCTCTTTGATTAANAGCTTCAAAACTCTGCTG-AGTATTGATGT
JMFF044L08+ CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
rJMSF038J11- CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
JMFF016P14+ CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
JMSF048D02+ CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
JMFF019H12+ CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
JMFF004C05+ CACCACCANTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGNTG-AGTATTGATGT
JMSF038J11+ CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
____________________________________________________________
consensus CACCACCACTGCAACCGCTCTTTGATTAAGAGCTTCAAAACTCTGCTG-AGTATTGATGT
. : . : . : . : . : . :
rJMFF004C05- CCAC
rJMFF030E19- CCACAC
rJMFF016P14- CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
rJMFF019H12- CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
rJMFF027N12- CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
rJMFF003H22- CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
JMFF014C22+ CCACACC
rJMSF008M20- CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
rJMFF003B08- C
JMFF044L08+ CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
rJMSF038J11- CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
JMFF016P14+ CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
JMSF048D02+ CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
JMFF019H12+ CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
JMFN004F23+ AAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
JMFF004C05+ CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
JMFF028M12+ CAACCATCT
JMSF038J11+ CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
____________________________________________________________
consensus CCACACCCGAAAGCCAACAGCCGAAACCAGGATGTGAATGATACCAACCAACAACCATCT
. : . : . : . : . : . :
rJMFF016P14- CTGG
rJMFF019H12- CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAANACATGATCAACAG
rJMFF027N12- CTGGCCTGCCAGTTTGCTTGA
rJMFF003H22- CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATA
rJMSF008M20- CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
JMFF044L08+ CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
rJMSF038J11- CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAATAG
JMFF016P14+ CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
JMSF048D02+ CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
JMFF019H12+ CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
JMFN004F23+ CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
JMFF003B08+ TGGCCTGCCAGTTTGCTTGAGCANGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
JMFF004C05+ CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
JMFF028M12+ CTGGCATGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTNTGGAAGACATGATCAACAG
JMSF038J11+ CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAATAG
____________________________________________________________
consensus CTGGCCTGCCAGTTTGCTTGAGCATGTCAAGCATATTGGTCTGGAAGACATGATCAACAG
. : . : . : . : . : . :
rJMFF019H12- CTTCAACACTCACTCCGGTCCCGCTCTGTGG
rJMSF008M20- CTTCAACACTCACTCCGGTCCCGCTCTG
JMFF044L08+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
rJMSF038J11- CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMFF016P14+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMSF048D02+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMFF019H12+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMFN004F23+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMFF003B08+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMFF027N12+ CTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMFF004C05+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMFF028M12+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACNG
JMSF038J11+ CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
JMSF008M20+ GCATAGCGAACACATCGACCACGCGGACCG
____________________________________________________________
consensus CTTCAACACTCACTCCGGTCCCGCTCTGTGGCATAGCGAACACATCGACCACGCGGACCG
. : . : . : . : . : . :
JMFF044L08+ TGTACTCATCCACAAA-TTCCCCCAACATTAATC
rJMSF038J11- TGTACTCATCCACAAANTTCCCCCNACATCAATCCCATGGACTTCCATCGGAACCCCGGC
JMFF016P14+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMSF048D02+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMFF019H12+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMFN004F23+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMFF003B08+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMFF027N12+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMFF004C05+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMFF003H22+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMFF028M12+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMSF038J11+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
JMSF008M20+ TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
____________________________________________________________
consensus TGTACTCATCCACAAA-TTCCCCCAACATCAATCCCAT-GACTTCCATCGGAACCCCGGC
. : . : . : . : . : . :
rJMSF038J11- T
JMFF016P14+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMSF048D02+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMFF019H12+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMFN004F23+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMFF003B08+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMFF027N12+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMFF004C05+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMFF003H22+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMFF028M12+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMSF038J11+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
JMSF008M20+ TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
____________________________________________________________
consensus TCTCCCGTGTTTGAGCATCTTGAGGAGAGCGAGAGAAGAGATGTAGACTTGCTCCGATGA
. : . : . : . : . : . :
JMFF016P14+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMSF048D02+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFF019H12+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFN004F23+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFF003B08+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFF027N12+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFF004C05+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFF003H22+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFF030E19+ AGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMFF028M12+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMSF038J11+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
JMSF008M20+ ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
____________________________________________________________
consensus ATCGAGAGTAGGAGAATCCGGCGGCGGGTGACCTAACGCACCACCGGCTCCGGCGAACAT
. : . : . : . : . : . :
JMFF016P14+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMSF048D02+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFF019H12+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFN004F23+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFF003B08+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFF027N12+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFF004C05+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFF003H22+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFF030E19+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMFF028M12+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMSF038J11+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
JMSF008M20+ ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
____________________________________________________________
consensus ACGCTGCAGCCTTTCCATTCCCGACATGATTGGTTTAAGATTTACTCTCTCTTCCGCTAT
. : . : . : . : . : . :
JMFF016P14+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTC
JMSF048D02+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTC
JMFF019H12+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMFN004F23+ GCTTTAGCCGCTTCGATTTCTT
JMFF003B08+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMFF027N12+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMFF004C05+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMFF003H22+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMFF030E19+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMFF028M12+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMSF038J11+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCC
JMSF008M20+ GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCCC
____________________________________________________________
consensus GCTTTAGCCGCTTCGATTTCTTTGGAAACACGACTACTGTGGAATTAAAATCCTCACCCC