Contig 004982:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008L18-                       ACTTGTGTTGATGCTTTGCTCTTTTCTCTCAATTATATATTTATAAA
rJMFF018C22-                                                      ATTATATATTTATAAA
                      ____________________________________________________________
consensus                          ACTTGTGTTGATGCTTTGCTCTTTTCTCTCAATTATATATTTATAAA
 
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rJMSF008L18-          CGTCAAAGTACAAACATATTTGGAGAATCTTAGTCAAAATATTCCAATTAACCTCAGTTT
rJMFF018C22-          CGTCAAAGTACAAACATATTTGGAGAATCTTAGTCAAAATATTCCAATTAACCTCAGTTT
                      ____________________________________________________________
consensus             CGTCAAAGTACAAACATATTTGGAGAATCTTAGTCAAAATATTCCAATTAACCTCAGTTT
 
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rJMSF008L18-          AAGATCGGAGTTGATTAACCTATATATGGCAATGTTGTTTTCAATATGCAACCAAGTTTG
rJMFF018C22-          AAGATCGGAGTTGATTAACCTATATATGGCAATGTTGTTTTCAATATGCAACCAAGTTTG
                      ____________________________________________________________
consensus             AAGATCGGAGTTGATTAACCTATATATGGCAATGTTGTTTTCAATATGCAACCAAGTTTG
 
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rJMSF008L18-          CAGGTTGCCAGCTATTGACCACTCTGCAGTTTCTTCTAATCTCTCCCGGCCTCCCAGATT
rJMFF018C22-          CAGGTTGCCAGCTATTGACCACTCTGCAGTTTCTTCTAATCTCTCCCGGCCTCCCAGATT
                      ____________________________________________________________
consensus             CAGGTTGCCAGCTATTGACCACTCTGCAGTTTCTTCTAATCTCTCCCGGCCTCCCAGATT
 
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rJMSF008L18-          GAAGATCACCCATTTTTATCATCCCTTCAACAAAAGCCTCAAAGAATGCACTCTCATTTC
rJMFF018C22-          GAAGATCACCCATTTTTATCATCCCTTCAACAAAAGCCTCAAAGAATGCACTCTCATTTC
                      ____________________________________________________________
consensus             GAAGATCACCCATTTTTATCATCCCTTCAACAAAAGCCTCAAAGAATGCACTCTCATTTC
 
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rJMSF008L18-          TTCTATACTGCATCACATACCCTCTAGTCTCACGGGTGGTGAAAAGTGATTCATCTGAAT
rJMFF018C22-          TTCTATACTGCATCACATACCCTCTAGTCTCACGGGTGGTGAAAAGTGATTCATCTGAAT
                      ____________________________________________________________
consensus             TTCTATACTGCATCACATACCCTCTAGTCTCACGGGTGGTGAAAAGTGATTCATCTGAAT
 
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rJMSF008L18-          TCAGAAATCCTCTCCCATTCACCAAGTCCTTGAAATACTGGTTGTCGAATACTTGAGGTG
rJMFF018C22-          TCAGAAATCCTCTCCCATTCACCAAGTCCTTGAAATACTGGTTGTCGAATACTTGAGGTG
                      ____________________________________________________________
consensus             TCAGAAATCCTCTCCCATTCACCAAGTCCTTGAAATACTGGTTGTCGAATACTTGAGGTG
 
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rJMSF008L18-          TGGCGTCTAAGTCCCCCGTTACATTTCCATCCCCGCCCAGTGGGCAAAGCTTGTCCAGCT
rJMFF018C22-          TGGCGTCTAAGTCCCCCGTTACATTTCCATCCCCGCCCAGTGGGCAAAGCTTGTCCAGCT
JMFF018C22+                                                 AGTGGGCAAAGCTTGTCCAGCT
                      ____________________________________________________________
consensus             TGGCGTCTAAGTCCCCCGTTACATTTCCATCCCCGCCCAGTGGGCAAAGCTTGTCCAGCT
 
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rJMSF008L18-          TTTCCCTGAAGTTTGGCTCAATGGCCGGGTCAGGCCGTCCTGTCCCCGATTGGTTGTACA
rJMFF018C22-          TTTCCCTGAAGTTTGGCTCAATGGCCGGGTCAGGCCGTCCTGTCCCCGATTGGTTGTACA
JMFF018C22+           TTTCCCTGAAGTTTGGCTCAATGGCCGGGTCAGGCCGTCCTGTCCCCGATTGGTTGTACA
                      ____________________________________________________________
consensus             TTTCCCTGAAGTTTGGCTCAATGGCCGGGTCAGGCCGTCCTGTCCCCGATTGGTTGTACA
 
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rJMSF008L18-          ACCGAAACACAATGGAAAAACACCTTCCCTGACCAATGGAATGAGACCCTGAAAGTGCTA
rJMFF018C22-          ACCGAAACACAATGGAAAAACACCTTCCCTGACCAATGGAATGAGACCCTGAAAGTGCTA
JMFF018C22+           ACCGAAACACAATGGAAAAACACCTTCCCTGACCAATGGAATGAGACCCTGAAAGTGCTA
                      ____________________________________________________________
consensus             ACCGAAACACAATGGAAAAACACCTTCCCTGACCAATGGAATGAGACCCTGAAAGTGCTA
 
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rJMSF008L18-          CTAGATCTTTCACTGACAGATTTAATCCGCTAAACAGATCAATGAGGGTGGTTGCATCTG
rJMFF018C22-          CTAGATCTTTCACTGACAGATTTAATCCGCTAAACAGATCAATGAGGGTGGTTGCATCTG
JMFF018C22+           CTAGATCTTTCACTGACAGATTTAATCCGCTAAACAGATCAATGAGGGTGGTTGCATCTG
                      ____________________________________________________________
consensus             CTAGATCTTTCACTGACAGATTTAATCCGCTAAACAGATCAATGAGGGTGGTTGCATCTG
 
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rJMSF008L18-          CTCTAGGGCTTGGCATGATATTGTCTGCATCTTCTTGGCTTGCTGTTAAGCTGTCTATCC
rJMFF018C22-          CTCTAGGGCTTGGCATGATATTGTCTGCATCTTCTTGGCTTGCTGTTAAGCTGTCTATCC
JMFF018C22+           CTCTAGGGCTTGGCATGATATTGTCTGCATCTTCTTGGCTTGCTGTTAAGCTGTCTATCC
                      ____________________________________________________________
consensus             CTCTAGGGCTTGGCATGATATTGTCTGCATCTTCTTGGCTTGCTGTTAAGCTGTCTATCC
 
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rJMSF008L18-          TTCCCAGCTTTACTTCCCAGTTAGGTCCTCCACTCAGAACAACAGCATCTCTGGCAGCCA
rJMFF018C22-          TTCCCAGCTTTACTTCCCAGTTANGTCCTCCACTCAGAACAACAGCATCTCTGGCAGCCA
JMFF018C22+           TTCCCAGCTTTACTTCCCAGTTAGGTCCTCCACTCAGAACAACAGCATCTCTGGCAGCCA
JMSF008L18+                               TTAGGTCCTCCACTCAGAACAACAGCATCTCTGGCAGCCA
                      ____________________________________________________________
consensus             TTCCCAGCTTTACTTCCCAGTTAGGTCCTCCACTCAGAACAACAGCATCTCTGGCAGCCA
 
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rJMSF008L18-          TGATTATG                                                    
rJMFF018C22-          TGATTATGATATCAGCACAGGAAACAACCCCA                            
JMFF018C22+           TGATTATGATATCAGCACAGGAAACAACCCCAGGACAGGCCATCTCCACAGCTTCCTTAA
JMSF008L18+           TGATTATGATATCAGCACAGGAAACAACCCCAGGACAGGCCATCTCCACAGCTTCCTTAA
                      ____________________________________________________________
consensus             TGATTATGATATCAGCACAGGAAACAACCCCAGGACAGGCCATCTCCACAGCTTCCTTAA
 
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JMFF018C22+           CTTCATCAACAACTTCATATGACCTCAGCGAATTTATATTCGACAAACAAAGCTTCTCTC
JMSF008L18+           CTTCATCAACAACTTCATATGACCTCAGCGAATTTATATTCGACAAACAAAGCTTCTCTC
                      ____________________________________________________________
consensus             CTTCATCAACAACTTCATATGACCTCAGCGAATTTATATTCGACAAACAAAGCTTCTCTC
 
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JMFF018C22+           CCAACATGTCCGGCGTATCATCCAACAACAACGACGCATCGCATCCGTTAACAAAGCAAT
JMSF008L18+           CCAACATGTCCGGCGTATCATCCAACAACAACGACGCATCGCATCCGTTAACAAAGCAAT
                      ____________________________________________________________
consensus             CCAACATGTCCGGCGTATCATCCAACAACAACGACGCATCGCATCCGTTAACAAAGCAAT
 
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JMFF018C22+           CGTGAAACTGCAAGCGCATCACTGAGGCGGCGCTTCTGGGCTCTTTTTCCATGTT     
JMSF008L18+           CGTGAAACTGCAAGCGCATCACTGAGGCGGCGCTTCTGGGCTCTTTTTCCATGTTCCTCT
                      ____________________________________________________________
consensus             CGTGAAACTGCAAGCGCATCACTGAGGCGGCGCTTCTGGGCTCTTTTTCCATGTTCCTCT
 
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JMSF008L18+           TGATCACGCCCCTGACAATCTCCTCCGCCTCTGGACACGTCTCGGAGTAAAATCCGGGCC
                      ____________________________________________________________
consensus             TGATCACGCCCCTGACAATCTCCTCCGCCTCTGGACACGTCTCGGAGTAAAATCCGGGCC
 
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JMSF008L18+           GGAGCTCCACGATCTCCGCTTGGATCGCGGAGAGGTTGAGGAGGAAGAAGATGACCAGTG
                      ____________________________________________________________
consensus             GGAGCTCCACGATCTCCGCTTGGATCGCGGAGAGGTTGAGGAGGAAGAAGATGACCAGTG
 
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JMSF008L18+           TTGTATACATCTTTAGCAGCACTGATTTTGGCGGGTATGGAAAAATGGCGAGTAAGAATC
                      ____________________________________________________________
consensus             TTGTATACATCTTTAGCAGCACTGATTTTGGCGGGTATGGAAAAATGGCGAGTAAGAATC