Contig 004978:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008E06Sequence493004978 (2)ref|XP_009623514.1|9e-16PREDICTED: probable galacturonosyltransferase 3 isoform X1 [Nicotiana tomentosi780001287 (2)ref|XP_009623514.1|1e-164PREDICTED: probable galacturonosyltransferase 3 isoform X1 [Nicotiana tomentosi
JMSF011C05Sequence336004978 (2)ref|XP_009623514.1|1e-19PREDICTED: probable galacturonosyltransferase 3 isoform X1 [Nicotiana tomentosi764001287 (2)ref|XP_009623514.1|4e-160PREDICTED: probable galacturonosyltransferase 3 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF008E06+ CATCATCATTCTC
                      ____________________________________________________________
consensus CATCATCATTCTC
 
. : . : . : . : . : . :
JMSF008E06+ ATCACTAGGGTTTTTCCAGACCCATGACTTTGAAAGGTTATCAGACTTCACCCTCATGGC
                      ____________________________________________________________
consensus ATCACTAGGGTTTTTCCAGACCCATGACTTTGAAAGGTTATCAGACTTCACCCTCATGGC
 
. : . : . : . : . : . :
JMSF008E06+ TCTAACAGCACCTGAAGCATCACTGTATGTTACAATTATGTCAATATCCTTTTCATTTGG
                      ____________________________________________________________
consensus TCTAACAGCACCTGAAGCATCACTGTATGTTACAATTATGTCAATATCCTTTTCATTTGG
 
. : . : . : . : . : . :
JMSF008E06+ ACGCGCAGCAGAACCTGTATGACTTTGCTCCTGCCAAGTCATTGCCGAAGATTTAATGGG
                      ____________________________________________________________
consensus ACGCGCAGCAGAACCTGTATGACTTTGCTCCTGCCAAGTCATTGCCGAAGATTTAATGGG
 
. : . : . : . : . : . :
JMSF011C05+ CCTTTCTATTGG
JMSF008E06+ AGGAATGAACAGGCACAATGAGATGCTCACATGCAGACAGTGAAAATACCTTTCTATTGG
                      ____________________________________________________________
consensus AGGAATGAACAGGCACAATGAGATGCTCACATGCAGACAGTGAAAATACCTTTCTATTGG
 
. : . : . : . : . : . :
JMSF011C05+ CACGTTCTGGACAATCATACAGGGGCAAAAGATCTCTGAGCTCCGTCCGAACTGTTGATC
JMSF008E06+ CACGTTCTGGACAATCATACAGGGGCAAAAGATCTCTGAGCTCCGTCCGAACTGTTGATC
                      ____________________________________________________________
consensus CACGTTCTGGACAATCATACAGGGGCAAAAGATCTCTGAGCTCCGTCCGAACTGTTGATC
 
. : . : . : . : . : . :
JMSF011C05+ CATATGATATTTCTGCTCCAACAACTGCTGTGTATAACATAACCAGGAAGAGGAAGACGG
JMSF008E06+ CATATGATATTTCTGCTCCAACAACTGCTGTGTATAACATAACCAGGAAGAGGAAGACGG
                      ____________________________________________________________
consensus CATATGATATTTCTGCTCCAACAACTGCTGTGTATAACATAACCAGGAAGAGGAAGACGG
 
. : . : . : . : . : . :
JMSF011C05+ TGAGCAGAGATGCAGAAGGGCATGATCCTGTAAAGAGAAGCCGAGGAGCACTCATCCT
JMSF008E06+ TGAGCAGAGATGCAGAAGGGCATGATCCTGTAAAGAGAAGCCGAGGAGCACTCATCCTGA
                      ____________________________________________________________
consensus TGAGCAGAGATGCAGAAGGGCATGATCCTGTAAAGAGAAGCCGAGGAGCACTCATCCTGA
 
. : . : . : . : . : . :
JMSF008E06+ ATCCTGAGTTCCTGACGGTGAGCAGATAATACACAAAGCCAAACAACGATTTAGATCTCC
                      ____________________________________________________________
consensus ATCCTGAGTTCCTGACGGTGAGCAGATAATACACAAAGCCAAACAACGATTTAGATCTCC