Contig 004972:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002F05Sequence395004972 (5)ref|XP_002267566.1|9e-19PREDICTED: guanine nucleotide-binding protein-like NSN1 [Vitis vinifera] emb|CB722012522 (4)ref|XP_009612778.1|2e-67PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento
JMSF006L11Sequence380004972 (5)ref|XP_006407876.1|4e-10hypothetical protein EUTSA_v10020356mg [Eutrema salsugineum] gb|ESQ49329.1| hypo
JMSF007L11Sequence377004972 (5)ref|XP_006407876.1|4e-10hypothetical protein EUTSA_v10020356mg [Eutrema salsugineum] gb|ESQ49329.1| hypo626012522 (4)ref|XP_009612778.1|1e-33PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento
JMSF025F21Sequence658004972 (5)ref|XP_002267566.1|1e-69PREDICTED: guanine nucleotide-binding protein-like NSN1 [Vitis vinifera] emb|CB733012522 (4)ref|XP_009612778.1|5e-67PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento
JMSF026O19Sequence643004972 (5)ref|XP_002267566.1|4e-61PREDICTED: guanine nucleotide-binding protein-like NSN1 [Vitis vinifera] emb|CB750012522 (4)ref|XP_009612778.1|7e-61PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025F21+ TCGAAGATACTTGAGCCACTTTTCAACGGCTTCCCTTGGGACTAGAT
JMSF026O19+ CCCTTGGGACTAGAT
                      ____________________________________________________________
consensus TCGAAGATACTTGAGCCACTTTTCAACGGCTTCCCTTGGGACTAGAT
 
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JMSF025F21+ CAATTTTATTAAGGAGCAAGACAAGATGTTTGTCATGTCCTGATCTCATAACCATCTTTT
JMSF026O19+ CAATTTTATTAAGGAGCAAGACAAGATGTTTGTCATGTCCTGATCTCATAACCATCTTTT
                      ____________________________________________________________
consensus CAATTTTATTAAGGAGCAAGACAAGATGTTTGTCATGTCCTGATCTCATAACCATCTTTT
 
. : . : . : . : . : . :
JMSF025F21+ CCATGTCAATGCAACGAGTACCAAGTGGATCTCTGGCATCAAGGACTTCCAAAATGACAT
JMSF026O19+ CCATGTCAATGCAACGAGTACCAAGTGGATCTCTGGCATCAAGGACTTCCAAAATGACAT
                      ____________________________________________________________
consensus CCATGTCAATGCAACGAGTACCAAGTGGATCTCTGGCATCAAGGACTTCCAAAATGACAT
 
. : . : . : . : . : . :
JMSF025F21+ CAGAAGCTTCAATAACTTTGACTAATTCCTTGCAGAAAGCCCGATCTGAGTTATCATGCT
JMSF026O19+ CAGAAGCTTCAATAACTTTGACTAATTCCTTGCAGAAAGCCCGATCTGAGTTATCATGCT
                      ____________________________________________________________
consensus CAGAAGCTTCAATAACTTTGACTAATTCCTTGCAGAAAGCCCGATCTGAGTTATCATGCT
 
. : . : . : . : . : . :
JMSF025F21+ TTTTACCAACAGCTGCAAAACCATCATCAATAATTTCCCCAACAAACTTTTGCTCTTTCA
JMSF026O19+ TTTTACCAACAGCTGCAAAACCATCATCAATAATTTCCCCAACAAACTTTTGCTCTTTCA
JMSF002F05+ TTTCA
                      ____________________________________________________________
consensus TTTTACCAACAGCTGCAAAACCATCATCAATAATTTCCCCAACAAACTTTTGCTCTTTCA
 
. : . : . : . : . : . :
JMSF006L11+ GGAGCCCCAACTTTCTCT
JMSF025F21+ CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
JMSF026O19+ CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
JMSF002F05+ CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
JMSF007L11+ GAGCCCCAACTTTCTCT
                      ____________________________________________________________
consensus CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
 
. : . : . : . : . : . :
JMSF006L11+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF025F21+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF026O19+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF002F05+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF007L11+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
                      ____________________________________________________________
consensus TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
 
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JMSF006L11+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF025F21+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF026O19+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF002F05+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF007L11+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
                      ____________________________________________________________
consensus GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
 
. : . : . : . : . : . :
JMSF006L11+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF025F21+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF026O19+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF002F05+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF007L11+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
                      ____________________________________________________________
consensus GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
 
. : . : . : . : . : . :
JMSF006L11+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF025F21+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF026O19+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF002F05+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF007L11+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
                      ____________________________________________________________
consensus TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
 
. : . : . : . : . : . :
JMSF006L11+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAG
JMSF025F21+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
JMSF026O19+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
JMSF002F05+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
JMSF007L11+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
                      ____________________________________________________________
consensus TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
 
. : . : . : . : . : . :
JMSF025F21+ GAAGTGCTGA
JMSF026O19+ GAAGTGCTGAATGCCGTCTGCCGAATT
JMSF002F05+ GAAGTGCTGAATGCCGTCTGCCGAATT
JMSF007L11+ GAAGTGCTGAATGCCGTCTGCCGAATTAGGGTTGCAAAAGTATGCTCAATAGTCAATATC
                      ____________________________________________________________
consensus GAAGTGCTGAATGCCGTCTGCCGAATTAGGGTTGCAAAAGTATGCTCAATAGTCAATATC