| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002F05 | Sequence | 395 | 004972 (5) | ref|XP_002267566.1| | 9e-19 | PREDICTED: guanine nucleotide-binding protein-like NSN1 [Vitis vinifera] emb|CB | 722 | 012522 (4) | ref|XP_009612778.1| | 2e-67 | PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento |
| JMSF006L11 | Sequence | 380 | 004972 (5) | ref|XP_006407876.1| | 4e-10 | hypothetical protein EUTSA_v10020356mg [Eutrema salsugineum] gb|ESQ49329.1| hypo | |||||
| JMSF007L11 | Sequence | 377 | 004972 (5) | ref|XP_006407876.1| | 4e-10 | hypothetical protein EUTSA_v10020356mg [Eutrema salsugineum] gb|ESQ49329.1| hypo | 626 | 012522 (4) | ref|XP_009612778.1| | 1e-33 | PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento |
| JMSF025F21 | Sequence | 658 | 004972 (5) | ref|XP_002267566.1| | 1e-69 | PREDICTED: guanine nucleotide-binding protein-like NSN1 [Vitis vinifera] emb|CB | 733 | 012522 (4) | ref|XP_009612778.1| | 5e-67 | PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento |
| JMSF026O19 | Sequence | 643 | 004972 (5) | ref|XP_002267566.1| | 4e-61 | PREDICTED: guanine nucleotide-binding protein-like NSN1 [Vitis vinifera] emb|CB | 750 | 012522 (4) | ref|XP_009612778.1| | 7e-61 | PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Nicotiana tomento |
This contig is upended
. : . : . : . : . : . :
JMSF025F21+ TCGAAGATACTTGAGCCACTTTTCAACGGCTTCCCTTGGGACTAGAT
JMSF026O19+ CCCTTGGGACTAGAT
____________________________________________________________
consensus TCGAAGATACTTGAGCCACTTTTCAACGGCTTCCCTTGGGACTAGAT
. : . : . : . : . : . :
JMSF025F21+ CAATTTTATTAAGGAGCAAGACAAGATGTTTGTCATGTCCTGATCTCATAACCATCTTTT
JMSF026O19+ CAATTTTATTAAGGAGCAAGACAAGATGTTTGTCATGTCCTGATCTCATAACCATCTTTT
____________________________________________________________
consensus CAATTTTATTAAGGAGCAAGACAAGATGTTTGTCATGTCCTGATCTCATAACCATCTTTT
. : . : . : . : . : . :
JMSF025F21+ CCATGTCAATGCAACGAGTACCAAGTGGATCTCTGGCATCAAGGACTTCCAAAATGACAT
JMSF026O19+ CCATGTCAATGCAACGAGTACCAAGTGGATCTCTGGCATCAAGGACTTCCAAAATGACAT
____________________________________________________________
consensus CCATGTCAATGCAACGAGTACCAAGTGGATCTCTGGCATCAAGGACTTCCAAAATGACAT
. : . : . : . : . : . :
JMSF025F21+ CAGAAGCTTCAATAACTTTGACTAATTCCTTGCAGAAAGCCCGATCTGAGTTATCATGCT
JMSF026O19+ CAGAAGCTTCAATAACTTTGACTAATTCCTTGCAGAAAGCCCGATCTGAGTTATCATGCT
____________________________________________________________
consensus CAGAAGCTTCAATAACTTTGACTAATTCCTTGCAGAAAGCCCGATCTGAGTTATCATGCT
. : . : . : . : . : . :
JMSF025F21+ TTTTACCAACAGCTGCAAAACCATCATCAATAATTTCCCCAACAAACTTTTGCTCTTTCA
JMSF026O19+ TTTTACCAACAGCTGCAAAACCATCATCAATAATTTCCCCAACAAACTTTTGCTCTTTCA
JMSF002F05+ TTTCA
____________________________________________________________
consensus TTTTACCAACAGCTGCAAAACCATCATCAATAATTTCCCCAACAAACTTTTGCTCTTTCA
. : . : . : . : . : . :
JMSF006L11+ GGAGCCCCAACTTTCTCT
JMSF025F21+ CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
JMSF026O19+ CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
JMSF002F05+ CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
JMSF007L11+ GAGCCCCAACTTTCTCT
____________________________________________________________
consensus CAGAAGCCATGTCTGCTAGTTTTGACAAATCATCATCTTCAAGGAGCCCCAACTTTCTCT
. : . : . : . : . : . :
JMSF006L11+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF025F21+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF026O19+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF002F05+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
JMSF007L11+ TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
____________________________________________________________
consensus TCTTAGCCCTCTCTTTGCGGGCAGCTTTCTTCTGCTCAATTTCCTCAAGGGCTCGATTAC
. : . : . : . : . : . :
JMSF006L11+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF025F21+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF026O19+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF002F05+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
JMSF007L11+ GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
____________________________________________________________
consensus GACGATCTTCGAGAGCCTTGAGCTCCTGTTCCTTGAAAGGCCATTCATTGGGGATACCAG
. : . : . : . : . : . :
JMSF006L11+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF025F21+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF026O19+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF002F05+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
JMSF007L11+ GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
____________________________________________________________
consensus GGTCCTTCTCGACCTTCTTGCGGCCACCTGACTTCGCCGCCTTCTTGGCCTCCTTGGCTT
. : . : . : . : . : . :
JMSF006L11+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF025F21+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF026O19+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF002F05+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
JMSF007L11+ TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
____________________________________________________________
consensus TCTTCTTGTGGTGCTCCTTCACCTTCCTTATGACCTTGTACTTGTTCTTCAGAGATACTC
. : . : . : . : . : . :
JMSF006L11+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAG
JMSF025F21+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
JMSF026O19+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
JMSF002F05+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
JMSF007L11+ TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
____________________________________________________________
consensus TCTTGCTCTTGCTCTTCTTGCTCTTCTTAACCATCTTCGTTTGTCGAAGGAGAGAGCTGG
. : . : . : . : . : . :
JMSF025F21+ GAAGTGCTGA
JMSF026O19+ GAAGTGCTGAATGCCGTCTGCCGAATT
JMSF002F05+ GAAGTGCTGAATGCCGTCTGCCGAATT
JMSF007L11+ GAAGTGCTGAATGCCGTCTGCCGAATTAGGGTTGCAAAAGTATGCTCAATAGTCAATATC
____________________________________________________________
consensus GAAGTGCTGAATGCCGTCTGCCGAATTAGGGTTGCAAAAGTATGCTCAATAGTCAATATC