Contig 004970:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS039C09Sequence640004970 (3)ref|XP_009788682.1|7e-75PREDICTED: ABC transporter G family member 32-like [Nicotiana sylvestris]
JMSF007J17Sequence327004970 (3)ref|XP_009601411.1|7e-15PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]739004403 (2)ref|XP_009601411.1|3e-82PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]
JMSF049M07Sequence703004970 (3)ref|XP_009788682.1|7e-79PREDICTED: ABC transporter G family member 32-like [Nicotiana sylvestris]714004403 (2)ref|XP_009601411.1|1e-63PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS039C09+                                                               CCAATCGC
JMSF049M07+                                                              GCCAATCGC
                      ____________________________________________________________
consensus                                                                GCCAATCGC
 
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JMFS039C09+           GCTGGCTGACATATGCAGACGTTCTCTGAGGCACAAACTCATTCAGATTGTGCCCATGNT
JMSF049M07+           GCTGGCTGACATATGCAGACGTTCTCTGAGGCACAAACTCATTCAGATTGTGCCCATTGT
                      ____________________________________________________________
consensus             GCTGGCTGACATATGCAGACGTTCTCTGAGGCACAAACTCATTCAGATTGTGCCCATTGT
 
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JMFS039C09+           ATGTAATCTTCCCTGACATCTTCAAACCAGGCCCAAGGCGCCCGGCAAGAGCCAAAAGCA
JMSF049M07+           ATGTAATCTTCCCTGACATCTTCAAACCAGGCCCAAGGCGCCCGGCAAGAGCCAAAAGCA
                      ____________________________________________________________
consensus             ATGTAATCTTCCCTGACATCTTCAAACCAGGCCCAAGGCGCCCGGCAAGAGCCAAAAGCA
 
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JMFS039C09+           AAGTAGTCTTCCCAGAGCTCGGAGGGCCGAGAAGAAGAGTCAGCCTTGAAGGCCTTAGGA
JMSF049M07+           AAGTAGTCTTCCCAGAGCTCGGAGGGCCGAGAAGAAGAGTCAGCCTTGAAGGCCTTAGGA
                      ____________________________________________________________
consensus             AAGTAGTCTTCCCAGAGCTCGGAGGGCCGAGAAGAAGAGTCAGCCTTGAAGGCCTTAGGA
 
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JMFS039C09+           TGCCACTGATGTTATTTAGGACAGACAGCCTCTTCCTCCGGCTGGGAAAAATCCTCAACT
JMSF049M07+           TGCCACTGATGTTATTTAGGACAGACAGCCTCTTCCTCCGGCTGGGAAAAATCCTCAACT
                      ____________________________________________________________
consensus             TGCCACTGATGTTATTTAGGACAGACAGCCTCTTCCTCCGGCTGGGAAAAATCCTCAACT
 
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JMFS039C09+           TTCTCAAGAATGCCTCTGTCATGTTGAATAAGAAATTGGGGATTGTTGGTAAGGCTCTAC
JMSF049M07+           TTCTCAAGAATGCCTCTGTCATGTTGAATAAGAAATTGGGGATTGTTGGTAAGGCTCTAC
                      ____________________________________________________________
consensus             TTCTCAAGAATGCCTCTGTCATGTTGAATAAGAAATTGGGGATTGTTGGTAAGGCTCTAC
 
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JMFS039C09+           TCCCTTCATGGACAAATGCATCCACCTTAAGATCTTGAAACCGAACTTCAACCTTTGGAA
JMSF049M07+           TCCCTTCATGGACAAATGCATCCACCTTAAGATCTTGAAACCGAACTTCAACCTTTGGAA
                      ____________________________________________________________
consensus             TCCCTTCATGGACAAATGCATCCACCTTAAGATCTTGAAACCGAACTTCAACCTTTGGAA
 
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JMFS039C09+           ACTCCAAATCAACCGCCTCGAATCTCTGCCTAACTCGTCGGAAGAACAGCTCGGTATCCT
JMSF049M07+           ACTCCAAATCAACCGCCTCGAATCTCTGCCTAACTCGTCGGAAGAACAGCTCGGTATCCT
JMSF007J17+                                            CTCGTCGGAAGAACAGCTCGGTATCCT
                      ____________________________________________________________
consensus             ACTCCAAATCAACCGCCTCGAATCTCTGCCTAACTCGTCGGAAGAACAGCTCGGTATCCT
 
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JMFS039C09+           CATCAATAGCAGCAATCATCTTCTCCAACACCTCCTCCTGTTCTTGTTCTTTGAGCTTCC
JMSF049M07+           CATCAATAGCAGCAATCATCTTCTCCAACACCTCCTCCTGTTCTTGTTCTTTGAGCTTCC
JMSF007J17+           CATCAATAGCAGCAATCATCTTCTCCAACACCTCCTCCTGTTCTTGTTCTTTGAGCTTCC
                      ____________________________________________________________
consensus             CATCAATAGCAGCAATCATCTTCTCCAACACCTCCTCCTGTTCTTGTTCTTTGAGCTTCC
 
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JMFS039C09+           CAACATCCAGCACAGAAACCTCTCCATCCTGGCCAATAAAGACCGAATTCCGGGCACGAA
JMSF049M07+           CAACATCCAGCACAGAAACCTCTCCATCCTGGCCAATAAAGACCGAATTCCGGGCACGAA
JMSF007J17+           CAACATCCAGCACAGAAACCTCTCCATCCTGGCCAATAAAGACCGAATTCCGGGCACGAA
                      ____________________________________________________________
consensus             CAACATCCAGCACAGAAACCTCTCCATCCTGGCCAATAAAGACCGAATTCCGGGCACGAA
 
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JMFS039C09+           AGACGGTGGGAGACCTCTGCAGGGCAGCCTTGATGAGTGCTTCCTCATCACTGCACCCAC
JMSF049M07+           AGACGGTGGGAGACCTCTGCAGGGCAGCCTTGATGAGTGCTTCCTCATCACTGCACCCAC
JMSF007J17+           AGACGGTGGGAGACCTCTGCAGGGCAGCCTTGATGAGTGCTTCCTCATCACTGCACCCAC
                      ____________________________________________________________
consensus             AGACGGTGGGAGACCTCTGCAGGGCAGCCTTGATGAGTGCTTCCTCATCACTGCACCCAC
 
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JMFS039C09+           CACTCTGGGCTAATCTT                                           
JMSF049M07+           CACTCTGGGCTAATCTTGAAAACATGATTTCTTTGGGACTCCACATTGTGGTGTGCAGTG
JMSF007J17+           CACTCTGGGCTAATCTTGAAAACATGATTTCTTTGGGACTCCACATTGTGGTGTGCAGTG
                      ____________________________________________________________
consensus             CACTCTGGGCTAATCTTGAAAACATGATTTCTTTGGGACTCCACATTGTGGTGTGCAGTG
 
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JMSF049M07+           GAGAGAGTGGAAACCAGGCCTTTCATATAGCTC                           
JMSF007J17+           GAGAGAGTGGAAACCAGGCCTTTCATATAGCTCAGTTGGTCTAGTTTTTGGTTAATGTTC
                      ____________________________________________________________
consensus             GAGAGAGTGGAAACCAGGCCTTTCATATAGCTCAGTTGGTCTAGTTTTTGGTTAATGTTC