Contig 004969:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007F03Sequence381004969 (3)ref|XP_004250934.1|84.3PREDICTED: uncharacterized protein LOC101247982 [Solanum lycopersicum]663004969 (3)ref|XP_009603080.1|4e-36PREDICTED: uncharacterized protein LOC104098122 isoform X1 [Nicotiana tomentosi
JMSF032P03Sequence656004969 (3)ref|XP_009603080.1|3e-39PREDICTED: uncharacterized protein LOC104098122 isoform X1 [Nicotiana tomentosi691022585ref|XP_004235177.1|6e-58PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Solanum lyc

Alignment

This contig is upended


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JMSF032P03+                                                   TTTTTTTTTTGAGTGTTATG
rJMSF007F03-                                                             AGTGTTATG
                      ____________________________________________________________
consensus                                                     TTTTTTTTTTGAGTGTTATG
 
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JMSF032P03+           ATGTTTCTATAAGACAAGACAATAGTACATTTTCAAATGGTGAAGCTTCCATATTGATAT
rJMSF007F03-          ATGTTTCTATAAGACAAGACAATAGTACATTTTCAAATGGTGAAGCTTCCATATTGATAT
                      ____________________________________________________________
consensus             ATGTTTCTATAAGACAAGACAATAGTACATTTTCAAATGGTGAAGCTTCCATATTGATAT
 
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JMSF032P03+           ACATACCCAACCTGAAATGGCGAAGAAGCTTGTTGAGTTTCTAAAACAGAAGTGATTTCT
rJMSF007F03-          ACATACCCAACCTGAAATGGCGAAGAAGCTTGTTGAGTTTCTAAAACAGAAGTGATTTCT
                      ____________________________________________________________
consensus             ACATACCCAACCTGAAATGGCGAAGAAGCTTGTTGAGTTTCTAAAACAGAAGTGATTTCT
 
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JMSF032P03+           GGAGCAATATCCTCCGGCCCATCAACGGCGGGCTTAATCACCGCCAGGAAGAAGACATTA
rJMSF007F03-          GGAGCAATATCCTCCGGCCCATCAACGGCGGGCTTAATCACCGCCAGGAAGAAGACATTA
                      ____________________________________________________________
consensus             GGAGCAATATCCTCCGGCCCATCAACGGCGGGCTTAATCACCGCCAGGAAGAAGACATTA
 
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JMSF032P03+           TACAAAATGGTAAACAGAAAGAGAAGAATGGCCAAATTAACCAAGTCAGACGACGTAATT
rJMSF007F03-          TACAAAATGGTAAACAGAAAGAGAAGAATGGCCAAATTAACCAAGTCAGACGACGTAATT
                      ____________________________________________________________
consensus             TACAAAATGGTAAACAGAAAGAGAAGAATGGCCAAATTAACCAAGTCAGACGACGTAATT
 
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JMSF032P03+           TCTTTTGCTTCTGGAACTGGGACTTGCGTCATTCGACTCGGACCACCATTTATATCTGAA
rJMSF007F03-          TCTTTTGCTTCTGGAACTGGGACTTGCGTCATTCGACTCGGACCACCATTTATAT-----
                      ____________________________________________________________
consensus             TCTTTTGCTTCTGGAACTGGGACTTGCGTCATTCGACTCGGACCACCATTTATATCTGAA
 
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JMSF032P03+           GCTCTAATATTAGGAGGAGGGTCGGGCTTTTTCTGAGAAAGAGATTGAAGCTGTTCATCA
rJMSF007F03-          -CTCTAATATTAGGAGGAGGGTCGGGCTTTTTCTGAGAAAGAGATTGAAGCTGTTCATCA
JMSF007F03+            CTCTAATATTAGGAGGAGGGTCGGGCTTTTTCTGAGAAAGAGATTGAAGCTGTTCATCA
                      ____________________________________________________________
consensus             GCTCTAATATTAGGAGGAGGGTCGGGCTTTTTCTGAGAAAGAGATTGAAGCTGTTCATCA
 
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JMSF032P03+           AGCTTTCTCAGAGCCTCTCGGGCCTTATCCGGGTCAACTTCATAATCCGAATCTTTCTCC
rJMSF007F03-          AGCTTTCTCAGAGCCTCTCGGGCCTTATCCGGGTCAACTTCATAATCCGAATCTTTCTCC
JMSF007F03+           AGCTTTCTCAGAGCCTCTCGGGCCTTATCCGGGTCAACTTCATAATCCGAATCTTTCTCC
                      ____________________________________________________________
consensus             AGCTTTCTCAGAGCCTCTCGGGCCTTATCCGGGTCAACTTCATAATCCGAATCTTTCTCC
 
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JMSF032P03+           GCCGCTCTCAGCCTCCTCACTCCTTGTCCTCTTCTTCTTCTACTTTTCTTGAGTGCTTCC
rJMSF007F03-          GCCGCTCTCAGCCTCCTCACTCCTTGTCCTCTTCTTCTTCTACTTTTCTTGAGTGCTTCC
JMSF007F03+           GCCGCTCTCAGCCTCCTCACTCCTTGTCCTCTTCTTCTTCTACTTTTCTTGAGTGCTTCC
                      ____________________________________________________________
consensus             GCCGCTCTCAGCCTCCTCACTCCTTGTCCTCTTCTTCTTCTACTTTTCTTGAGTGCTTCC
 
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JMSF032P03+           CATCTTCCCACCCCAAACGCAGATACTGAAGCTTTGTGGGTGTTGAAGAAGAGGAAAGGA
rJMSF007F03-          CATCTTCCCACCCCAAACGCAGATACTGAAGCTTTGTGGGTGTTGAAGAAGAGGAAAGGA
JMSF007F03+           CATCTTCCCACCCCAAACGCAGATACTGAAGCTTTGTGGGTGTTGAAGAAGAGGAAAGGA
                      ____________________________________________________________
consensus             CATCTTCCCACCCCAAACGCAGATACTGAAGCTTTGTGGGTGTTGAAGAAGAGGAAAGGA
 
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JMSF032P03+           GGAGAAAAAAAGGGGTGTTTCTTATGAGATATGCAGTGATGAAGATGGAGAAGAAGCATT
rJMSF007F03-          GGAGAAAAAAAGGGGTGTTTCTTATGAGATATGCAGTGATGAAGATGGAGAAGAAGCATT
JMSF007F03+           GGAGAAAAAAAGGGGTGTTTCTTATGAGATATGCAGTGATGAAGATGGAGAAGAAGCATT
                      ____________________________________________________________
consensus             GGAGAAAAAAAGGGGTGTTTCTTATGAGATATGCAGTGATGAAGATGGAGAAGAAGCATT
 
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JMSF032P03+           TCAAGTTTCCAAGTTTCCAAGCTCAGCACAGAATG                         
rJMSF007F03-          TCAAGTTTCCAAGTTTCCAAGCTCAGCACAGAATGGAGTGGTGTGTCTGTCACTCTAGCC
JMSF007F03+           TCAAGTTTCCAAGTTTCCAAGCTCAGCACAGAATGGAGTGGTGTGTCTGTCACTCTAGCC
                      ____________________________________________________________
consensus             TCAAGTTTCCAAGTTTCCAAGCTCAGCACAGAATGGAGTGGTGTGTCTGTCACTCTAGCC