Contig 004968:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031L23Sequence516004968 (6)ref|XP_004246498.1|160PREDICTED: uncharacterized protein LOC101249753 [Solanum lycopersicum]772013748 (6)ref|XP_011004215.1|310PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMFF039O12Sequence440004968 (6)ref|XP_004246498.1|142PREDICTED: uncharacterized protein LOC101249753 [Solanum lycopersicum]741013748 (6)ref|XP_011004215.1|297PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF007E05Sequence421004968 (6)ref|XP_004246498.1|105PREDICTED: uncharacterized protein LOC101249753 [Solanum lycopersicum]745013748 (6)ref|XP_011004215.1|316PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF023H06Sequence656004968 (6)emb|CDP15441.1|4e-53unnamed protein product [Coffea canephora]742013748 (6)ref|XP_011004215.1|308PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF028I06Sequence616004968 (6)emb|CDP15441.1|1e-51unnamed protein product [Coffea canephora]713013748 (6)ref|XP_011004215.1|305PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]
JMSF045P05Sequence720004968 (6)emb|CDP15441.1|1e-52unnamed protein product [Coffea canephora]645013748 (6)ref|XP_011004215.1|275PREDICTED: uncharacterized protein LOC105110757 [Populus euphratica]

Alignment

This contig is upended


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JMSF023H06+                    TTCAGGAATGCAGTCCTCCATTGCCGGAGCAATCTTAGTTTCGCACTCTAA
JMSF045P05+                    TTCAGGAATGCAGTCCTCCATTGCCGGAGCAATCTTAGTTTCGCACTCTAA
                      ____________________________________________________________
consensus                      TTCAGGAATGCAGTCCTCCATTGCCGGAGCAATCTTAGTTTCGCACTCTAA
 
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JMSF023H06+           TTCCCTCTGTATTATCCCTTCTTCCCCAAGCAACGTCATCAGCTCCATACATAATGTCCA
JMSF028I06+                                  CCCCAAGCAACGTCATCAGCTCCATACATAATGTCCA
JMSF045P05+           TTCCCTCTGTATTATCCCTTCTTCCCCAAGCAACGTCATCAGCTCCATACATAATGTCCA
                      ____________________________________________________________
consensus             TTCCCTCTGTATTATCCCTTCTTCCCCAAGCAACGTCATCAGCTCCATACATAATGTCCA
 
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JMSF023H06+           CGCCGTCGCAAGGTCACACGCCGACGTGTGAAGCCGTAGGGCCACGGCCAACTTGTCGCC
JMSF028I06+           CGCCGTCGCAAGGTCACACGCCGACGTGTGAAGCCGTAGGGCCACGGCCAACTTGTCGCC
JMFF031L23+                                                                 GTCGCC
JMSF045P05+           CGCCGTCGCAAGGTCACACGCCGACGTGTGAAGCCGTAGGGCCACGGCCAACTTGTCGCC
                      ____________________________________________________________
consensus             CGCCGTCGCAAGGTCACACGCCGACGTGTGAAGCCGTAGGGCCACGGCCAACTTGTCGCC
 
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JMSF023H06+           GGCGACGCCGGGTAAGGTGTAAACGCTGGCGAAGAAAACGTCGCTGTCAACGTGGGATTC
JMSF028I06+           GGCGACGCCGGGTAAGGTGTAAACGCTGGCGAAGAAAACGTCGCTGTCAACGTGGGATTC
JMFF031L23+           GGCGACGCCGGGTAAGGTGTAAACGCTGGCGAAGAAAACGTCGCTGTCAACGTGGGATTC
JMSF045P05+           GGCGACGCCGGGTAAGGTGTAAACGCTGGCGAAGAAAACGTCGCTGTCAACGTGGGATTC
                      ____________________________________________________________
consensus             GGCGACGCCGGGTAAGGTGTAAACGCTGGCGAAGAAAACGTCGCTGTCAACGTGGGATTC
 
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JMSF023H06+           CGGGTCGGGGCTCTGCCAAGCGTTGCGGTTCATTTCGTGCTCGAGGATGAGGTGGAAGTC
JMSF028I06+           CGGGTCGGGGCTCTGCCAAGCGTTGCGGTTCATTTCGTGCTCGAGGATGAGGTGGAAGTC
JMFF031L23+           CGGGTCGGGGCTCTGCCAAGCGTTGCGGTTCATTTCGTGCTCGAGGATGAGGTGGAAGTC
JMFF039O12+                    GCTCTGCCAAGCGTTGCGGTTCATTTCGTGCTCGAGGATGAGGTGGAAGTC
JMSF045P05+           CGGGTCGGGGCTCTGCCAAGCGTTGCGGTTCATTTCGTGCTCGAGGATGAGGTGGAAGTC
                      ____________________________________________________________
consensus             CGGGTCGGGGCTCTGCCAAGCGTTGCGGTTCATTTCGTGCTCGAGGATGAGGTGGAAGTC
 
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JMSF023H06+           GGAGACTGAGGAGTCGCCGCCGTCCGGGGAATTTGCCAGTTCGCGGAGAATCTCCGCCGT
JMSF028I06+           GGAGACTGAGGAGTCGCCGCCGTCCGGGGAATTTGCCAGTTCGCGGAGAATCTCCGCCGT
JMFF031L23+           GGAGACTGAGGAGTCGCCGCCGTCCGGGGAATTTGCCAGTTCGCGGAGAATCTCCGCCGT
JMFF039O12+           GGAGACTGAGGAGTCGCCGCCGTCCGGGGAATTTGCCAGTTCGCGGAGAATCTCCGCCGT
JMSF045P05+           GGAGACTGAGGAGTCGCCGCCGTCCGGGGAATTTGCCAGTTCGCGGAGAATCTCCGCCGT
JMSF007E05+                                                                      T
                      ____________________________________________________________
consensus             GGAGACTGAGGAGTCGCCGCCGTCCGGGGAATTTGCCAGTTCGCGGAGAATCTCCGCCGT
 
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JMSF023H06+           CGACGCACGATCAAACGACTGGATTTTCAGGGGAGGAGTGGCGGGAGTGACGTAGGAGTA
JMSF028I06+           CGACGCACGATCAAACGACTGGATTTTCAGGGGAGGAGTGGCGGGAGTGACGTAGGAGTA
JMFF031L23+           CGACGCACGATCAAACGACTGGATTTTCAGGGGAGGAGTGGCGGGAGTGACGTAGGAGTA
JMFF039O12+           CGACGCACGATCAAACGACTGGATTTTCAGGGGAGGAGTGGCGGGAGTGACGTAGGAGTA
JMSF045P05+           CGACGCACGATCAAACGACTGGATTTTCAGGGGAGGAGTGGCGGGAGTGACGTAGGAGTA
JMSF007E05+           CGACGCACGATCAAACGACTGGATTTTCAGGGGAGGAGTGGCGGGAGTGACGTAGGAGTA
                      ____________________________________________________________
consensus             CGACGCACGATCAAACGACTGGATTTTCAGGGGAGGAGTGGCGGGAGTGACGTAGGAGTA
 
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JMSF023H06+           GAATCCCGTGGCCGGATCATGGCGGAGTTGGCAGCTGAGGATGGGATGTGCGGTTTGGAG
JMSF028I06+           GAATCCCGTGGCCGGATCATGGCGGAGTTGGCAGCTGAGGATGGGATGTGCGGTTTGGAG
JMFF031L23+           GAATCCCGTGGCCGGATCATGGCGGAGTTGGCAGCTGAGGATGGGATGTGCGGTTTGGAG
JMFF039O12+           GAATCCCGTGGCCGGATCATGGCGGAGTTGGCAGCTGAGGATGGGATGTGCGGTTTGGAG
JMSF045P05+           GAATCCCGTGGCCGGATCATGGCGGAGTTGGCAGCTGAGGATGGGATGTGCGGTTTGGAG
JMSF007E05+           GAATCCCGTGGCCGGATCATGGCGGAGTTGGCAGCTGAGGATGGGATGTGCGGTTTGGAG
                      ____________________________________________________________
consensus             GAATCCCGTGGCCGGATCATGGCGGAGTTGGCAGCTGAGGATGGGATGTGCGGTTTGGAG
 
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JMSF023H06+           TTTCCCGACGGCGTCGCTAACAACTGAAAAATCCGGCGGTTTTGAGAAGAGCAGCGCCGA
JMSF028I06+           TTTCCCGACGGCGTCGCTAACAACTGAAAAATCCGGCGGTTTTGAGAAGAGCAGCGCCGA
JMFF031L23+           TTTCCCGACGGCGTCGCTAACAACTGAAAAATCCGGCGGTTTTGAGAAGAGCAGCGCCGA
JMFF039O12+           TTTCCCGACGGCGTCGCTAACAACTGAAAAATCCGGCGGTTTTGAGAAGAGCAGCGCCGA
JMSF045P05+           TTTCCCGACGGCGTCGCTAACAACTGAAAAATCCGGCGGTTTTGAGAAGAGCAGCGCCGA
JMSF007E05+           TTTCCCGACGGCGTCGCTAACAACTGAAAAATCCGGCGGTTTTGAGAAGAGCAGCGCCGA
                      ____________________________________________________________
consensus             TTTCCCGACGGCGTCGCTAACAACTGAAAAATCCGGCGGTTTTGAGAAGAGCAGCGCCGA
 
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JMSF023H06+           AACAGTTATCCCTGTGCCGCCAGGCACCGCCTTGCACCAGGTCTGCTCGGTGCCACCCAA
JMSF028I06+           AACAGTTATCCCTGTGCCGCCAGGCACCGCCTTGCACCAGGTCTGCTCGGTGCCACCCAA
JMFF031L23+           AACAGTTATCCCTGTGCCGCCAGGCACCGCCTTGCACCAGGTCTGCTCGGTGCCACCCAA
JMFF039O12+           AACAGTTATCCCTGTGCCGCCAGGCACCGCCTTGCACCAGGTCTGCTCGGTGCCACCCAA
JMSF045P05+           AACAGTTATCCCTGTGCCGCCAGGCACCGCCTTGCACCAGGTCTGCTCGGTGCCACCCAA
JMSF007E05+           AACAGTTATCCCTGTGCCGCCAGGCACCGCCTTGCACCAGGTCTGCTCGGTGCCACCCAA
                      ____________________________________________________________
consensus             AACAGTTATCCCTGTGCCGCCAGGCACCGCCTTGCACCAGGTCTGCTCGGTGCCACCCAA
 
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JMSF023H06+           CTGGCGGCTCAGCCGCGAGTTGGCGGTGGTTGCCTGCTCCGCCGCCATGAAATTTCCGAG
JMSF028I06+           CTGGCGGCTCAGCCGCGAGTTGGCGGTGGTTGCCTGCTCCGCCGCCATGAAATTTCCGAG
JMFF031L23+           CTGGCGGCTCAGCCGCGAGTTGGCGGTGGTTGCCTGCTCCGCCGCCATGAAATTTCCGAG
JMFF039O12+           CTGGCGGCTCAGCCGCGAGTTGGCGGTGGTTGCCTGCTCCGCCGCCATGAAATTTCCGAG
JMSF045P05+           CTGGCGGCTCAGCCGCGAGTTGGCGGTGGTTGCCTGCTCCGCCGCCATGAAATTTCCGAG
JMSF007E05+           CTGGCGGCTCAGCCGCGAGTTGGCGGTGGTTGCCTGCTCCGCCGCCATGAAATTTCCGAG
                      ____________________________________________________________
consensus             CTGGCGGCTCAGCCGCGAGTTGGCGGTGGTTGCCTGCTCCGCCGCCATGAAATTTCCGAG
 
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JMSF023H06+           TGAT                                                        
JMSF028I06+           TGATGGGTTTAGAGTTTGGGGATCGGAGACAAATAATT                      
JMFF031L23+           TGATGGGTTTAGAGTTTGGGGATCGAAGAC                              
JMFF039O12+           TGATGGGTTTAGAGTTTGGGGATCGGAGA                               
JMSF045P05+           TGATGGGTTTAGAGTTTGGGGATCGGAGACAAATAATTGAAGTGTTTGCGGTAGAAGTAA
JMSF007E05+           TGATGGGTTTAGAGTTTGGGGATCGGAGACAAATAATTGAAGTGTTTGCGGTAGAAGTAA
                      ____________________________________________________________
consensus             TGATGGGTTTAGAGTTTGGGGATCGGAGACAAATAATTGAAGTGTTTGCGGTAGAAGTAA
 
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JMSF045P05+           AGATACTT                                                    
JMSF007E05+           AGATACTTATTGAATCAGGACCACTAGAATTCGTTTGAGTACACGTTAGTAGATTGATCC
                      ____________________________________________________________
consensus             AGATACTTATTGAATCAGGACCACTAGAATTCGTTTGAGTACACGTTAGTAGATTGATCC