| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF040D03 | Sequence | 528 | 004965 (3) | emb|CDP07525.1| | 2e-62 | unnamed protein product [Coffea canephora] | 763 | 004149 (4) | ref|XP_002510373.1| | 3e-87 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gb|EEF5 |
| JMFF048O07 | Sequence | 512 | 004965 (3) | emb|CDP07525.1| | 5e-53 | unnamed protein product [Coffea canephora] | 530 | 004149 (4) | ref|XP_007017515.1| | 1e-39 | Glucan endo-1,3-beta-glucosidase 7-beta-glucanase 7 isoform 2 [Theobroma cacao] |
| JMSF007A07 | Sequence | 211 | 004965 (3) | 798 | 004149 (4) | ref|XP_002510373.1| | 5e-72 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gb|EEF5 | |||
This contig is upended
. : . : . : . : . : . :
JMFF040D03+ ACCTTGATTTTCCCGGCGAGGGAAGCAGCGCC
____________________________________________________________
consensus ACCTTGATTTTCCCGGCGAGGGAAGCAGCGCC
. : . : . : . : . : . :
JMFF040D03+ GAGGGCGTTCTCCATGTTCTGCATCGCCGGCAGGAGCTGCGTCATCAGATTCCGGTCGCC
JMFF048O07+ CGGCAGGAGCTGCGTCATCAGATTCCGGTCGCC
____________________________________________________________
consensus GAGGGCGTTCTCCATGTTCTGCATCGCCGGCAGGAGCTGCGTCATCAGATTCCGGTCGCC
. : . : . : . : . : . :
JMFF040D03+ CGAGTACAGGATCTCGTTCCCAACGTTTATGGTCGTGATCTTACTCGCCGGGTAGAACGC
JMFF048O07+ CGAGTACAGGATCTCGTTCCCAACGTTTATGGTCGTGATCTTACTCGCCGGGTAGAACGC
____________________________________________________________
consensus CGAGTACAGGATCTCGTTCCCAACGTTTATGGTCGTGATCTTACTCGCCGGGTAGAACGC
. : . : . : . : . : . :
JMFF040D03+ AAGCACATTGGCCGCCACCCAGTTCTTGGCAACCCCGGGGTCGGAGGCCATCGCCGGAAT
JMFF048O07+ AAGCACATTGGCCGCCACCCAGTTCTTGGCAACCCCGGGGTCGGAGGCCATCGCCGGAAT
____________________________________________________________
consensus AAGCACATTGGCCGCCACCCAGTTCTTGGCAACCCCGGGGTCGGAGGCCATCGCCGGAAT
. : . : . : . : . : . :
JMFF040D03+ GTCGCCGTTAGCCACCCCGATCATAATCCCGATACACGTGTCGGCCAACGCCCTGATCAT
JMFF048O07+ GTCGCCGTTAGCCACCCCGATCATAATCCCGATACCCGTGTCGGCCAACGCCCTGATCAT
____________________________________________________________
consensus GTCGCCGTTAGCCACCCCGATCATAATCCCGATACCCGTGTCGGCCAACGCCCTGATCAT
. : . : . : . : . : . :
JMFF040D03+ CGCCGGGTCCGCTCCGTACAACCTCACCCTCTCAATCGACGTAGACTCCAGCAGCTTCGC
JMFF048O07+ CGCCGGGTCCGCTCCGTACAACCTCACCCTCTCAATCGACGTAGACTCCAGCAGCTTCGC
____________________________________________________________
consensus CGCCGGGTCCGCTCCGTACAACCTCACCCTCTCAATCGACGTAGACTCCAGCAGCTTCGC
. : . : . : . : . : . :
JMFF040D03+ CGTCGCCTCCGGCGCCGGAAGATTATCCGCCACCTGCCCATAATTCACTCCAATAAACGA
JMFF048O07+ CGTCGCCTCCGGCGCCGGAAGATTATCCGCCACCTGCCCATAATTCACTCCAATAAACGA
JMSF007A07+ CCACCTGCCCATAATTCACTCCAATAAACGA
____________________________________________________________
consensus CGTCGCCTCCGGCGCCGGAAGATTATCCGCCACCTGCCCATAATTCACTCCAATAAACGA
. : . : . : . : . : . :
JMFF040D03+ CTGCGCCGCTGTTAGATGGAGGAGTAAGAGAAAGAAGAAAGATGAAGTGAAAAGCGGAGT
JMFF048O07+ CTGCGCCGCTGTTAGATGGAGGAGTAAGAGAAAGAAGAAAGATGAAGTGAAAACCGCAGT
JMSF007A07+ CTGCGCCGCTGTTAGATGGAGGAGTAAGAGAAAGAAGAAAGATGAAGTGAAAAGCGGAGT
____________________________________________________________
consensus CTGCGCCGCTGTTAGATGGAGGAGTAAGAGAAAGAAGAAAGATGAAGTGAAAAGCGGAGT
. : . : . : . : . : . :
JMFF040D03+ TGCCATACTCTTGTCTGTGTTTGCTTTTGGGAAGAAAATATGATGACGACGGTGGTGATG
JMFF048O07+ TGCCATAATCTTGTCTGTGTTTGCTTTTGGGAAGAAAATATGATGACGACGGTGGTGATG
JMSF007A07+ TGCCATACTCTTGTCTGTGTTTGCTTTTGGGAAGAAAATATGATGACGACGGTGGTGATG
____________________________________________________________
consensus TGCCATACTCTTGTCTGTGTTTGCTTTTGGGAAGAAAATATGATGACGACGGTGGTGATG
. : . : . : . : . : . :
JMFF040D03+ AGGAAAGAAAGAAAGT
JMFF048O07+ AGGAAAGAAAGAAAGTGAGAGTAGAAGAAGATAGACAGTGAGAAGCAGATAAAGGAG
JMSF007A07+ AGGAAAGAAAGAAAGTGAGAGTAGAAGAAGATAGACAGTGAGAAGCAGATAAAGGAGCCC
____________________________________________________________
consensus AGGAAAGAAAGAAAGTGAGAGTAGAAGAAGATAGACAGTGAGAAGCAGATAAAGGAGCCC