Contig 004962:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006N03Sequence345004962 (2)ref|XP_010038946.1|7e-09PREDICTED: ubiquitin-like modifier-activating enzyme atg7 [Eucalyptus grandis]
JMSF041M04Sequence771004962 (2)ref|XP_004251096.1|4e-108PREDICTED: ubiquitin-like modifier-activating enzyme atg7 [Solanum lycopersicum631012724 (2)gb|KDO77837.1|2e-92hypothetical protein CISIN_1g005071mg [Citrus sinensis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+                               GGCCTTAGAGTGAAATGAGAATTTGAAGCAATAGATACGA
                      ____________________________________________________________
consensus                                 GGCCTTAGAGTGAAATGAGAATTTGAAGCAATAGATACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           GGAAAAATGGAACATCTGTTCTGGAACTTGTGTTACGCCAATCATTGCAAGCTGCGGTTA
                      ____________________________________________________________
consensus             GGAAAAATGGAACATCTGTTCTGGAACTTGTGTTACGCCAATCATTGCAAGCTGCGGTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           AGTATTCAACCTGCACGGGGCTGAAGCACTGGGAAGCTGGCTTCAAATCAACTAATGTTG
                      ____________________________________________________________
consensus             AGTATTCAACCTGCACGGGGCTGAAGCACTGGGAAGCTGGCTTCAAATCAACTAATGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           CAGGAGGATCAAGAACTAGAGCAGGGAACGCAAGCCAATAGTGGAAGCTCCACTTCTTCA
                      ____________________________________________________________
consensus             CAGGAGGATCAAGAACTAGAGCAGGGAACGCAAGCCAATAGTGGAAGCTCCACTTCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           AGTCTGCAAATGATATAATCAAGAATCTCAAAAGCAGACCACTATCTTCCTCCACTTTAC
                      ____________________________________________________________
consensus             AGTCTGCAAATGATATAATCAAGAATCTCAAAAGCAGACCACTATCTTCCTCCACTTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           CAGAGTGAATGTCATCCCATATCTTTTTAGCTTCTTCCTTTATTAGGCTTTGCTTATCAA
                      ____________________________________________________________
consensus             CAGAGTGAATGTCATCCCATATCTTTTTAGCTTCTTCCTTTATTAGGCTTTGCTTATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           GTGCGTGGAAGGCCTCCAATGTGTTTGTGTTGTAAAGGGTGCCAGGAATAGGGCATCGGT
                      ____________________________________________________________
consensus             GTGCGTGGAAGGCCTCCAATGTGTTTGTGTTGTAAAGGGTGCCAGGAATAGGGCATCGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           TCCTATTCCCCTTACTTCTCAGATTCGATTGCGATTGTTCACCATGCTCAGGTGGCAAAG
                      ____________________________________________________________
consensus             TCCTATTCCCCTTACTTCTCAGATTCGATTGCGATTGTTCACCATGCTCAGGTGGCAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           ATTCAGAAAGAAGAGTCAAGTGATTAGAAACTTGACGATACGAGCAAGGTGCATAAAAAC
                      ____________________________________________________________
consensus             ATTCAGAAAGAAGAGTCAAGTGATTAGAAACTTGACGATACGAGCAAGGTGCATAAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           CAGTGATGGGAATTGGGGAATCATCGAGCCCCAACTGGTTGAGCTTGAGCGAAGAGAATC
JMSF006N03+                          GGGAATCATCGAGCCCCAACTGGTTGAGCTTGAGCGAAGAGAATC
                      ____________________________________________________________
consensus             CAGTGATGGGAATTGGGGAATCATCGAGCCCCAACTGGTTGAGCTTGAGCGAAGAGAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           TGTGCCAGAAACCCACATCTACCAAGCTCTGAAACGGCGAGAATTGAAGAACCTTGCTTG
JMSF006N03+           TGTGCCAGAAACCCACATCTACCAAGCTCTGAAACGGCGAGAATTGAAGAACCTTGCTTG
                      ____________________________________________________________
consensus             TGTGCCAGAAACCCACATCTACCAAGCTCTGAAACGGCGAGAATTGAAGAACCTTGCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           CCTTCTTCGCATCATCGCCCATGCCTCCGATTTGCCTTTTCTTTAAATTACTATTATTGC
JMSF006N03+           CCTTCTTCGCATCATCGCCCATGCCTCCGATTTGCCTTTTCTTTAAATTACTATTATTGC
                      ____________________________________________________________
consensus             CCTTCTTCGCATCATCGCCCATGCCTCCGATTTGCCTTTTCTTTAAATTACTATTATTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           TTCAGATGCATCAATGGCGTCTTTGCTTTAAGCTATTTTCTTTTCTTGCAGTCTTGCACA
JMSF006N03+           TTCAGATGCATCAATGGCGTCTTTGCTTTAAGCTATTTTCTTTTCTTGCAGTCTTGCACA
                      ____________________________________________________________
consensus             TTCAGATGCATCAATGGCGTCTTTGCTTTAAGCTATTTTCTTTTCTTGCAGTCTTGCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041M04+           ACAAAACAAT                                                  
JMSF006N03+           ACAAAACAATAATTTTAAACTGTGAAATACAAACAGTTGTTTTATTCCCTTCCTTGACTC
                      ____________________________________________________________
consensus             ACAAAACAATAATTTTAAACTGTGAAATACAAACAGTTGTTTTATTCCCTTCCTTGACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF006N03+           CAGTCTCCAACCAGATTTAAACCTCTGAAGTTCAGAAAAGTTTTACACCAAAAAGGAACC
                      ____________________________________________________________
consensus             CAGTCTCCAACCAGATTTAAACCTCTGAAGTTCAGAAAAGTTTTACACCAAAAAGGAACC