Contig 004954:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005O06Sequence305004954 (5)105012272 (3)
JMSF026I13Sequence671004954 (5)ref|XP_008790739.1|2e-07PREDICTED: uncharacterized protein LOC103707842 isoform X2 [Phoenix dactylifera803004954 (5)ref|XP_008443495.1|120PREDICTED: uncharacterized protein LOC103487072 [Cucumis melo]
JMSF053K17Sequence671004954 (5)ref|XP_008790739.1|2e-07PREDICTED: uncharacterized protein LOC103707842 isoform X2 [Phoenix dactylifera975004954 (5)ref|XP_008443495.1|120PREDICTED: uncharacterized protein LOC103487072 [Cucumis melo]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF026I13- TGGCTTTGTCTTTTGCTTTCTATCAAGCCAACTTCTCA
rJMSF053K17- TATCTTAAAAATGGCTTTGTCTTTTGCTTTCTATCAAGCCAACTTCTCA
                      ____________________________________________________________
consensus TATCTTAAAAATGGCTTTGTCTTTTGCTTTCTATCAAGCCAACTTCTCA
 
. : . : . : . : . : . :
rJMSF026I13- AGATTAATAATAAATGCTGCTGCAACCGCCTCTCATCATCTCAAACTTCCATCGTATGTA
rJMSF053K17- AGATTAATAATAAATGCTGCTGCAACCGCCTCTCATCATCTCAAACTTCCATCGTATGTA
                      ____________________________________________________________
consensus AGATTAATAATAAATGCTGCTGCAACCGCCTCTCATCATCTCAAACTTCCATCGTATGTA
 
. : . : . : . : . : . :
rJMSF026I13- CAGGTATAAGAAAATGAACCCAAAACACAGTGAAAGCCAAAGAAACTTGCTACGGCTTGT
rJMSF053K17- CAGGTATAAGAAAATGAACCCAAAACACAGTGAAAGCCAAAGAAACTTGCTACGGCTTGT
                      ____________________________________________________________
consensus CAGGTATAAGAAAATGAACCCAAAACACAGTGAAAGCCAAAGAAACTTGCTACGGCTTGT
 
. : . : . : . : . : . :
rJMSF026I13- AATTTGTTAGGATCCCTGCACAAGACCCTCCCTAGGAACATTGGTCACTCGAAGGACAGC
rJMSF053K17- AATTTGTTAGGATCCCTGCACAAGACCCTCCCTAGGAACATTGGTCACTCGAAGGACAGC
                      ____________________________________________________________
consensus AATTTGTTAGGATCCCTGCACAAGACCCTCCCTAGGAACATTGGTCACTCGAAGGACAGC
 
. : . : . : . : . : . :
rJMSF026I13- TTGAGCGTTCAAGGGTGAGAGCTTTGATTGGCAAAATTGCTCCCAAGAAATTGCTTCTTG
rJMSF053K17- TTGAGCGTTCAAGGGTGAGAGCTTTGATTGGCAAAATTGCTCCCAAGAAATTGCTTCTTG
                      ____________________________________________________________
consensus TTGAGCGTTCAAGGGTGAGAGCTTTGATTGGCAAAATTGCTCCCAAGAAATTGCTTCTTG
 
. : . : . : . : . : . :
rJMSF026I13- ATCTTCAGTCACTGTTGTTGTTATCTTCTCATAGACACTTTGCAGCTCCAATAAAAGAGC
rJMSF053K17- ATCTTCAGTCACTGTTGTTGTTATCTTCTCATAGACACTTTGCAGCTCCAATAAAAGAGC
JMSF053K17+ CATAGACACTTTGCAGCTCCAATAAAAGAGC
JMSF026I13+ CATAGACACTTTGCAGCTCCAATAAAAGAGC
                      ____________________________________________________________
consensus ATCTTCAGTCACTGTTGTTGTTATCTTCTCATAGACACTTTGCAGCTCCAATAAAAGAGC
 
. : . : . : . : . : . :
rJMSF026I13- ACGGGCAGCTTCCCTAGACTCAGGAAGTTGGTCACTAAGCTGAGATGCAGCAAATTGGAT
rJMSF053K17- ACGGGCAGCTTCCCTAGACTCAGGAAGTTGGTCACTAAGCTGAGATGCAGCAAATTGGAT
JMSF053K17+ ACGGGCAGCTTCCCTAGACTCAGGAAGTTGGTCACTAAGCTGAGATGCAGCAAATTGGAT
JMSF026I13+ ACGGGCAGCTTCCCTAGACTCAGGAAGTTGGTCACTAAGCTGAGATGCAGCAAATTGGAT
                      ____________________________________________________________
consensus ACGGGCAGCTTCCCTAGACTCAGGAAGTTGGTCACTAAGCTGAGATGCAGCAAATTGGAT
 
. : . : . : . : . : . :
rJMSF026I13- CAACTTGTCTAGACCATAAGCTTCAATTCCCTCAACTCCTTGAGAATCATAGCTGCTGAG
rJMSF053K17- CAACTTGTCTAGACCATAAGCTTCAATTCCCTCAACTCCTTGAGAATCATAGCTGCTGAG
JMSF053K17+ CAACTTGTCTAGACCATAAGCTTCAATTCCCTCAACTCCTTGAGAATCATAGCTGCTGAG
JMSF026I13+ CAACTTGTCTAGACCATAAGCTTCAATTCCCTCAACTCCTTGAGAATCATAGCTGCTGAG
                      ____________________________________________________________
consensus CAACTTGTCTAGACCATAAGCTTCAATTCCCTCAACTCCTTGAGAATCATAGCTGCTGAG
 
. : . : . : . : . : . :
rJMSF026I13- AGTTGTGTTGTTGTATCTCTGGGAGAGAACAACCCTAATCATAAATTCTTTATATTGATA
rJMSF053K17- AGTTGTGTTGTTGTATCTCTGGGAGAGAACAACCCTAATCATAAATTCTTTATATTGATA
JMSF053K17+ AGTTGTGTTGTTGTATCTCTGGGAGAGAACAACCCTAATCATAAATTCTTTATATTGATA
JMSF026I13+ AGTTGTGTTGTTGTATCTCTGGGAGAGAACAACCCTAATCATAAATTCTTTATATTGATA
                      ____________________________________________________________
consensus AGTTGTGTTGTTGTATCTCTGGGAGAGAACAACCCTAATCATAAATTCTTTATATTGATA
 
. : . : . : . : . : . :
rJMSF026I13- CCGGATCAAGGTCAATATAAGTTGGACAAATCGAGCATTTGAATGCGTAGAGTAGTAATA
rJMSF053K17- CCGGATCAAGGTCAATATAAGTTGGACAAATCGAGCATTTGAATGCGTAGAGTAGTAATA
JMSF053K17+ CCGGATCAAGGTCAATATAAGTTGGACAAATCGAGCATTTGAATGCGTAGAGTAGTAATA
JMSF026I13+ CCGGATCAAGGTCAATATAAGTTGGACAAATCGAGCATTTGAATGCGTAGAGTAGTAATA
                      ____________________________________________________________
consensus CCGGATCAAGGTCAATATAAGTTGGACAAATCGAGCATTTGAATGCGTAGAGTAGTAATA
 
. : . : . : . : . : . :
rJMSF026I13- TGAAACAGAGATGCCAAATCATGAAACCCAGCTTCTCTTCTGCCTGTAATTCTCATGAAC
rJMSF053K17- TGAAACAGAGATGCCAAATCATGAAACCCAGCTTCTCTTCTGCCTGTAATTCTCATGAAC
JMSF053K17+ TGAAACAGAGATGCCAAATCATGAAACCCAGCTTCTCTTCTGCCTGTAATTCTCATGAAC
JMSF026I13+ TGAAACAGAGATGCCAAATCATGAAACCCAGCTTCTCTTCTGCCTGTAATTCTCATGAAC
                      ____________________________________________________________
consensus TGAAACAGAGATGCCAAATCATGAAACCCAGCTTCTCTTCTGCCTGTAATTCTCATGAAC
 
. : . : . : . : . : . :
rJMSF026I13- AATAGGCTATTTCCCTAAACTCATTGTCCTCATCGGCTAATTTATTGTACAATCTTTTCT
rJMSF053K17- AATAGGCTATTTCCCTAAACTCATTGTCCTCATCGGCTAATTTATTGTACAATCTTTTCT
JMSF053K17+ AATAGGCTATTTCCCTAAACTCATTGTCCTCATCGGCTAATTTATTGTACAATCTTTTCT
JMSF026I13+ AATAGGCTATTTCCCTAAACTCATTGTCCTCATCGGCTAATTTATTGTACAATCTTTTCT
                      ____________________________________________________________
consensus AATAGGCTATTTCCCTAAACTCATTGTCCTCATCGGCTAATTTATTGTACAATCTTTTCT
 
. : . : . : . : . : . :
rJMSF026I13- TCTAGATCATATGCTATCTCTACTTGTTTCCTGGTATAGTAGCTCTAGAATCATGAGCTG
rJMSF053K17- TCTAGATCATATGCTATCTCTACTTGTTTCCTGGTATAGTAGCTCTAGAATCATGAGCTG
JMSF053K17+ TCTAGATCATATGCTATCTCTACTTGTTTCCTGGTATAGTAGCTCTAGAATCATGAGCTG
JMSF026I13+ TCTAGATCATATGCTATCTCTACTTGTTTCCTGGTATAGTAGCTCTAGAATCATGAGCTG
JMSF005O06+ GTAGCTCTAGAATCATGAGCTG
                      ____________________________________________________________
consensus TCTAGATCATATGCTATCTCTACTTGTTTCCTGGTATAGTAGCTCTAGAATCATGAGCTG
 
. : . : . : . : . : . :
rJMSF026I13- TGGCTCGGGCANGG--GTTTCGAAATTGGGATTTCTAGTG
rJMSF053K17- TGGCTCGGGCAAGG-GTTTTCGAAATTGGGATTTCTAGTGGAAAATGCGATGAAGACCTA
JMSF053K17+ TGGCTCGGGCAAGG-GTTTTCGAAATTGGGATTTCTAGT-GAAAATGCGATGAAGACCTA
JMSF026I13+ TGGCTCGGGCAAGG-GTTTTCGAAATTGGGATTTCTAGT-GAAAATGCGATGAAGACCTA
JMSF005O06+ TGGCTCGGGCAAGGATTTTTCGAAATACCAATTTCTAGT-GAAAATACGATGAAGACCTA
                      ____________________________________________________________
consensus TGGCTCGGGCAAGG-GTTTTCGAAATTGGGATTTCTAGT-GAAAATGCGATGAAGACCTA
 
. : . : . : . : . : . :
rJMSF053K17- GGTGAAAGGAGGCTCAGGCGCGGGCAGTCTTCATCGCGGTAAACCGGGAGGTCTGTGATT
JMSF053K17+ GGTGAAAGGAGGCTCAGGCGCGGGCAGTCTTCATCGCGGTAAACC-GGAGGTCTGTGATT
JMSF026I13+ GGTGAAAGGAGGCTCAGGCGCGGGCAGTCTTCATCGCGGTAAACC-GGAGGTCTGTGATT
JMSF005O06+ GGTGAAAGGATGCTCAGGCGTGGGAAGTCTTCATCGCGGTAAACC-AGAGGTGTGTGATT
                      ____________________________________________________________
consensus GGTGAAAGGAGGCTCAGGCGCGGGCAGTCTTCATCGCGGTAAACC-GGAGGTCTGTGATT
 
. : . : . : . : . : . :
rJMSF053K17- CTTCTTGCTTCCGATGAAANGGAGGCTCAGGCGCGGGCAGTCTTCATCGCGCT-AACGGG
JMSF053K17+ CTTCTTGCTTCCGATGAAA-GGAGGCTCAGGCGCGGGCAGTCTTCATCGCGCTAAACGGG
JMSF026I13+ CTTCTTGCTTCCGATGAAA-GGAGGCTCAGGCGCGGGCAGTCTTCATCGCGCTAAACGGG
JMSF005O06+ CTTCTTGCTTCCGATGAAA-GGAGGCTCAGGCGCGGGCAGTCTTCATCGCGGTAAACCGG
                      ____________________________________________________________
consensus CTTCTTGCTTCCGATGAAA-GGAGGCTCAGGCGCGGGCAGTCTTCATCGCGCTAAACGGG
 
. : . : . : . : . : . :
rJMSF053K17- AGGGGTGTGATTCTTCTTACTTCCGATG
JMSF053K17+ AGGTGTGTGATTCTTCTTACTTCCGATGAAAGGATGCTCA
JMSF026I13+ AGGTGTGTGATTCTTCTTACTTCCGATGAAAGGATGCTCA
JMSF005O06+ AGGTGTGTGATTCTTCTTGCTTCCGATGAAAGGAGGCTCAAGCGCGAGCAGTCTTCATCC
                      ____________________________________________________________
consensus AGGTGTGTGATTCTTCTTACTTCCGATGAAAGGATGCTCAAGCGCGAGCAGTCTTCATCC