Contig 004953:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022J07Sequence358004953 (6)
JMFF030A05Sequence542004953 (6)ref|XP_010266269.1|115PREDICTED: uncharacterized protein LOC104603812 [Nelumbo nucifera]
JMFF035F09Sequence539004953 (6)ref|XP_010266269.1|111PREDICTED: uncharacterized protein LOC104603812 [Nelumbo nucifera]
JMFF040N08Sequence406004953 (6)
JMSF005N09Sequence313004953 (6)
JMSF022B09Sequence703004953 (6)gb|EYU40485.1|1e-37hypothetical protein MIMGU_mgv1a021713mg, partial [Erythranthe guttata]105020379

Alignment

This contig is upended


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JMSF022B09+              GGCCGCAGATGAGATGCCAACCGGATATCGAGTGCTCCATATTTAATTAGCTAGCTA
                      ____________________________________________________________
consensus                GGCCGCAGATGAGATGCCAACCGGATATCGAGTGCTCCATATTTAATTAGCTAGCTA
 
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JMSF022B09+           GCTCGCTAGCGAGAGAAGGTTCTTCTGGTCTGATCATCAAAATTTTTGGAGTAATCCAAA
                      ____________________________________________________________
consensus             GCTCGCTAGCGAGAGAAGGTTCTTCTGGTCTGATCATCAAAATTTTTGGAGTAATCCAAA
 
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JMSF022B09+           GAGTCGTAGCGGAAAGTTTGAGGGAGGCCCTCAGACCCCATCAGCCTTCTCCTTAACTCA
JMFF035F09+                                                              CTTAACTCA
JMFF030A05+                                                              CTTAACTCA
                      ____________________________________________________________
consensus             GAGTCGTAGCGGAAAGTTTGAGGGAGGCCCTCAGACCCCATCAGCCTTCTCCTTAACTCA
 
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JMSF022B09+           AACTTAACCTTGTAGAACACATGCCTCCAGCTGCCCTTGCTGTGGCACCCCAGCGCCGCC
JMFF035F09+           AACTTAACCTTGTAGAACACATGCCTCCAGCTGCCCTTGCTGTGGAACCCCAGCGCCGCC
JMFF030A05+           AACTTAACCTTGTAGAACACATGCCTCCAGCTGCCCTTGCTGTGGCACCCCAGCGCCGCC
                      ____________________________________________________________
consensus             AACTTAACCTTGTAGAACACATGCCTCCAGCTGCCCTTGCTGTGGCACCCCAGCGCCGCC
 
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JMSF022B09+           TTCTCATCTTCGTTCATCTCCAGATCCTTAGCGAAGGTGGGCTTCCTTGTCAGGATCCAG
JMFF035F09+           TTCTCATCTTCGTTCATCTCCAGATCCTTAGCGAAGGTGGGCTTCCTTGTCAGGATCCAG
JMFF030A05+           TTCTCATCTTCGTTCATCTCCAGATCCTTAGCGAAGGTGGGCTTCCTTGTCAGGATCCAG
                      ____________________________________________________________
consensus             TTCTCATCTTCGTTCATCTCCAGATCCTTAGCGAAGGTGGGCTTCCTTGTCAGGATCCAG
 
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JMSF022B09+           GACCACCCCCAGTCCCACCACCTTCTGATGGACACGAACCCATCGGCCGCCCTCGCCCTC
JMFF035F09+           GACCACCCCCAGTCCCACCACCTTCTGATGGACACGAACCCATCGGCCGCCCTCGCCCTC
JMFF030A05+           GACCACCCCCAGTCCCACCACCTTCTGATGGACACGAACCCATCGGCCGCCCTCGCCCTC
JMFF022J07+                                                                  CCCTC
JMFF040N08+                        CCCACCACCTTCTGATGGACACGAACCCATCGGCCGCCCTCGCCCTC
                      ____________________________________________________________
consensus             GACCACCCCCAGTCCCACCACCTTCTGATGGACACGAACCCATCGGCCGCCCTCGCCCTC
 
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JMSF022B09+           ATGTGCTCCACATCCCCCATAGATTTAGATCTCCGGAATGCCGCTCCCAACGAAGACGCA
JMFF035F09+           ATGTGCTCCACATCCCCCATAGATTTAGATCTCCGGAATGCCGCTCCCAACGAAGACGCA
JMFF030A05+           ATGTGCTCCACATCCCCCATAGATTTAGATCTCCGGAATGCCGCTCCCAACGAAGACGCA
JMFF022J07+           ATGTGCTCCACATCCCCCATAGATTTAGATCTCCGGAATGCCGCTCCCAACGAAGACGCA
JMFF040N08+           ATGTGCTCCACATCCCCCATAGATTTAGATCTCCGGAATGCCGCTCCCAACGAAGACGCA
JMSF005N09+                                                          CAACGAAGACGCA
                      ____________________________________________________________
consensus             ATGTGCTCCACATCCCCCATAGATTTAGATCTCCGGAATGCCGCTCCCAACGAAGACGCA
 
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JMSF022B09+           GATGATGAGATCAACGTTGTAGGGGTTTGTACAGAGTAGAGAGAGGAGAGTCTTTTGC--
JMFF035F09+           GATGATGAGATCAACGTTGTAGGGGTTTGTACAGAGTAGAGAGAGGAGAGTCTTTTGCGG
JMFF030A05+           GATGATGAGATCAACGTTGTAGGGGTTTGTACAGAGTAGAGAGAGGAGAGTCTTTTGCGG
JMFF022J07+           GATGATGAGATCAACGTTGTAGGGGTTTGTACAGAGTAGAGAGAGGAGAGTCTTTTGCGG
JMFF040N08+           GATGATGAGATCAACGTTGTAGGGGTTTGTACAGAGTAGAGAGAGGAGAGTCTTTTGCGG
JMSF005N09+           GATGATGAGATCAACGTTGTAGGGGTTTGTACAGAGTAGAGAGAGGAGAGTCTTTTGCGG
                      ____________________________________________________________
consensus             GATGATGAGATCAACGTTGTAGGGGTTTGTACAGAGTAGAGAGAGGAGAGTCTTTTGCGG
 
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JMSF022B09+           --GCCTTCTCCTCCTCCTCCGGGCTGTGAAACTGGCAGTGCAGCTTGCTCTTGCTTAAAC
JMFF035F09+           ATGCCTTCTCCTCCTCCTCCGGGCTGTGAAACTGGCAGTGCAGCTTGCTCTTGCTTAAAC
JMFF030A05+           ATGCCTTCTCCTCCTCCTCCGGGCTGTGAAACTGGCAGTGCAGCTTGCTCTTGCTTAAAC
JMFF022J07+           ATGCCTTCTCCTCCTCCTCCGGGCTGTGAAACTGGCAGTGCAGCTTGCTCTTGCTTAAAC
JMFF040N08+           ATGCCTTCTCCTCCTCCTCCGGGCTGTGAAACTGGCAGTGCAGCTTGCTCTTGCTTAAAC
JMSF005N09+           ATGCCTTCTCCTCCTCCTCCGGGCTGTGAAACTGGCAGTGCAGCTTGCTCTTGCTTAAAC
                      ____________________________________________________________
consensus             ATGCCTTCTCCTCCTCCTCCGGGCTGTGAAACTGGCAGTGCAGCTTGCTCTTGCTTAAAC
 
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JMSF022B09+           ATGATTGATAATCCTGTTGAACGTGATTTGCTTTTCTACCAAGCAAAATCACCCACGCAT
JMFF035F09+           ATGATTGATAATCCTGTTGAACGTGATTTGCTTTTCTACCAAGCAAAATCACCCACGCAT
JMFF030A05+           ATGATTGATAATCCTGTTGAACGTGATTTGCTTTTCTACCAAGCAAAATCACCCACGCAT
JMFF022J07+           ATGATTGATAATCCTGTTGAACGTGATTTGCTTTTCTACCAAGCAAAATCACCCACGCAT
JMFF040N08+           ATGATTGATAATCCTGTTGAACGTGATTTGCTTTTCTACCAAGCAAAATCACCCACGCAT
JMSF005N09+           ATGATTGATAATCCTGTTGAACGTGATTTGCTTTTCTACCAAGCAAAATCACCCACGCAT
                      ____________________________________________________________
consensus             ATGATTGATAATCCTGTTGAACGTGATTTGCTTTTCTACCAAGCAAAATCACCCACGCAT
 
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JMSF022B09+           CAATCTATCTATCTATTGATCTAGCTAAGCAATTCAAGCTACACTTAGAGGGAAGTGTGT
JMFF035F09+           CAATCTATCTATCTATTGATCTAGCTAAGCAATTCAAGCTACACTTAGAGGG-AGTGTGT
JMFF030A05+           CAATCTATCTATCTATTGATCTAGCTAAGCAATTCAAGCTACACTTAGAGGGAAGTGTGT
JMFF022J07+           CAATCTATCTATCTATTGATCTAGCTAAGCAATTCAAGCTACACTTAGAGGGAAGTGTGT
JMFF040N08+           CAATCTATCTATCTATTGATCTAGCTAAGCAATTCAAGCTACACTTAGAGGGAAGTGTGT
JMSF005N09+           CAATCTATCTATCTATTGATCTAGCTAAGCAATTCAAGCTACACTTAGAGGGAAGTGTGT
                      ____________________________________________________________
consensus             CAATCTATCTATCTATTGATCTAGCTAAGCAATTCAAGCTACACTTAGAGGGAAGTGTGT
 
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JMSF022B09+           CGCGCTTCTCTCTCTATACTGCTATTGCGGTCGATGAGTTTAGACTTT            
JMFF035F09+           CGCGCT--TCTCTCTATACTGCTATTGCGGTCGATGAGTTTAGACTTTAGAAT       
JMFF030A05+           CGCGCTTCTCTCTCTATACTGCTATTGCGGTCGATGAGTTTAGACTTTAGAAT       
JMFF022J07+           CGCGCTTCTCTCTCTATACTGCTATTGCGGTCGATGAGTTTAGACTTTAGAAT       
JMFF040N08+           CGCGCTTCTCTCTCTATACTGCTATTGCGGTCGATGAGTTTAGACTTTAGAAT       
JMSF005N09+           CGCGCTTCTCTCTCTATACTGCTATTGCGGTCGATGAGTTTAGACTTTAGAATGAAACCC
                      ____________________________________________________________
consensus             CGCGCTTCTCTCTCTATACTGCTATTGCGGTCGATGAGTTTAGACTTTAGAATGAAACCC