Contig 004950:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047B03Sequence645004950 (3)ref|XP_010266820.1|4e-71PREDICTED: synaptotagmin-2-like [Nelumbo nucifera]260002703 (3)ref|XP_006422611.1|9e-11hypothetical protein CICLE_v10028159mg [Citrus clementina] gb|ESR35851.1| hypoth
JMSF005K01Sequence396004950 (3)emb|CDO96921.1|4e-34unnamed protein product [Coffea canephora]479002703 (3)emb|CDO96921.1|2e-64unnamed protein product [Coffea canephora]
JMSF011D03Sequence296004950 (3)ref|XP_010266820.1|5e-04PREDICTED: synaptotagmin-2-like [Nelumbo nucifera]731002703 (3)ref|XP_011088598.1|6e-108PREDICTED: synaptotagmin-1-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF047B03+                          TGAGTAGTTGCTTTCAACCCAAATGCTTAACAGCACCCAGTACCA
                      ____________________________________________________________
consensus                            TGAGTAGTTGCTTTCAACCCAAATGCTTAACAGCACCCAGTACCA
 
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JMFF047B03+           TTAGGATTCCCTGCCCATTTGAATGATGGCTCCATGATTAACTCTTTCTCATCAGTAACA
                      ____________________________________________________________
consensus             TTAGGATTCCCTGCCCATTTGAATGATGGCTCCATGATTAACTCTTTCTCATCAGTAACA
 
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JMFF047B03+           TAGACCTTCATACCTGNCAGAGTGNGAGGCAATGACCCCAGAGTCAGTGTTTCAAATTCG
                      ____________________________________________________________
consensus             TAGACCTTCATACCTGNCAGAGTGNGAGGCAATGACCCCAGAGTCAGTGTTTCAAATTCG
 
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JMFF047B03+           ACAGAGTCAATCTTATACTTTGGAATTTGCTCTGCAATTATTGGTGTAGCAATGGTCTTT
                      ____________________________________________________________
consensus             ACAGAGTCAATCTTATACTTTGGAATTTGCTCTGCAATTATTGGTGTAGCAATGGTCTTT
 
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JMFF047B03+           ACCATCCTGCAAATGGCCTTGTCCAAATAAGGCCACATGTACTCAAGGAACTTGTTGATC
JMSF005K01+                                   AAATAAGGCCACATGTACTCAAGGAACTTGTTGATC
                      ____________________________________________________________
consensus             ACCATCCTGCAAATGGCCTTGTCCAAATAAGGCCACATGTACTCAAGGAACTTGTTGATC
 
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JMFF047B03+           CAGTCAACTCGATCATAGTCTGGATTTTTAACCCAAAGGGGGATTTCTGGAAGCAACTTT
JMSF005K01+           CAGTCAACTCGATCATAGTCTGGATTTTTAACCCAAAGGGGGATTTCTGGAAGCAACTTT
                      ____________________________________________________________
consensus             CAGTCAACTCGATCATAGTCTGGATTTTTAACCCAAAGGGGGATTTCTGGAAGCAACTTT
 
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JMFF047B03+           TGCAAAGCTTTAGTGTCTTGCTCAACCAGCGGGCGAATAACAGGATCCTTAACATCGCTG
JMSF011D03+                                                         CCTTAACATCGCTG
JMSF005K01+           TGCAAAGCTTTAGTGTCTTGCTCAACCAGCGGGCGAATAACAGGATCCTTAACATCGCTG
                      ____________________________________________________________
consensus             TGCAAAGCTTTAGTGTCTTGCTCAACCAGCGGGCGAATAACAGGATCCTTAACATCGCTG
 
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JMFF047B03+           GGCTGGAAATAGATGAAGGAAAAGTACCCAATCACAAGCCCAGTCGTGACCCCAACTCCA
JMSF011D03+           GGCTGGAAATAGATGAAGGAAAAGTACCCAATCACAAGCCCAGTCGTGACCCCAACTCCA
JMSF005K01+           GGCTGGAAATAGATGAAGGAAAAGTACCCAATCACAAGCCCAGTCGTGACCCCAACTCCA
                      ____________________________________________________________
consensus             GGCTGGAAATAGATGAAGGAAAAGTACCCAATCACAAGCCCAGTCGTGACCCCAACTCCA
 
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JMFF047B03+           AATCCACAAAAACCCATGATGGTGCTGAAGAAACCCATCTCTGAACCCTCGAGATTCACT
JMSF011D03+           AATCCACAAAAACCCATGATGGTGCTGAAGAAACCCATCTCTGAACCCTCGAGATTCACT
JMSF005K01+           AATCCACAAAAACCCATGATGGTGCTGAAGAAACCCATCTCTGAACCCTCGAGATTCACT
                      ____________________________________________________________
consensus             AATCCACAAAAACCCATGATGGTGCTGAAGAAACCCATCTCTGAACCCTCGAGATTCACT
 
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JMFF047B03+           TCACAGCAACCTCAGCTAAACTCACTGGCTCAACTCGTCAAAAACTCAGATCAAACTCGA
JMSF011D03+           TCACAGCAACCTCAGCTAAACTCACTGGCTCAACTCGTCAAAAACTCAGATCAAACTCGA
JMSF005K01+           TCACAGCAACCTCAGCTAAACTCACTGGCTCAACTCGTCAAAAACTCAGATCAAACTCGA
                      ____________________________________________________________
consensus             TCACAGCAACCTCAGCTAAACTCACTGGCTCAACTCGTCAAAAACTCAGATCAAACTCGA
 
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JMFF047B03+           CTAGAAGGTTCTACAGTCCACGTTCCCAGCCCTCCTCGACTCTTCCTCGTACCAGAATC 
JMSF011D03+           CTAGAAGGTTCTACAGTCCACGTTCCCAGCCCTCCTCGACTCTTCCTCGTACCAGAATC 
JMSF005K01+           CTAGAAGGTTCTACAGTCCACGTTCCCAGCCCTCCTCGACTCTTCCTCGTACCAGAATCT
                      ____________________________________________________________
consensus             CTAGAAGGTTCTACAGTCCACGTTCCCAGCCCTCCTCGACTCTTCCTCGTACCAGAATCT