| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS074B02 | Sequence | 621 | 004938 (7) | ref|XP_009762606.1| | 6e-63 | PREDICTED: uncharacterized protein LOC104214608 isoform X2 [Nicotiana sylvestri | |||||
| JMFS102C03 | Sequence | 626 | 004938 (7) | ref|XP_009762606.1| | 3e-69 | PREDICTED: uncharacterized protein LOC104214608 isoform X2 [Nicotiana sylvestri | |||||
| JMFS109A03 | Sequence | 627 | 004938 (7) | ref|XP_009762606.1| | 2e-68 | PREDICTED: uncharacterized protein LOC104214608 isoform X2 [Nicotiana sylvestri | |||||
| JMFS110H02 | Sequence | 622 | 004938 (7) | ref|XP_009762606.1| | 1e-83 | PREDICTED: uncharacterized protein LOC104214608 isoform X2 [Nicotiana sylvestri | |||||
| JMFS133B10 | Sequence | 601 | 004938 (7) | ref|XP_009762606.1| | 2e-62 | PREDICTED: uncharacterized protein LOC104214608 isoform X2 [Nicotiana sylvestri | |||||
| JMFS162H03 | Sequence | 564 | 004938 (7) | ref|XP_009762606.1| | 1e-57 | PREDICTED: uncharacterized protein LOC104214608 isoform X2 [Nicotiana sylvestri | |||||
| JMSF004H21 | Sequence | 337 | 004938 (7) | emb|CDP04227.1| | 5e-07 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS110H02+ CCTCGATGGTTCTCTTGGATATG
____________________________________________________________
consensus CCTCGATGGTTCTCTTGGATATG
. : . : . : . : . : . :
JMFS110H02+ AGTTGGTAAAGCAACGCAACAAATAGACCAATANAAAGTATCAAACTTGCTATCGAGCAA
JMFS102C03+ TCGAGCAA
JMFS109A03+ TCGAGCAA
____________________________________________________________
consensus AGTTGGTAAAGCAACGCAACAAATAGACCAATANAAAGTATCAAACTTGCTATCGAGCAA
. : . : . : . : . : . :
JMFS110H02+ GTTCCGCCCAGCTCTGTTTTGCGCTTCTTAACTACCTTCTGGTCATCAAGAAAATGGCGA
JMFS102C03+ GTTCCGCCCAGCTCTGTTNTGCGCTTCTTAACTACCTTCTGGTCATCAAGAAAATGGCGA
JMFS109A03+ GTTCCGCCCAGCTCTGTTNTGCGCTTCTTAACTACCTTCTGGTCATCAAGAAAATGGCGA
JMFS162H03+ AAAATGGCGA
JMFS133B10+ TTAACTACCTTCTGGTCATCAAGAAAATGGCGA
JMFS074B02+ GCTTCTTAACTACCTTCTGGTCATCAAGAAAATGGCGA
____________________________________________________________
consensus GTTCCGCCCAGCTCTGTTTTGCGCTTCTTAACTACCTTCTGGTCATCAAGAAAATGGCGA
. : . : . : . : . : . :
JMFS110H02+ GTGGCGAAGCAGATGTCGAGGCGGCTAATCCACCACCGGATCTGGAACCATAAGGAGCGT
JMFS102C03+ GTGGCGAAGCAGATGTCGAGGCGGCTAATCCACCACCGGATCTGGAACCATAAGGAGCGT
JMFS109A03+ GTGGCGAAGCAGATGTCGAGGCGGCTAATCCACCACCGGATCTGGAACCATAAGGAGCGT
JMFS162H03+ GTGGCGAAGCAGATGTCGAGGCGGCTAATCCACCACCGGATCTGGAACCATAAGGAGCGT
JMFS133B10+ GTGGCGAAGCAGATGTCGAGGCGGCTAATCCACCACCGGATCTGGAACCATAAGGAGCGT
JMFS074B02+ GTGGCGAAGCAGATGTCGAGGCGGCTAATCCACCACCGGATCTGGAACCATAAGGAGCGT
____________________________________________________________
consensus GTGGCGAAGCAGATGTCGAGGCGGCTAATCCACCACCGGATCTGGAACCATAAGGAGCGT
. : . : . : . : . : . :
JMFS110H02+ CCATCGCCTAGCGGAGCGAAACGAGCTAAGAAGCATACGACGAGCCAGGAGAGGACTAAA
JMFS102C03+ CCATCGCCTAGCGGAGCGAAACGAGCTAAGAAGCATACGACGAGCCAGGAGAGGACTAAA
JMFS109A03+ CCATCGCCTAGCGGAGCGAAACGAGCTAAGAAGCATACGACGAGCCAGGAGAGGACTAAA
JMFS162H03+ CCATCGCCTAGCGGAGCGAAACGAGCTAAGAAGCATACGACGAGCCAGGAGAGGACTAAA
JMFS133B10+ CCATCGCCTAGCGGAGCGAAACGAGCTAAGAAGCATACGACGAGCCAGGAGAGGACTAAA
JMFS074B02+ CCATCGCCTAGCGGAGCGAAACGAGCTAAGAAGCATACGACGAGCCAGGAGAGGACTAAA
____________________________________________________________
consensus CCATCGCCTAGCGGAGCGAAACGAGCTAAGAAGCATACGACGAGCCAGGAGAGGACTAAA
. : . : . : . : . : . :
JMFS110H02+ ACGAAGGTTGCCTGAAGGATCACAGACTGCGAATGGGTGAGCTTCTTCATGGAATCAAAG
JMFS102C03+ ACGAAGGTTGCCTGAAGGATCACAGACTGCGAATGGGTGAGCTTCTTCATGGAATCAAAG
JMFS109A03+ ACGAAGGTTGCCTGAAGGATCACAGACTGCGAATGGGTGAGCTTCTTCATGGAATCAAAG
JMFS162H03+ ACGAAGGTTGCCTGAAGGATCACAGACTGCGAATGGGTGAGCTTCTTCATGGAATCAAAG
JMFS133B10+ ACGAAGGTTGCCTGAAGGATCACAGACTGCGAATGGGTGAGCTTCTTCATGGAATCAAAG
JMFS074B02+ ACGAAGGTTGCCTGAAGGATCACAGACTGCGAATGGGTGAGCTTCTTCATGGAATCAAAG
____________________________________________________________
consensus ACGAAGGTTGCCTGAAGGATCACAGACTGCGAATGGGTGAGCTTCTTCATGGAATCAAAG
. : . : . : . : . : . :
JMFS110H02+ TCGAAGATAGTGCTACTGCCAGGGAGGGAAACGGAGTTGTAGTCCACGCCGGATTCCACC
JMFS102C03+ TCGAAGATAGTGCTACTGCCAGGGAGGGAAACGGAGTTGTAGTCCACGCCGGATTCCACC
JMFS109A03+ TCGAAGATAGTGCTACTGCCAGGGAGGGAAACGGAGTTGTAGTCCACGCCGGATTCCACC
JMFS162H03+ TCGAAGATAGTGCTACTGCCAGGGAGGGAAACGGAGTTGTAGTCCACGCCGGATTCCACC
JMFS133B10+ TCGAAGATAGTGCTACTGCCAGGGAGGGAAACGGAGTTGTAGTCCACGCCGGATTCCACC
JMFS074B02+ TCGAAGATAGTGCTACTGCCAGGGAGGGAAACGGAGTTGTAGTCCACGCCGGATTCCACC
____________________________________________________________
consensus TCGAAGATAGTGCTACTGCCAGGGAGGGAAACGGAGTTGTAGTCCACGCCGGATTCCACC
. : . : . : . : . : . :
JMFS110H02+ TCAATTGGACCCCAGTCGGCGAAGAGCGAGCAGCTCCGGCGAGCAGCGTCGAACACGTAA
JMFS102C03+ TCAATTGGACCCCAGTCGGCGAAGAGCGAGCAGCTCCGGCGAGCAGCGTCGAACACGTAA
JMFS109A03+ TCAATTGGACCCCAGTCGGCGAAGAGCGAGCAGCTCCGGCGAGCAGCGTCGAACACGTAA
JMFS162H03+ TCAATTGGACCCCAGTCGGCGAAGAGCGAGCAGCTCCGGCGAGCAGCGTCGAACACGTAA
JMFS133B10+ TCAATTGGACCCCAGTCGGCGAAGAGCGAGCAGCTCCGGCGAGCAGCGTCGAACACGTAA
JMFS074B02+ TCAATTGGACCCCAGTCGGCGAAGAGCGAGCAGCTCCGGCGAGCAGCGTCGAACACGTAA
JMSF004H21+ GAGCGAGCAGNTCCGGCGAGCAGCGTCGAACACGTAA
____________________________________________________________
consensus TCAATTGGACCCCAGTCGGCGAAGAGCGAGCAGCTCCGGCGAGCAGCGTCGAACACGTAA
. : . : . : . : . : . :
JMFS110H02+ CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
JMFS102C03+ CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
JMFS109A03+ CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
JMFS162H03+ CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
JMFS133B10+ CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
JMFS074B02+ CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
JMSF004H21+ CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
____________________________________________________________
consensus CCAGGGTTGCAGGCGCACAAGGTTCCATTGTACCGAAAAGAGTTGCTCGGACACTGCATT
. : . : . : . : . : . :
JMFS110H02+ TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
JMFS102C03+ TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
JMFS109A03+ TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
JMFS162H03+ TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
JMFS133B10+ TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
JMFS074B02+ TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
JMSF004H21+ TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
____________________________________________________________
consensus TTCTCCTCCTTGGACTACTTCGCCTCCTCGGCGCGGCTGCCGGACAATGATATCGGCGGC
. : . : . : . : . : . :
JMFS110H02+ ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAA
JMFS102C03+ ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAAG
JMFS109A03+ ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAAG
JMFS162H03+ ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAAG
JMFS133B10+ ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAAG
JMFS074B02+ ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAAG
JMSF004H21+ ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAAG
____________________________________________________________
consensus ACGGCAGATTAGTGGCGAAGTAAAGAACACATGGAGAGAAAAGCTTAGAAGCAAAGAAAG
. : . : . : . : . : . :
JMFS102C03+ AAAACGTGAAAGGATCGATTTAGAGCTTCTTTTCTTTGTTTCTTTTACCAGAATCGGAAT
JMFS109A03+ AAAACGTGAAAGGATCGATTTAGAGCTTCTTTTCTTTGTTTCTTTTACCAGAATCGGAAT
JMFS162H03+ AAAACGTGAAAGGATCGATTTAGAGCTTCTTTTCTTTGTTTCTTTTACCAGAATCGGAAT
JMFS133B10+ AAAACGTGAAAGGATCGATTTAGAGCTTCTTTTCTTTGTTTCTTTTACCAGAATCGGAAT
JMFS074B02+ AAAACGTGAAAGGATCGATTTAGAGCTTCTTTTCTTTGTTTCTTTTACCAGAATCGGAAT
JMSF004H21+ AAAACGTGAAAGGATCGATTTAGAGCTTCTTTTCTTTGTTTCTTTTACCAGAATCGGAAT
____________________________________________________________
consensus AAAACGTGAAAGGATCGATTTAGAGCTTCTTTTCTTTGTTTCTTTTACCAGAATCGGAAT
. : . : . : . : . : . :
JMFS102C03+ TTAGATAAGCTAAA
JMFS109A03+ TTAGATAAGCTAAACATGT
JMFS162H03+ TTAGATAAGCTAAA
JMFS133B10+ TTAGATAAGCTAAACATGTACAGCCTGA
JMFS074B02+ TTAGATAAGCTAAACATGTACAGCCTGACAATGGCGGTTTCTT
JMSF004H21+ TTAGATAAGCTAAACATGTACAGCCTGACAATGGCGGTTTCTTGCCACGGTGGTAAGATC
____________________________________________________________
consensus TTAGATAAGCTAAACATGTACAGCCTGACAATGGCGGTTTCTTGCCACGGTGGTAAGATC