Contig 004933:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004A01Sequence275004933 (2)
JMSF051B20Sequence663004933 (2)ref|XP_009613585.1|130PREDICTED: uncharacterized protein LOC104106690 [Nicotiana tomentosiformis] ref|717018357ref|XP_010109884.1|2e-04hypothetical protein L484_003815 [Morus notabilis] gb|EXC24837.1| hypothetical p

Alignment

This contig is upended


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JMSF051B20+                                                                     CG
                      ____________________________________________________________
consensus                                                                       CG
 
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JMSF051B20+           AGTACATCAGGATTAGTGCATTCCCTCGAGTCCCGTCCTTCCACATCAAATTCCCCTTTC
                      ____________________________________________________________
consensus             AGTACATCAGGATTAGTGCATTCCCTCGAGTCCCGTCCTTCCACATCAAATTCCCCTTTC
 
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JMSF051B20+           CCGAGCATACTCTCCACCAAGCTATCCATTAAGGCAGCGTGGTTTTTCAGTGCAAGGGGT
                      ____________________________________________________________
consensus             CCGAGCATACTCTCCACCAAGCTATCCATTAAGGCAGCGTGGTTTTTCAGTGCAAGGGGT
 
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JMSF051B20+           TCGGTTTGGAACCTGAAACTATCCTCGTGGCAAGGCCTCTCACAGGAATAAAATCGCCTA
                      ____________________________________________________________
consensus             TCGGTTTGGAACCTGAAACTATCCTCGTGGCAAGGCCTCTCACAGGAATAAAATCGCCTA
 
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JMSF051B20+           GAATCTGGCTTCCTTCCCGGAGGGAGTCTTGGCATAGTTGAAGGATCCTCACACGGGTAG
                      ____________________________________________________________
consensus             GAATCTGGCTTCCTTCCCGGAGGGAGTCTTGGCATAGTTGAAGGATCCTCACACGGGTAG
 
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JMSF051B20+           ACTTTGCCTCCATTTTCTCCTCTCCGCTTCCCAGGAGCTTGTTCCCAACAAAACGGAACC
                      ____________________________________________________________
consensus             ACTTTGCCTCCATTTTCTCCTCTCCGCTTCCCAGGAGCTTGTTCCCAACAAAACGGAACC
 
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JMSF051B20+           GCAACTGGTTTCGTAACTTCACTCAACTCACAATCGGATTTCGGGACACACAGAGGTTGT
                      ____________________________________________________________
consensus             GCAACTGGTTTCGTAACTTCACTCAACTCACAATCGGATTTCGGGACACACAGAGGTTGT
 
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JMSF051B20+           CGTTGTTGTTGTCTATTAGGCTGTGGATTCTCGACATTCTTCCTATTTACACCCTCCAAG
                      ____________________________________________________________
consensus             CGTTGTTGTTGTCTATTAGGCTGTGGATTCTCGACATTCTTCCTATTTACACCCTCCAAG
 
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JMSF051B20+           TGACGAACATTGGAATTGATTCTCCTCACTGATATAATTGGCACACTAAGATTAAGCTTT
JMSF004A01+                                    TCACTGATATAATTGGCACACTAAGANTAAGCTTT
                      ____________________________________________________________
consensus             TGACGAACATTGGAATTGATTCTCCTCACTGATATAATTGGCACACTAAGATTAAGCTTT
 
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JMSF051B20+           GTTTTCTCCATTACAACACACTCTTTCTATGGCAATGCCCTCCCCTAAGATTCAACCCTG
JMSF004A01+           GTTTTCTCCATTACAACACACTCTTTCTATGGCAATGCCCTCCCCTAAGATTCAACCCTG
                      ____________________________________________________________
consensus             GTTTTCTCCATTACAACACACTCTTTCTATGGCAATGCCCTCCCCTAAGATTCAACCCTG
 
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JMSF051B20+           GCAACTCAAAATAGCACACACTTTTTGTCTTGTTGGATCATGGACCACTTA         
JMSF004A01+           GCAACTCAAAATAGCACACACTTTTTGTCTTGTTGGATCATGGACCACTTACTGTGAGAG
                      ____________________________________________________________
consensus             GCAACTCAAAATAGCACACACTTTTTGTCTTGTTGGATCATGGACCACTTACTGTGAGAG
 
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JMSF004A01+           GGGAGAGTGAGAGTGTGGGACTTTGGGTGCGCGAGTGTTGGCTTGATTGAATCCGAGATA
                      ____________________________________________________________
consensus             GGGAGAGTGAGAGTGTGGGACTTTGGGTGCGCGAGTGTTGGCTTGATTGAATCCGAGATA
 
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JMSF004A01+           GAAGGGGAAAAAGTTGGTAAATTGGAGAGAGAGAGAGAGAGAGAGCAAGGAAAAGTGTTC
                      ____________________________________________________________
consensus             GAAGGGGAAAAAGTTGGTAAATTGGAGAGAGAGAGAGAGAGAGAGCAAGGAAAAGTGTTC