Contig 004929:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001J17Sequence366004929 (3)emb|CDP14487.1|8e-10unnamed protein product [Coffea canephora]760011424 (4)gb|ADM88045.1|7e-93CDPK11 [Nicotiana tabacum]
JMSF003I10Sequence418004929 (3)emb|CDP14487.1|2e-09unnamed protein product [Coffea canephora]749011424 (4)ref|XP_010911424.1|1e-80PREDICTED: calcium-dependent protein kinase 4 [Elaeis guineensis]
JMSF048F19Sequence644004929 (3)ref|XP_010645740.1|5e-40PREDICTED: calcium-dependent protein kinase 26 isoform X1 [Vitis vinifera]774011424 (4)gb|ADM88045.1|4e-78CDPK11 [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048F19+ ATAGACTTACAAGCATAGTCAACACCAGTGGAAATCTCAGTGCA
                      ____________________________________________________________
consensus ATAGACTTACAAGCATAGTCAACACCAGTGGAAATCTCAGTGCA
 
. : . : . : . : . : . :
JMSF048F19+ GAGATAAGTGGTGCCAAATTGACCTTGACCCAACTTACGGCCCAGTGTGTAAAGATCACG
                      ____________________________________________________________
consensus GAGATAAGTGGTGCCAAATTGACCTTGACCCAACTTACGGCCCAGTGTGTAAAGATCACG
 
. : . : . : . : . : . :
JMSF048F19+ GATGTTAGCGGTCTTGTGACCTAGGACGTGATAGGCCTGGTTATTGGTGGAACGATACAT
                      ____________________________________________________________
consensus GATGTTAGCGGTCTTGTGACCTAGGACGTGATAGGCCTGGTTATTGGTGGAACGATACAT
 
. : . : . : . : . : . :
JMSF048F19+ GTTTTCCTTTTTGGGATAAAGTATAGGGATGCGTTGGTCGTCTTTGTTGGGGTTGGGGTT
                      ____________________________________________________________
consensus GTTTTCCTTTTTGGGATAAAGTATAGGGATGCGTTGGTCGTCTTTGTTGGGGTTGGGGTT
 
. : . : . : . : . : . :
JMSF001J17+ GGTTGGGGTGGGTATCCTTGGGGCTCAGCCTAGTAGGGGAGGAGAAATTATCAGAGTA
JMSF048F19+ GGGGTTGGGGTGGGTATCCTTGGGGCTCAGCCTAGTAGGGGAGGAGAAATTATCAGAGTA
JMSF003I10+ GGTTGGGGTGGGTATCCTTGGGGCTCAGCCTAGTAGGGGAGGAGAAATTATCAGAGTA
                      ____________________________________________________________
consensus GGGGTTGGGGTGGGTATCCTTGGGGCTCAGCCTAGTAGGGGAGGAGAAATTATCAGAGTA
 
. : . : . : . : . : . :
JMSF001J17+ AGAGTTAGAACGGGCGGAAGAAGGGTTACAGTTAGAAATGGAATGATCTTCGGGCTGTGT
JMSF048F19+ AGAGTTAGAACGGGCGGAAGAAGGGTTACAGTTAGAAATGGAATGATCTTCGGGCTGTGT
JMSF003I10+ AGAGTTAGAACGGGCGGAAGAAGGGTTACAGTTAGAAATGGAATGATCTTCGGGCTGTGT
                      ____________________________________________________________
consensus AGAGTTAGAACGGGCGGAAGAAGGGTTACAGTTAGAAATGGAATGATCTTCGGGCTGTGT
 
. : . : . : . : . : . :
JMSF001J17+ GTAGCCCTGAAAATGCTTGCTTCCGAAAGATCCACGGCATGTGTTGCCCATGAAACAATC
JMSF048F19+ GTAGCCCTGAAAATGCTTGCTTCCGAAAGATCCACGGCATGTGTTGCCCATGAAACAATC
JMSF003I10+ GTAGCCCTGAAAATGCTTGCTTCCGAAAGATCCACGGCATGTGTTGCCCATGAAACAATC
                      ____________________________________________________________
consensus GTAGCCCTGAAAATGCTTGCTTCCGAAAGATCCACGGCATGTGTTGCCCATGAAACAATC
 
. : . : . : . : . : . :
JMSF001J17+ ACAAGTCCCCCTCTCAGCTCAGCAACTTCACAACTGGCAATTCTTTCGTCATCCAAGGTT
JMSF048F19+ ACAAGTCCCCCTCTCAGCTCAGCAACTTCACAACTGGCAATTCTTTCGTCATCCAAGGTT
JMSF003I10+ ACAAGTCCCCCTCTCAGCTCAGCAACTTCACAACTGGCAATTCTTTCGTCATCCAAGGTT
                      ____________________________________________________________
consensus ACAAGTCCCCCTCTCAGCTCAGCAACTTCACAACTGGCAATTCTTTCGTCATCCAAGGTT
 
. : . : . : . : . : . :
JMSF001J17+ TTGTATGAGAAGAATGAATAATTAAGCGGGGGGGATGGAAGGATCAAATCTCTGAGCATA
JMSF048F19+ TTGTATGAGAAGAATGAATAATTAAGCGGGGGGGATGGAAGGATCAAATCTCTGAGCATA
JMSF003I10+ TTGTATGAGAAGAATGAATAATTAAGCGGGGGGGATGGAAGGATCAAATCTCTGAGCATA
                      ____________________________________________________________
consensus TTGTATGAGAAGAATGAATAATTAAGCGGGGGGGATGGAAGGATCAAATCTCTGAGCATA
 
. : . : . : . : . : . :
JMSF001J17+ GAGTTCTGTTATGTGATGATCGCGCTGGAGACTGACGACGGCGAGACGGCGAGACGACGA
JMSF048F19+ GAGTTCTGTTATGTGATGATCGCGCTGGAGACTGACGACGGCGAGACGGCGAGACGACGA
JMSF003I10+ GAGTTCTGTTATGTGATGATCGCGCTGGAGACTGACGACGGCGAGACGGCGAGACGACGA
                      ____________________________________________________________
consensus GAGTTCTGTTATGTGATGATCGCGCTGGAGACTGACGACGGCGAGACGGCGAGACGACGA
 
. : . : . : . : . : . :
JMSF001J17+ CAAG
JMSF048F19+ CAAGCATGGCGAGGAGGAGGAGAGTAAATGGATGATATTTCAAAATTTCACAATTAATTC
JMSF003I10+ CAAGCATGGCGAGGAGGAGGAGAGTAAATGGATGATATTTCAAAATTTCACAATTAATTC
                      ____________________________________________________________
consensus CAAGCATGGCGAGGAGGAGGAGAGTAAATGGATGATATTTCAAAATTTCACAATTAATTC