Contig 004927:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015O22Sequence498004927 (2)ref|XP_004230570.1|8e-35PREDICTED: GATA transcription factor 24 [Solanum lycopersicum]733003987 (2)ref|XP_009609389.1|4e-56PREDICTED: GATA transcription factor 28-like [Nicotiana tomentosiformis]
JMSF003E23Sequence376004927 (2)ref|XP_004230570.1|4e-14PREDICTED: GATA transcription factor 24 [Solanum lycopersicum]828017059ref|XP_009609389.1|3e-40PREDICTED: GATA transcription factor 28-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF015O22+ GATATTCACCCACACCCCC
                      ____________________________________________________________
consensus GATATTCACCCACACCCCC
 
. : . : . : . : . : . :
JMFF015O22+ TTTGACTTTGGGATGGCACTCCAACAGTGGGAATAGCAGAGGGCACTTCATATCCACCCA
                      ____________________________________________________________
consensus TTTGACTTTGGGATGGCACTCCAACAGTGGGAATAGCAGAGGGCACTTCATATCCACCCA
 
. : . : . : . : . : . :
JMFF015O22+ ACAGCAACAGCACTGCCTGAACCTTTTCAGGTGAAACGGCATCGAATACATAGACTTCAC
JMSF003E23+ AATACATAGACTTCAC
                      ____________________________________________________________
consensus ACAGCAACAGCACTGCCTGAACCTTTTCAGGTGAAACGGCATCGAATACATAGACTTCAC
 
. : . : . : . : . : . :
JMFF015O22+ CCTGAAACGACAGGGTAAGCTGATCAGCCCCACCCCCGGCAGTAGGATGAACAACAATCT
JMSF003E23+ CCTGAAACGACAGGGTAAGCTGATCAGCCCCACCCCCGGCAGTAGGATGAACAACAATCT
                      ____________________________________________________________
consensus CCTGAAACGACAGGGTAAGCTGATCAGCCCCACCCCCGGCAGTAGGATGAACAACAATCT
 
. : . : . : . : . : . :
JMFF015O22+ CCGACCCTCCGGGAGCATAGAGAGCGCGAGGGGAAACGCTGTCCACGCCATTCATCGGCG
JMSF003E23+ CCGACCCTCCGGGAGCATAGAGAGCGCGAGGGGAAACGCTGTCCACGCCATTCATCGGCG
                      ____________________________________________________________
consensus CCGACCCTCCGGGAGCATAGAGAGCGCGAGGGGAAACGCTGTCCACGCCATTCATCGGCG
 
. : . : . : . : . : . :
JMFF015O22+ CTGCAGCGTCCATGGAGCCGTTGTGAAGAGCCTGGGAGTGAGAGTGTGGTTCGAATTGGA
JMSF003E23+ CTGCAGCGTCCATGGAGCCGTTGTGAAGAGCCTGGGAGTGAGAGTGTGGTTCGAATTGGA
                      ____________________________________________________________
consensus CTGCAGCGTCCATGGAGCCGTTGTGAAGAGCCTGGGAGTGAGAGTGTGGTTCGAATTGGA
 
. : . : . : . : . : . :
JMFF015O22+ CGTGAGGAGAAGCCTCATCAATCGAGTCCTCGCCGCCACACCCATCGGCGCCGGAGTCGT
JMSF003E23+ CGTGAGGAGAAGCCTCATCAATCGAGTCCTCGCCGCCACACCCATCGGCGCCGGAGTCGT
                      ____________________________________________________________
consensus CGTGAGGAGAAGCCTCATCAATCGAGTCCTCGCCGCCACACCCATCGGCGCCGGAGTCGT
 
. : . : . : . : . : . :
JMFF015O22+ CGTTGTCTTCCTCCTCGTCGGCGATCTGAGGGTGGTGCTGCTCCGCGTCTTGGTGTAGTA
JMSF003E23+ CGTTGTCTTCCTCCTCGTCGGCGATCTGAGGGTGGTGCTGCTCCGCGTCTTGGTGTAGTA
                      ____________________________________________________________
consensus CGTTGTCTTCCTCCTCGTCGGCGATCTGAGGGTGGTGCTGCTCCGCGTCTTGGTGTAGTA
 
. : . : . : . : . : . :
JMFF015O22+ CAGCGGTGCTAAGCGGTGTCCCCATTCCATACATCGTCGCTCTATGATTCGTCTCTGCC
JMSF003E23+ CAGCGGTGCTAAGCGGTGTCCCCATTCCATACATCGTCGCTCTATGATTCGTCTCTGCCC
                      ____________________________________________________________
consensus CAGCGGTGCTAAGCGGTGTCCCCATTCCATACATCGTCGCTCTATGATTCGTCTCTGCCC