| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF041O20 | Sequence | 605 | 004924 (6) | ref|XP_004239304.1| | 4e-72 | PREDICTED: bidirectional sugar transporter N3 [Solanum lycopersicum] | 620 | 004924 (6) | ref|XP_007222479.1| | 6e-19 | hypothetical protein PRUPE_ppa009789mg [Prunus persica] gb|EMJ23678.1| hypotheti |
| JMFN015F03 | Sequence | 606 | 004924 (6) | ref|XP_006359079.1| | 2e-35 | PREDICTED: bidirectional sugar transporter N3-like [Solanum tuberosum] | |||||
| JMFS156B01 | Sequence | 604 | 004924 (6) | ref|XP_004239304.1| | 9e-76 | PREDICTED: bidirectional sugar transporter N3 [Solanum lycopersicum] | |||||
| JMSF003C01 | Sequence | 353 | 004924 (6) | ref|XP_006368075.1| | 2e-31 | PREDICTED: bidirectional sugar transporter SWEET12-like [Solanum tuberosum] | 768 | 004924 (6) | ref|XP_006359079.1| | 2e-51 | PREDICTED: bidirectional sugar transporter N3-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF041O20- ATACAAACAAAATTAATAGCTTATTATTACGTAATTTAATTCTC
rJMSF003C01- ATTCTC
____________________________________________________________
consensus ATACAAACAAAATTAATAGCTTATTATTACGTAATTTAATTCTC
. : . : . : . : . : . :
rJMFF041O20- GCTTAATTATTTTTTCACCGAATTACAATTCTTTCCCACCTTAATTCCCTTATCCCAACC
JMFN015F03+ ATCCCAACC
rJMSF003C01- GCTTAATTATTTTTTCACCGAATTACAATTCTTTCCCACCTTAATTCCCTTATCCCAACC
____________________________________________________________
consensus GCTTAATTATTTTTTCACCGAATTACAATTCTTTCCCACCTTAATTCCCTTATCCCAACC
. : . : . : . : . : . :
rJMFF041O20- AAACGCCATGTAAAGGAAAGATAAAGAATATAATAATAATAATATAATTAAGCAGCACAG
JMFN015F03+ AACGGCCATGTAAAGGAAAGATAAAGAATATAATAATAATAATATAATTAAGCAGCACAG
rJMSF003C01- AAACGCCATGTAAAGGAAAGATAAAGAATATAATAATAATAATATAATTAAGCAGCACAG
____________________________________________________________
consensus AAACGCCATGTAAAGGAAAGATAAAGAATATAATAATAATAATATAATTAAGCAGCACAG
. : . : . : . : . : . :
rJMFF041O20- AGGACGACGGCCGCCGACGGCGGCTCAATTTGCGCATTCACAGGGTGGGTGAATTGGAGG
JMFN015F03+ AGGACGACGGCCGCCGACGGCGGCTCAATTTGCGCATTCACAGGGTGGGTGAATTGGAGG
rJMSF003C01- AGGACGACGGCCGCCGACGGCGGCTCAATTTGCGCATTCACAGGGTGGGTGAATTGGAGG
____________________________________________________________
consensus AGGACGACGGCCGCCGACGGCGGCTCAATTTGCGCATTCACAGGGTGGGTGAATTGGAGG
. : . : . : . : . : . :
rJMFF041O20- ACATTATCGTCAAGATTAGGATTTGCCGGCGGCAGAGGCTGTGGCGCCGTAATCATCATG
JMFN015F03+ ACATTATCGTCAAGATTAGGATTTGCCGGCGGCAGAGGCTGTGGCGCTGTAATCATCATG
rJMSF003C01- ACATTATCGTCAAGATTAGGATTTGCCGGCGGCAGAGGCTGTGGCGCCGTAATCATCATG
____________________________________________________________
consensus ACATTATCGTCAAGATTAGGATTTGCCGGCGGCAGAGGCTGTGGCGCCGTAATCATCATG
. : . : . : . : . : . :
rJMFF041O20- GTTTTCCCGGCGCGGTTTTCTTCTTCTTTTTCCTCTTCTTTGCTCTTTTGATCTGGCTTT
JMFN015F03+ GTTTTCCCGGCGCGGTTTTCTTCTTCTTTTTCCTCTTCTTTGCTCTTTTGATCTGGCTTT
rJMSF003C01- GTTTTCCCGGCGCGGTTTTCTTCTTCTTTTTCCTCTTCTTTGCTCTTTTGATCTGGCTTT
____________________________________________________________
consensus GTTTTCCCGGCGCGGTTTTCTTCTTCTTTTTCCTCTTCTTTGCTCTTTTGATCTGGCTTT
. : . : . : . : . : . :
rJMFF041O20- TCTGCTTTTTCTTCAGTAACGGCGTCACTGACGGTGATGGCTGTCGTCTTAGAATCCTCC
JMFN015F03+ TCTGCTTTTTCTTCAGTAACGGCGTCACTGACGGTGATGGCTGTCGTCTTAGAATCCTCC
rJMSF003C01- TCTGCTTTTTCTTCAGTAACGGCGTCACTGACGGTGATGGCTGTCGTCTTAGAATCCTCC
____________________________________________________________
consensus TCTGCTTTTTCTTCAGTAACGGCGTCACTGACGGTGATGGCTGTCGTCTTAGAATCCTCC
. : . : . : . : . : . :
rJMFF041O20- ACAGATGAGTGCAATAATTCCCCTAGCCCTGCCACGTTTATAACGAGCTCTGGCACGGCG
JMFN015F03+ ACAGATGAGTGCAATAATTCCCCTAGCCCTGCCACGTTTATAACGAGCTCTGGCACGGCG
rJMSF003C01- ACAGATGAGTGCAATAATTCCCCTAGCCCTGCCACGTTTATAACGAGCTCTGGCACGGCG
____________________________________________________________
consensus ACAGATGAGTGCAATAATTCCCCTAGCCCTGCCACGTTTATAACGAGCTCTGGCACGGCG
. : . : . : . : . : . :
rJMFF041O20- CCCTTTTTCTCCTCCGCCACTTCAAGTGGCTTCTGGTTTCTGTAGATTCCGTATAACACC
JMFN015F03+ CCCTTTTTCTCCTCCGCCACTTCAAGTGGCTTCTGGTTTCTGTAGATTCCGTATAGCACC
rJMSF003C01- CCCTTTTTCTCCTCCGCCACTTCAAGTGGCTTCTGGTTTCTGTAGATTCCGTATAACACC
____________________________________________________________
consensus CCCTTTTTCTCCTCCGCCACTTCAAGTGGCTTCTGGTTTCTGTAGATTCCGTATAACACC
. : . : . : . : . : . :
rJMFF041O20- ATTTGTACGATTCCCAATAAAAACCCCAAAACGTTTGGTAAAGCAATGCACATGTCCTTC
JMFN015F03+ ATTTGTACGATTCCCAATAAAAACCCCAAAACGTTTGGTAAAGCAATGCACATGTCCTTC
rJMSF003C01- ATTTGTACGATTCCCAATAAAAACCCCAAAACGTTTGGTAAAGCAATGCACATGTCCTTC
____________________________________________________________
consensus ATTTGTACGATTCCCAATAAAAACCCCAAAACGTTTGGTAAAGCAATGCACATGTCCTTC
. : . : . : . : . : . :
rJMFF041O20- AACAACAAGCCATAGCCTAACCACATAACTGCAGTC
JMFN015F03+ AACAACAAGCCATAGCCTAACCACATAACTGCAGTCAACGTAAGGAAGAAAGACAGGTTG
rJMSF003C01- AACAACAAGCCATAGCCTAACCACATAACTGCAGTCAACGTAAGGAAGAAAGACAGGTTG
____________________________________________________________
consensus AACAACAAGCCATAGCCTAACCACATAACTGCAGTCAACGTAAGGAAGAAAGACAGGTTG
. : . : . : . : . : . :
JMFN015F03+ AACGGCATGAACTCTACGCTCTTTGTCTTCACCACTTTGAACACAATGCTAAGAGGC
rJMSF003C01- AACGGCATGAACTCTACGCTCTTTGTCTTCACCACTTTGAACACAATGCTAAGAGGCGCA
JMFS156B01+ TCACCACTTTGAACACAATGCTAAGAGGCGCA
JMFF041O20+ GAGGCGCA
____________________________________________________________
consensus AACGGCATGAACTCTACGCTCTTTGTCTTCACCACTTTGAACACAATGCTAAGAGGCGCA
. : . : . : . : . : . :
rJMSF003C01- GCGAAAACGCAGACGGAAAAAGCCACACAAATCCATCCCACAATGTTGACACGAAGGGTG
JMFS156B01+ GCGAAAACGCAGACGGAAAAAGCCACACAAATCCATCCCACAATGTTGACACGAAGGGTG
JMFF041O20+ GCGAAAACGCAGACGGAAAAAGCCACACAAATCCATCCCACAATGTTGACACGAAGGGTG
____________________________________________________________
consensus GCGAAAACGCAGACGGAAAAAGCCACACAAATCCATCCCACAATGTTGACACGAAGGGTG
. : . : . : . : . : . :
rJMSF003C01- CCCTTAAAAGGGAACATTGTGGCCAACACAATCACAGAGTAG
JMFS156B01+ CCCTTAAAAGGGAACATTGTGGCCAACACAATCACAGAGTAGAGCCCTCCAAAAAGTAAC
JMFF041O20+ CCCTTAAAAGGGAACATTGTGGCCAACACAATCACAGAGTAGAGCCCTCCAACAAGTAAC
____________________________________________________________
consensus CCCTTAAAAGGGAACATTGTGGCCAACACAATCACAGAGTAGAGCCCTCCAACAAGTAAC
. : . : . : . : . : . :
JMFS156B01+ AACAACATCTTCATGGTTTGACGTCTAGCGATTTTGGAAGCATAACCAAGGAAAATGGAG
JMFF041O20+ AACAACATCTTCATGGTTTGACGTCTAGCGATTTTGGAAGCATAACCAAGGAAAATGGAG
____________________________________________________________
consensus AACAACATCTTCATGGTTTGACGTCTAGCGATTTTGGAAGCATAACCAAGGAAAATGGAG
. : . : . : . : . : . :
JMFS156B01+ ATGTAAAGTGTTTCGATGACACATCCGATGGAGTTGATGGAGATGAGAAGAGGAGCACTC
JMFF041O20+ ATGTAAAGTGTTTCGATGACACATCCGATGGAGTTGATGGAGATGAGAAGAGGAGCACTC
____________________________________________________________
consensus ATGTAAAGTGTTTCGATGACACATCCGATGGAGTTGATGGAGATGAGAAGAGGAGCACTC
. : . : . : . : . : . :
JMFS156B01+ TTCTTGAGGAAAGCATAGTACATCCACAACATAGCAGAAAATAAGGATACAACATAGGGA
JMFF041O20+ TTCTTGAGGAAAGCATAGTACATCCACAACATAGCAGAAAATAAGGATACAACATAGGGA
JMSF003C01+ GGAAAGCATAGTACATCCACAACATAGCAGAAAATAAGGATACAACATAGGGA
____________________________________________________________
consensus TTCTTGAGGAAAGCATAGTACATCCACAACATAGCAGAAAATAAGGATACAACATAGGGA
. : . : . : . : . : . :
JMFS156B01+ ACGGATTGATAACCCAAGCTTGATTTTGCTTTATAGATTCTTATAAATGTCGGCACTGGG
JMFF041O20+ ACGGATTGATAACCCAAGGTTGATTTTGCTTTATAGATTCTTATAAATGTCGGCACTGGG
JMSF003C01+ ACGGATTGATAACCCAAGGTTGATTTTGCTTTATAGATTCTTATAAATGTCGGCACTGGG
____________________________________________________________
consensus ACGGATTGATAACCCAAGGTTGATTTTGCTTTATAGATTCTTATAAATGTCGGCACTGGG
. : . : . : . : . : . :
JMFS156B01+ GCTAAGAATACAAGAAGTGATACAATGTTACCAAGGACTCCAAACACAAAGACCCATGGG
JMFF041O20+ GCTAAGAATACAAGAAGTGATACAATGTTACCAAGGACTCCAAACACAAAGACCCATGGG
JMSF003C01+ GCTAAGAATACAAGAAGTGATACAATGTTACCAAGGACTCCAAACACAAAGACCCATGGG
____________________________________________________________
consensus GCTAAGAATACAAGAAGTGATACAATGTTACCAAGGACTCCAAACACAAAGACCCATGGG
. : . : . : . : . : . :
JMFS156B01+ TGATGAAGATCAAACAATGCCATCTCTTTGAATGGGTATGTAGGAAAAGTACTCAAACCT
JMFF041O20+ TGATGAAGATCAAACAATGCCATCTCTTTGAATGGGTATGTAGGAAAAGTACTCAAACCT
JMSF003C01+ TGATGAAGATCAAACAATGCCATCTCTTTGAATGGGTATGTAGGAAAAGTACTCAAACCT
____________________________________________________________
consensus TGATGAAGATCAAACAATGCCATCTCTTTGAATGGGTATGTAGGAAAAGTACTCAAACCT
. : . : . : . : . : . :
JMFS156B01+ CAACTCCCTTAGCTTCTTCAACAGATCGAGATAGTTAAAGATTAATTGGTAGCAGAGTTC
JMFF041O20+ CAACTCCCTTAGCTTCTTCAACAGATCGAGATAGTTAAAGATTAATTGGTAGCAGAGTTC
JMSF003C01+ CAACTCCCTTAGCTTCTTCAACAGATCGAGATAGTTAAAGATTAATTGGTAGCAGAGTTC
____________________________________________________________
consensus CAACTCCCTTAGCTTCTTCAACAGATCGAGATAGTTAAAGATTAATTGGTAGCAGAGTTC
. : . : . : . : . : . :
JMFS156B01+ TTGATTGAGATCAGAAACTTTGTTTCTCTCTC
JMFF041O20+ TTGATTGAGATCAGAAACTTTGTTTCTCTCTCTCTTTCTATCTCTCTCTACAATATC
JMSF003C01+ TTGATTGAGATCAGAAACTTTGTTTCTCTCTCTCTTTCTATCTCTCTCTACAATATCGTC
____________________________________________________________
consensus TTGATTGAGATCAGAAACTTTGTTTCTCTCTCTCTTTCTATCTCTCTCTACAATATCGTC