Contig 004922:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002O10Sequence252004922 (2)720011296 (2)emb|CDP11003.1|8e-21unnamed protein product [Coffea canephora]
JMSF016O07Sequence370004922 (2)834011296 (2)gb|KDO85321.1|5e-34hypothetical protein CISIN_1g013739mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF016O07+ AACAAGACAATCCACCCCAACATCCAACCCATCTTTTATGCCCGGAGGTACG
                      ____________________________________________________________
consensus AACAAGACAATCCACCCCAACATCCAACCCATCTTTTATGCCCGGAGGTACG
 
. : . : . : . : . : . :
JMSF016O07+ AGGCGGCGGCGGCGGCGGCGGCTGTAGCGGCTGCGGTTGCTGGGGAGGAGGAAATCTATG
                      ____________________________________________________________
consensus AGGCGGCGGCGGCGGCGGCGGCTGTAGCGGCTGCGGTTGCTGGGGAGGAGGAAATCTATG
 
. : . : . : . : . : . :
JMSF016O07+ CTGCTCCGAACCCATTTTCTACATCTAAACTGGGCGCAACACTTCCATCCACTCACATAA
JMSF002O10+ CCACTCACATAA
                      ____________________________________________________________
consensus CTGCTCCGAACCCATTTTCTACATCTAAACTGGGCGCAACACTTCCATCCACTCACATAA
 
. : . : . : . : . : . :
JMSF016O07+ ACACAGCTTATATGCAACTTAGCTTAGCTCTCTGGCTGTTCTTGCCTTCCAGCACACACA
JMSF002O10+ ACACAGCTTATATGCAACTTAGCTTAGCTCTCTGGCTGTTCTTGCCTTCCAGCACACACA
                      ____________________________________________________________
consensus ACACAGCTTATATGCAACTTAGCTTAGCTCTCTGGCTGTTCTTGCCTTCCAGCACACACA
 
. : . : . : . : . : . :
JMSF016O07+ AACACGCACTATACTGTGTTTACCAGATGTTGACACTCCATAGATTTGGTCACACTTGCA
JMSF002O10+ AACACGCACTATACTGTGTTTACCAGATGTTGACACTCCATAGATTTGGTCACACTTGCA
                      ____________________________________________________________
consensus AACACGCACTATACTGTGTTTACCAGATGTTGACACTCCATAGATTTGGTCACACTTGCA
 
. : . : . : . : . : . :
JMSF016O07+ CAGAATCAAACATGGAGCATAATTATTGGTTTGTTTATAATCATAGATATGAACGGCTCT
JMSF002O10+ CAGAATCAAACATGGAGCATAATTATTGGTTTGTTTATAATCATAGATATGAACGGCTCT
                      ____________________________________________________________
consensus CAGAATCAAACATGGAGCATAATTATTGGTTTGTTTATAATCATAGATATGAACGGCTCT
 
. : . : . : . : . : . :
JMSF016O07+ TGTATTCTGCCAAAAA
JMSF002O10+ TGTATTCTGCCAAAAAGAAAGAGAAAGAGTGGAGAAAAAGGGCTTTTATCGAAGACCATC
                      ____________________________________________________________
consensus TGTATTCTGCCAAAAAGAAAGAGAAAGAGTGGAGAAAAAGGGCTTTTATCGAAGACCATC