Contig 004921:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010J05Sequence414004921 (3)771013645 (3)ref|XP_009618811.1|2e-37PREDICTED: uncharacterized protein LOC104110944 isoform X1 [Nicotiana tomentosi
JMSF002O01Sequence311004921 (3)731013645 (3)ref|XP_009790117.1|165PREDICTED: uncharacterized protein LOC104237636, partial [Nicotiana sylvestris]
JMSF022I16Sequence589004921 (3)ref|XP_004234118.1|5e-12PREDICTED: uncharacterized protein LOC101259611 isoform X2 [Solanum lycopersicu770013645 (3)ref|XP_009618813.1|2e-60PREDICTED: uncharacterized protein LOC104110944 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF022I16+                                              NNTTNNNNNNGGGGAAAGNNTNNTN
                      ____________________________________________________________
consensus                                                NNTTNNNNNNGGGGAAAGNNTNNTN
 
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JMSF022I16+           TNNNGNTNNGGTTNTNTAAAAAATNNTNTANNTNNGATAGTNNTNNTNANANNGANGNNN
                      ____________________________________________________________
consensus             TNNNGNTNNGGTTNTNTAAAAAATNNTNTANNTNNGATAGTNNTNNTNANANNGANGNNN
 
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JMSF022I16+           GGAATTNCAGGTNCNNGNGAATNTTNGCNTTNGNCNACATATAAGANNCAAACAAAANNT
                      ____________________________________________________________
consensus             GGAATTNCAGGTNCNNGNGAATNTTNGCNTTNGNCNACATATAAGANNCAAACAAAANNT
 
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JMSF022I16+           GCAGCAGAAACAGCAGATAAGAGCAGCATGCCANCNTTNTTTNGAGGNGCAANTNNGCAG
                      ____________________________________________________________
consensus             GCAGCAGAAACAGCAGATAAGAGCAGCATGCCANCNTTNTTTNGAGGNGCAANTNNGCAG
 
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JMSF022I16+           ATCCAAACAAACAATCNTTNTTTNTCNTTAAACATNTTGGGAGGCTTTNTTGGTGGGATA
                      ____________________________________________________________
consensus             ATCCAAACAAACAATCNTTNTTTNTCNTTAAACATNTTGGGAGGCTTTNTTGGTGGGATA
 
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JMSF022I16+           GGTGGTGTAGTTTGGGTTGCCANTGAAATATTCTGGAATTGNTGCAAAGATCCATAACTC
                      ____________________________________________________________
consensus             GGTGGTGTAGTTTGGGTTGCCANTGAAATATTCTGGAATTGNTGCAAAGATCCATAACTC
 
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JMSF022I16+           CNTGAAGCACGAAGACCCAATGACCCNGTAGTCATTGTTGTCTGCTCAATCCCTCCCACT
JMFF010J05+                                                              CCTCCCACT
                      ____________________________________________________________
consensus             CNTGAAGCACGAAGACCCAATGACCCNGTAGTCATTGTTGTCTGCTCAATCCCTCCCACT
 
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JMSF022I16+           TCACCTTACATCCCCTCCTCTTCTCCTACACCCTCCAACTATTATCCCTCTCAAAATTCA
JMFF010J05+           TCACCTTACATCCCCTCCTCTTCTCCTACACCCTCCAACTATTATCCCTCTCAAAATTCA
                      ____________________________________________________________
consensus             TCACCTTACATCCCCTCCTCTTCTCCTACACCCTCCAACTATTATCCCTCTCAAAATTCA
 
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JMSF022I16+           AGAATTTCAATCAAAGCTTGAATCTTTACACTCAATGCCGCAATGTTTTTCCCACAGAAA
JMFF010J05+           AGAATTTCAATCAAAGCTTGAATCTTTACACTCAATGCCGCAATGTTTTTCCCACAGAAA
                      ____________________________________________________________
consensus             AGAATTTCAATCAAAGCTTGAATCTTTACACTCAATGCCGCAATGTTTTTCCCACAGAAA
 
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JMSF022I16+           ACCCCAGCAAGAACAAATTAACACCACAAAGCTAACTCGCACAGAGAAAACTCAATTCAT
JMFF010J05+           ACCCCAGCAAGAACAAATTAACACCACAAAGCTAACTCGCACAGAGAAAACTCAATTCAT
                      ____________________________________________________________
consensus             ACCCCAGCAAGAACAAATTAACACCACAAAGCTAACTCGCACAGAGAAAACTCAATTCAT
 
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JMSF022I16+           CAAGAAGATCAGACCGACATCCT                                     
JMFF010J05+           CAAGAAGATCAGACCGACATCCTAAATTATCTCTAAACCGAAATCCACCCCTCTTTCAAT
JMSF002O01+                                                            CCTCTTTCAAT
                      ____________________________________________________________
consensus             CAAGAAGATCAGACCGACATCCTAAATTATCTCTAAACCGAAATCCACCCCTCTTTCAAT
 
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JMFF010J05+           CTGTTCAGAATCAATGACAATGACCCAGTATCAAACTATCAATGCTGGTAAATATCACGG
JMSF002O01+           CTGTTCAGAATCAATGACAATGACCCAGTATCAAACTATCAATGCTGGTAAATATCACGG
                      ____________________________________________________________
consensus             CTGTTCAGAATCAATGACAATGACCCAGTATCAAACTATCAATGCTGGTAAATATCACGG
 
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JMFF010J05+           ATGCATTGCTCAAACATATACAGACGGCCCCATCAACACCGCATAGTACAGATACAAGCA
JMSF002O01+           ATGCATTGCTCAAACATATACAGACGGCCCCATCAACACCGCATAGTACAGATACAAGCA
                      ____________________________________________________________
consensus             ATGCATTGCTCAAACATATACAGACGGCCCCATCAACACCGCATAGTACAGATACAAGCA
 
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JMFF010J05+           GATGCAATTATGCAATCACTTTCCAAAGAAAAAACAAAGTACTAT               
JMSF002O01+           GATGCAATTATGCAATCACTTTCCAAAGAAAAAACAAAGTACTATAAAATAAATTAAATC
                      ____________________________________________________________
consensus             GATGCAATTATGCAATCACTTTCCAAAGAAAAAACAAAGTACTATAAAATAAATTAAATC
 
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JMSF002O01+           ATTCAAACCACACTTCTATTCTTTGACCCGCCAATCAAACTGTAATTGGGGGTGAGAAAA
                      ____________________________________________________________
consensus             ATTCAAACCACACTTCTATTCTTTGACCCGCCAATCAAACTGTAATTGGGGGTGAGAAAA
 
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JMSF002O01+           TTTTCACTGGAATCGAGATGTTAGGAGTGTGGATTCAAGGGTTTTGCGGGAATGTGAATC
                      ____________________________________________________________
consensus             TTTTCACTGGAATCGAGATGTTAGGAGTGTGGATTCAAGGGTTTTGCGGGAATGTGAATC