Contig 004917:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007J16Sequence614004917 (10)ref|XP_011085845.1|6e-75PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]771014810
JMFF009E24Sequence588004917 (10)ref|XP_011099906.1|8e-19PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]541001179 (5)ref|XP_009592532.1|8e-31PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF029I08Sequence441004917 (10)emb|CDP01639.1|6e-04unnamed protein product [Coffea canephora]
JMFF041D21Sequence631004917 (10)ref|XP_009592532.1|4e-29PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]633001179 (5)ref|XP_009592532.1|2e-59PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF048I11Sequence487004917 (10)ref|XP_011099906.1|4e-52PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]
JMFS067D03Sequence636004917 (10)ref|XP_011085845.1|2e-37PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]
JMFS141C06Sequence626004917 (10)emb|CDP01639.1|4e-35unnamed protein product [Coffea canephora]
JMSF002C03Sequence339004917 (10)508001179 (5)ref|XP_007032119.1|4e-28Receptor-like kinase 1 [Theobroma cacao] gb|EOY03045.1| Receptor-like kinase 1 [
JMSF006M12Sequence304004917 (10)390001179 (5)ref|XP_009592532.1|4e-55PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMSF008J05Sequence358004917 (10)687001179 (5)ref|XP_009592532.1|1e-97PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF007J16+                                          AATAAAAGAAGAATCAAAAGCAACCCAAT
                      ____________________________________________________________
consensus                                            AATAAAAGAAGAATCAAAAGCAACCCAAT
 
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JMFF007J16+           GACGCTGCCGACTACAATTCCGGCGATAGCCCCACCGGAAAGCTTCTTTTTACTCTTTGT
                      ____________________________________________________________
consensus             GACGCTGCCGACTACAATTCCGGCGATAGCCCCACCGGAAAGCTTCTTTTTACTCTTTGT
 
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JMFF007J16+           TTGCTGCCCATCGCAAAGATCAAGTGGCGCTCCGCACAGAGAATTCCCCTGAAACGCACT
JMFF048I11+                                                   GAATTCCCCTGAAACGCACT
                      ____________________________________________________________
consensus             TTGCTGCCCATCGCAAAGATCAAGTGGCGCTCCGCACAGAGAATTCCCCTGAAACGCACT
 
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JMFF007J16+           CCTGGGCTGAGTCGAGAGCTTTTGCGGAATCTGTCCAGTCAGAAGATTGCCGGAAACATT
JMFF048I11+           CCTGGGCGGAGTCGAGAGCTTTTGCGGAATCTGTCCAGTCAGAAGATTGCCGGAAACATT
                      ____________________________________________________________
consensus             CCTGGGCTGAGTCGAGAGCTTTTGCGGAATCTGTCCAGTCAGAAGATTGCCGGAAACATT
 
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JMFF007J16+           GAACTGGATCAATCCGGGCACTTTCACGTCCGGAATTTCCCCGGAAAACTGATTCTCCTC
JMFF048I11+           GAACTGGATCAATCCGGGCACTTTCACGTCCGGAATTTCCCCGGAAAACTGATTCTCCTC
                      ____________________________________________________________
consensus             GAACTGGATCAATCCGGGCACTTTCACGTCCGGAATTTCCCCGGAAAACTGATTCTCCTC
 
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JMFF007J16+           CAAGTACAGCGT-GGCCAAGCGCGTCAGATTGTTGACGGAAGGGGAAATCGAACCGGAGA
JMFF048I11+           CAAGTACAGCGTGGGCCAAGCGCGTCAGATTGTTGACGGAAGGGGAAATCGAACCGGAGA
                      ____________________________________________________________
consensus             CAAGTACAGCGTGGGCCAAGCGCGTCAGATTGTTGACGGAAGGGGAAATCGAACCGGAGA
 
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JMFF007J16+           AGTTATTGTGGGCAAGATTGAGGCGAACAAGGTTGGGCAATGAGAAGACACCGTCGGGAA
JMFF048I11+           AGTTATTGTGGGCAAGATTGAGGCGAACAAGGTTGGGCAATGAGAAGACACCGTCGGGAA
JMFS141C06+                                                                      A
JMFS067D03+                                                             CCGTCGGGAA
                      ____________________________________________________________
consensus             AGTTATTGTGGGCAAGATTGAGGCGAACAAGGTTGGGCAATGAGAAGACACCGTCGGGAA
 
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JMFF007J16+           TATCGCCGGAGAAGAAGTTGTGCTGGAGGTACACGTTCCGGAGATCCCGGAGAGAGGAGA
JMFF048I11+           TATCGCCGGAGAAGAAGTTGTGCTGGAGGTACACGTTCCGGAGATCCCGGAGAGAGGAGA
JMFF009E24+                                                                  GGAGA
JMFS141C06+           TATCGCCGGAGAAGAAGTTGTGCTGGAGGTACACGTTCCGGAGATCCCGGAGAGAGGAGA
JMFS067D03+           TATCGCCGGAGAAGAAGTTGTGCTGGAGGTACACGTTCCGGAGATCCCGGAGAGAGGAGA
JMFF041D21+                                      GGTACACGTTCCGGAGATCCCGGAGAGAGGAGA
                      ____________________________________________________________
consensus             TATCGCCGGAGAAGAAGTTGTGCTGGAGGTACACGTTCCGGAGATCCCGGAGAGAGGAGA
 
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JMFF007J16+           AGAGGTCGGAAGGAAGCAGACCCGACAGAGCATTGTAACGCAGACTCAAAGTCTGGAGGC
JMFF048I11+           AGAGGTCGGAAGGAAGCAGACCCGACAGAGCATTGTAACGCAGACTCAAAGTCTGGAGGC
JMFF009E24+           AGAGGTCGGAAGGAAGCAGACCCGACAGAGCATTGTAACGCAGACTCAAAGTCTGGAGGC
JMFS141C06+           AGAGGTCGGAAGGAAGCAGACCCGACAGAGCATTGTAACGCAGACTCAAAGTCTGGAGGC
JMFS067D03+           AGAGGTCGGAAGGAAGCAGACCCGACAGAGCATTGTAACGCAGACTCAAAGTCTGGAGGC
JMFF041D21+           AGAGGTCGGAAGGAAGCAGACCCGACAGAGCATTGTAACGCAGACTCAAAGTCTGGAGGC
                      ____________________________________________________________
consensus             AGAGGTCGGAAGGAAGCAGACCCGACAGAGCATTGTAACGCAGACTCAAAGTCTGGAGGC
 
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JMFF007J16+           GCGTGAGGTTAGAAATGGTTCCGGGCGGAATAGCCCCGGAGAGACCCATCCCCGG-AAGG
JMFF048I11+           GCGTGAGGTTAGAAATGGTTCCGGGCGGAATAGCCCCGGAGAGACCCATCCCCGG-AAGG
JMFF009E24+           GCGTGAGGTTAGAAATGGTTCCGGGCGGAATAGCCCCGGAGAGACCCATCCCCGGAAAGG
JMFS141C06+           GCGTGAGGTTAGAAATGGTTCCGGGCGGAATAGCCCCGGAGAGACCCATCCCCGG-AAGG
JMFS067D03+           GCGTGAGGTTAGAAATGGTTCCGGGCGGAATAGCCCCGGAGAGACCCATCCCCGG-AAGG
JMFF041D21+           GCGTGAGGTTAGAAATGGTTCCGGGCGGAATAGCCCCGGAGAGACCCATCCCCGG-AAGG
                      ____________________________________________________________
consensus             GCGTGAGGTTAGAAATGGTTCCGGGCGGAATAGCCCCGGAGAGACCCATCCCCGG-AAGG
 
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JMFF007J16+           TGAAGCTCGGCGACATATTTCTTGTCGGAGGAGCACTGGACTC                 
JMFF048I11+           TGAAGCTCGGCGACATATTTCTTGTCGGAGGAGCACTGGACTCACGGC            
JMFF009E24+           TGAAGCTCGGCGACATATTTCTTGTCGGAGGAGCACTGGACTCCCGGCCACAAACATATG
JMFS141C06+           TGAAGCTCGGCGACATATTTCTTGTCGGAGGAGCACTGGACTCCCGGCCACAAACATATG
JMFS067D03+           TGAAGCTCGGCGACATATTTCTTGTCGGAGGAGCACTGGACTCCCGGCCACAAACATATG
JMFF029I08+                               CTTGTCGGAGGAGCACTGGACTCCCGGCCACAAACATATG
JMFF041D21+           TGAAGCTCGGCGACATATTTCTTGTCGGAGGAGCACTGGACTCCCGGCCACAAACATATG
                      ____________________________________________________________
consensus             TGAAGCTCGGCGACATATTTCTTGTCGGAGGAGCACTGGACTCCCGGCCACAAACATATG
 
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JMFF009E24+           TTCGGTTCCGTAAGGTTCCAAAGGAGAGAGCGGCCGCCCACGGCTGATCGGAGCGCCAAG
JMFS141C06+           TTCGGTTCCGTAAGGTTCCAAAGGAGAGAGCGGCCGCCCACGGCTGATCGGAGCGCCAAG
JMFS067D03+           TTCGGTTCCGTAAGGTTCCAAAGGAGAGAGCGGCCGCCCACGGCTGATCGGAGCGCCAAG
JMFF029I08+           TTCGGTTCCGTAAGGTTCCAAAGGAGAGAGCGGTCGCCCACGGCTGATCGGAGCGCCAAG
JMSF008J05+                                                                      G
JMFF041D21+           TTCGGTTCCGTAAGGTTCCAAAGGAGAGAGCGGCCGCCCACGGCTGATCGGAGCGCCAAG
                      ____________________________________________________________
consensus             TTCGGTTCCGTAAGGTTCCAAAGGAGAGAGCGGCCGCCCACGGCTGATCGGAGCGCCAAG
 
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JMFF009E24+           AGGGCGGCGCGGTCGGAGGCGAGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
JMFS141C06+           AGGGCGGCGCGGTCGGAGGCGAGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
JMFS067D03+           AGGGCGGCGCGGTCGGAGGCGAGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
JMFF029I08+           AGGGCGGCGCGGTCGGAGGCGAGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
JMSF008J05+           AGGGCGNCGCGTTCGGAGGCGAGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
JMFF041D21+           AGGGCGGCGCGGTCGGAGGCGAGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
JMSF006M12+                                                                 AGGAAG
JMSF002C03+                                AGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
                      ____________________________________________________________
consensus             AGGGCGGCGCGGTCGGAGGCGAGATCAGAGGCGGCGGGGGACGGTAGAATGAAGAGGAAG
 
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JMFF009E24+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
JMFS141C06+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
JMFS067D03+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
JMFF029I08+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
JMSF008J05+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
JMFF041D21+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
JMSF006M12+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
JMSF002C03+           ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
                      ____________________________________________________________
consensus             ATGGAAATGCAGGTGGCGAAGTAGAAGAAGAAGAAGAAGCGAGATCTCATTGTAGTTTTT
 
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JMFF009E24+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
JMFS141C06+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
JMFS067D03+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
JMFF029I08+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
JMSF008J05+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
JMFF041D21+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
JMSF006M12+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
JMSF002C03+           GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
                      ____________________________________________________________
consensus             GGTGAAAACGATGAGAAGAAAACAGAAAAGATTGTAACTTTGTCAGTTTTCCAGAAATCT
 
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JMFF009E24+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
JMFS141C06+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
JMFS067D03+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
JMFF029I08+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
JMSF008J05+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
JMFF041D21+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
JMSF006M12+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
JMSF002C03+           ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
                      ____________________________________________________________
consensus             ATAGCAGTCCAAACTCCTCGGCCACTAATCTTTCTGGAATTATGGACTGCTACAAAGTGG
 
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JMFF009E24+           GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
JMFS141C06+           GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
JMFS067D03+           GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
JMFF029I08+           GATTCATGTTNTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
JMSF008J05+           GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
JMFF041D21+           GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
JMSF006M12+           GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
JMSF002C03+           GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
                      ____________________________________________________________
consensus             GATTCATGTTCTTGTTCTTCTTCTTCTTGTCAGTATTGATATTCATTTCAGTCAGAGATA
 
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JMFF009E24+           AAAGAGAGAGAGAGAGAG                                          
JMFS141C06+           AAAGAGAGAGAGAGAGAGAGTTGCGA                                  
JMFS067D03+           AAAGAGAGAGAGAGAGAGAGTTGCGAG                                 
JMFF029I08+           AAAGAGAGAGAGAGAGAGAGTTGCGAGTTGCCAAATACCAA                   
JMSF008J05+           AAAGAGAGAGAGAGAGAGAGTTGCGAGTTGCCAAATGCCAAGGACGGTAAAGGACT    
JMFF041D21+           AAAGAGAGAGAGAGAGAGAGTTGCGAGTTGCCAAATGCCAAGGACGGTAAAGGACT    
JMSF006M12+           AAAGAGAGAGAGAGAGAGAGTTGCGAGTTGCCAAATGCCAAGGACGGTAAAGGACT    
JMSF002C03+           AAAGAGAGAGAGAGAGAGAGTTGCGAGTTGCCAAATGCCAAGGACGGTAAAGGACTTCTC
                      ____________________________________________________________
consensus             AAAGAGAGAGAGAGAGAGAGTTGCGAGTTGCCAAATGCCAAGGACGGTAAAGGACTTCTC