Contig 004915:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002A09Sequence237004915 (2)754022425ref|XP_011080957.1|313PREDICTED: uncharacterized protein LOC105164093 [Sesamum indicum] ref|XP_0110809
JMSF005J20Sequence291004915 (2)465005669 (4)ref|XP_009606738.1|3e-46PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Nicotiana tom

Alignment

This contig is upended


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JMSF005J20+                  TTCAACCACAAGCAGAAATTTGAGAAATAAGCAATAAAGAAAAGAGATTACTG
                      ____________________________________________________________
consensus                    TTCAACCACAAGCAGAAATTTGAGAAATAAGCAATAAAGAAAAGAGATTACTG
 
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JMSF005J20+           GCGTATAAGCGTGTTACTCCGTATTATTTACAGATAGTTCAACAGGGGGATAAAAACTAA
JMSF002A09+             GTATAAGCGTGTTACTCCGTATTA-TTACAGATAGTTCANCAGGGGGATAAAAACTAA
                      ____________________________________________________________
consensus             GCGTATAAGCGTGTTACTCCGTATTATTTACAGATAGTTCAACAGGGGGATAAAAACTAA
 
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JMSF005J20+           ACAGTAAAGAAAATAAACCCAACAAATTTCAGAAAATTTCCAACCAATTGAAGGAATTAG
JMSF002A09+           ACAGTAAAGAAAATAAACCCAACAAATTTCAGAAAATTTCCAACCAATTGAAGGAATTAG
                      ____________________________________________________________
consensus             ACAGTAAAGAAAATAAACCCAACAAATTTCAGAAAATTTCCAACCAATTGAAGGAATTAG
 
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JMSF005J20+           AATCTGATATTTGTGGGCTTATAAATAAGAATCGTATTCTGGGGAATTATTATTCTATAT
JMSF002A09+           AATCTGATATTTGTGGGCTTATAAATAAGAATCGTATTCTGGGGAATTATTATTCTATAT
                      ____________________________________________________________
consensus             AATCTGATATTTGTGGGCTTATAAATAAGAATCGTATTCTGGGGAATTATTATTCTATAT
 
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JMSF005J20+           ATATGTATGTACNCGGAGAGAGAAGGGAAACGTATGAACCTGGGAGACCAGAAAGAC   
JMSF002A09+           ATATGTATGTACACGGAGAGAGAAGGGAAACGTATGAACCTGGGAGACCAGAAAGACGCC
                      ____________________________________________________________
consensus             ATATGTATGTACACGGAGAGAGAAGGGAAACGTATGAACCTGGGAGACCAGAAAGACGCC