Contig 004907:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001I02Sequence347004907 (3)sp|P14716.1|SPOR2_IPOBA1e-11RecName: Full=Sporamin B; AltName: Full=Clone PIM0535; Flags: Precursor [Ipomoe724019204gb|AFR60863.1|3e-41sporamin B [Ipomoea batatas]
JMSF049O07Sequence625004907 (3)gb|AFR60863.1|3e-45sporamin B [Ipomoea batatas]781004907 (3)gb|AFR60863.1|3e-50sporamin B [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049O07- AACAGCACACAACAATCTAGTATAGGATCGGTTGTAAGTTGTGAAACCTGCAACTA
                      ____________________________________________________________
consensus AACAGCACACAACAATCTAGTATAGGATCGGTTGTAAGTTGTGAAACCTGCAACTA
 
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rJMSF049O07- ACGTCACTTATTTAATTAACCTGAAAGATCAGACCCCATGCACACCTGACACCCCAGCTA
                      ____________________________________________________________
consensus ACGTCACTTATTTAATTAACCTGAAAGATCAGACCCCATGCACACCTGACACCCCAGCTA
 
. : . : . : . : . : . :
rJMSF049O07- GCTTACGGTGTTAAATTAAATCACAATCTAGCTTTCTTGAACACAATAGAGAAAAAAGAA
                      ____________________________________________________________
consensus GCTTACGGTGTTAAATTAAATCACAATCTAGCTTTCTTGAACACAATAGAGAAAAAAGAA
 
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rJMSF049O07- TTTTCAGACAGAGCCAAACGCAGATTCCTGAAGGGCCCGAAGACTAAGCCAACGTTGTAG
JMSF049O07+ TAAGCCAACGTTGTAG
                      ____________________________________________________________
consensus TTTTCAGACAGAGCCAAACGCAGATTCCTGAAGGGCCCGAAGACTAAGCCAACGTTGTAG
 
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rJMSF049O07- CATTTGTGGCCGCCAAAGGGACAATAAGTGAATTTGTAAGCCTTATGCTCCGGCACCACT
JMSF049O07+ CATTTGTGGCCGCCAAAGGGACAATAAGTGAATTTGTAAGCCTTATGCTCCGGCACCACT
                      ____________________________________________________________
consensus CATTTGTGGCCGCCAAAGGGACAATAAGTGAATTTGTAAGCCTTATGCTCCGGCACCACT
 
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rJMSF049O07- TCAATCATGAACTGGCTGCTAAGGCTGGGGACGAACTGGGTGGTGTTCAAGATGTAATCG
JMSF049O07+ TCAATCATGAACTGGCTGCTAAGGCTGGGGACGAACTGGGTGGTGTTCAAGATGTAATCG
                      ____________________________________________________________
consensus TCAATCATGAACTGGCTGCTAAGGCTGGGGACGAACTGGGTGGTGTTCAAGATGTAATCG
 
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rJMSF049O07- CCGCTTGACGCCTCGTACCGGATCGCCCAATAGACATTACCCAAACAAACCTGGGGCATA
JMSF049O07+ CCGCTTGACGCCTCGTACCGGATCGCCCAATAGACATTACCCAAACAAACCTGGGGCATA
                      ____________________________________________________________
consensus CCGCTTGACGCCTCGTACCGGATCGCCCAATAGACATTACCCAAACAAACCTGGGGCATA
 
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rJMSF049O07- TCAACGATGGATTCGAAGCTCTGCAACCTCGACGTCAAGACGACTGGGGCGTTGGGGTCC
JMSF049O07+ TCAACGATGGATTCGAAGCTCTGCAACCTCGACGTCAAGACGACTGGGGCGTTGGGGTCC
                      ____________________________________________________________
consensus TCAACGATGGATTCGAAGCTCTGCAACCTCGACGTCAAGACGACTGGGGCGTTGGGGTCC
 
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rJMSF049O07- GCCGGCCTGATCCTGATGGGGTGGCCGTCGGATAAGGGCCGCGATAAGAGCAATCTGGTC
JMSF049O07+ GCCGGCCTGATCCTGATGGGGTGGCCGTCGGATAAGGGCCGCGATAAGAGCAATCTGGTC
JMSF001I02+ TGATGGGGTGGCCGTCGGATAAGGGCCGCGATAAGAGCAATCTGGTC
                      ____________________________________________________________
consensus GCCGGCCTGATCCTGATGGGGTGGCCGTCGGATAAGGGCCGCGATAAGAGCAATCTGGTC
 
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rJMSF049O07- TGGCATGTTGCAGAAACTGGCCAGTCTACTCGCACTCCTACGATGAGGGCTCCCGGATTG
JMSF049O07+ TGGCATGTTGCAGAAACTGGCCAGTCTACTCGCACTCCTACGATGAGGGCTCCCGGATTG
JMSF001I02+ TGGCATGTTGCAGAAACTGGCCAGTCTACTCGCACTCCTACGATGAGGGCTCCCGGATTG
                      ____________________________________________________________
consensus TGGCATGTTGCAGAAACTGGCCAGTCTACTCGCACTCCTACGATGAGGGCTCCCGGATTG
 
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rJMSF049O07- CCGATGGAGTTTATGTAGTATGTTTCGCCGGCCCGGAGCTCGTCCCCGTCGGTGTCCAGC
JMSF049O07+ CCGATGGAGTTTATGTAGTATGTTTCGCCGGCCCGGAGCTCGTCCCCGTCGGTGTCCAGC
JMSF001I02+ CCGATGGAGTTTATGTAGTATGTTTCGCCGGCCCGGAGCTCGTCCCCGTCGGTGTCCAGC
                      ____________________________________________________________
consensus CCGATGGAGTTTATGTAGTATGTTTCGCCGGCCCGGAGCTCGTCCCCGTCGGTGTCCAGC
 
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rJMSF049O07- ACCGGAGTGCCAGACGCTACTGCTACGTCGGCGGTACGAAGGCGAATGGGATTGAAAGTA
JMSF049O07+ ACCGGAGTGCCAGACGCTACTGCTACGTCGGCGGTACGAAGGCGAATGGGATTGAAAGTA
JMSF001I02+ ACCGGAGTGCCAGACGCTACTGCTACGTCGGCGGTACGAAGGCGAATGGGATTGAAAGTA
                      ____________________________________________________________
consensus ACCGGAGTGCCAGACGCTACTGCTACGTCGGCGGTACGAAGGCGAATGGGATTGAAAGTA
 
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rJMSF049O07- GAATAAGTTGGGTTGGGAAGGAGATAGAGGGAAAGTGCGAATAANANTGCTGTGAGGGTT
JMSF049O07+ GAATAAGTTGGGTTGGGAAGGAGATAGAGGGAAAGTGCGAATAAGAGTGCTGTGAGGGTT
JMSF001I02+ GAATAAGTTGGGTTGGGAAGGAGATAGAGGGAAAGTGCGAATAAGAGTGCTGTGAGGGTT
                      ____________________________________________________________
consensus GAATAAGTTGGGTTGGGAAGGAGATAGAGGGAAAGTGCGAATAAGAGTGCTGTGAGGGTT
 
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rJMSF049O07- T
JMSF049O07+ TTCAT
JMSF001I02+ TTCATGTTGACGACAACTTGGGAGAAGAGGTAGTTATGAATTTATGATGTTTAATTTGTC
                      ____________________________________________________________
consensus TTCATGTTGACGACAACTTGGGAGAAGAGGTAGTTATGAATTTATGATGTTTAATTTGTC