Contig 004905:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036E01Sequence544004905 (2)emb|CDP20510.1|4e-29unnamed protein product [Coffea canephora]
JMSF001F01Sequence406004905 (2)779017039ref|XP_009627145.1|1e-67PREDICTED: cation/calcium exchanger 4-like [Nicotiana tomentosiformis] ref|XP_00

Alignment

This contig is upended


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JMFF036E01+             TCAAGAAGTCACAACTACTCTCATAGCCCCTATGATCAGATAATCCACTACAGACATC
                      ____________________________________________________________
consensus               TCAAGAAGTCACAACTACTCTCATAGCCCCTATGATCAGATAATCCACTACAGACATC
 
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JMFF036E01+           AGGCCTCTCTATGGACAAATCACCGTGATCCGACCCGTTTACACCAATTGAAGAATTAAG
                      ____________________________________________________________
consensus             AGGCCTCTCTATGGACAAATCACCGTGATCCGACCCGTTTACACCAATTGAAGAATTAAG
 
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JMFF036E01+           GTTCACTTCTAACATTCCTCGATGGATAACTCTCATAGGGCTTGACCAAGCATGAAACCC
                      ____________________________________________________________
consensus             GTTCACTTCTAACATTCCTCGATGGATAACTCTCATAGGGCTTGACCAAGCATGAAACCC
 
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JMFF036E01+           ACTTTTTGACATCCATTCAATGGAAGAAGATGATTGCTGAAGACGTGGATTTCTCAAAAT
                      ____________________________________________________________
consensus             ACTTTTTGACATCCATTCAATGGAAGAAGATGATTGCTGAAGACGTGGATTTCTCAAAAT
 
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JMFF036E01+           ATATTCCCGGTTGTAGAATAAGAATATTAAGGCCAAAGAACAAAACCCATTAAAAACCCC
                      ____________________________________________________________
consensus             ATATTCCCGGTTGTAGAATAAGAATATTAAGGCCAAAGAACAAAACCCATTAAAAACCCC
 
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JMFF036E01+           ACGAATTCTGGGACTTCTTCTAGTGTAAAATTGTGCCATTATCTAACACATAAAATGCAA
JMSF001F01+                         TTCTTCTAGTGTAAAATTGTGCCATTATCTAACACATAAAATGCAA
                      ____________________________________________________________
consensus             ACGAATTCTGGGACTTCTTCTAGTGTAAAATTGTGCCATTATCTAACACATAAAATGCAA
 
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JMFF036E01+           TTTCACATACCCTATATACAGAGCCGATAAAATCCCAACCCTAGGGTTAATAACATACAA
JMSF001F01+           TTTCACATACCCTATATACAGAGCCGATAAAATCCCAACCCTAGGGTTAATAACATACAA
                      ____________________________________________________________
consensus             TTTCACATACCCTATATACAGAGCCGATAAAATCCCAACCCTAGGGTTAATAACATACAA
 
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JMFF036E01+           TACTAGGGTTTTGATTCCGGAACTGAACTGACCTTCTAGAACCGATGGCGTGAAAATTGA
JMSF001F01+           TACTAGGGTTTTGATTCCGGAACTGAACTGACCTTCTAGAACCGATGGCGTGAAAATTGA
                      ____________________________________________________________
consensus             TACTAGGGTTTTGATTCCGGAACTGAACTGACCTTCTAGAACCGATGGCGTGAAAATTGA
 
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JMFF036E01+           TGTGGGCAGTTGAATTGCAGGTCAATCAGCTCTGGCAATGGCGAATTTCTTCGTGAAAAT
JMSF001F01+           TGTGGGCAGTTGAATTGCAGGTCAATCAGCTCTGGCAATGGCGAATTTCTTCGTGAAAAT
                      ____________________________________________________________
consensus             TGTGGGCAGTTGAATTGCAGGTCAATCAGCTCTGGCAATGGCGAATTTCTTCGTGAAAAT
 
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JMFF036E01+           GAAGCT                                                      
JMSF001F01+           GAAGCTCCAGGATTTTTCAAATAGGCCTCGAATAAAAGGAAGGACCGAATGAATACGGGC
                      ____________________________________________________________
consensus             GAAGCTCCAGGATTTTTCAAATAGGCCTCGAATAAAAGGAAGGACCGAATGAATACGGGC
 
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JMSF001F01+           GGGTCAGTTCGGGGCGGGTCGAACAGTTGCGGAGCCTGGTGAATGTGAACGTGTGATCCT
                      ____________________________________________________________
consensus             GGGTCAGTTCGGGGCGGGTCGAACAGTTGCGGAGCCTGGTGAATGTGAACGTGTGATCCT
 
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JMSF001F01+           TCCTCGAAGCTGCTTGTTAGGTTATTTCCTTTTGGTTTACTCGAAAGAGAAGAGTCCAGC
                      ____________________________________________________________
consensus             TCCTCGAAGCTGCTTGTTAGGTTATTTCCTTTTGGTTTACTCGAAAGAGAAGAGTCCAGC