Contig 004900:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002K23Sequence264004900 (6)ref|XP_010656628.1|55.5PREDICTED: uncharacterized protein LOC104880710 [Vitis vinifera]535005512 (12)ref|XP_009789305.1|2e-52PREDICTED: serine carboxypeptidase II-2 [Nicotiana sylvestris]
JMFF038H04Sequence504004900 (6)emb|CDO99140.1|3e-17unnamed protein product [Coffea canephora]714009751 (2)emb|CDO99140.1|1e-14unnamed protein product [Coffea canephora]
JMFS155A05Sequence592004900 (6)ref|XP_009630744.1|2e-51PREDICTED: serine carboxypeptidase II-2 [Nicotiana tomentosiformis]
JMFS162E11Sequence618004900 (6)ref|XP_009630744.1|2e-51PREDICTED: serine carboxypeptidase II-2 [Nicotiana tomentosiformis]
JMFS168D08Sequence629004900 (6)ref|XP_009630744.1|2e-51PREDICTED: serine carboxypeptidase II-2 [Nicotiana tomentosiformis]
JMSF052G21Sequence713006426 (6)ref|XP_006358874.1|6e-85PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like869004900 (6)emb|CDP09802.1|4e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF052G21+                                                TTTATTCTAACTGTAAAAGATT
                      ____________________________________________________________
consensus                                                   TTTATTCTAACTGTAAAAGATT
 
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rJMSF052G21+          TATCCCCAAATATAGGTGTCTTATGGTATTTCTTTGCTGAAGTCTTTGATTTCTTCAGAA
                      ____________________________________________________________
consensus             TATCCCCAAATATAGGTGTCTTATGGTATTTCTTTGCTGAAGTCTTTGATTTCTTCAGAA
 
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rJMSF052G21+          GCTTTTTTCTTATAGTTTTTCATGTAAACATCCTCTTCATGATCCTGCCATTAGCCATGC
                      ____________________________________________________________
consensus             GCTTTTTTCTTATAGTTTTTCATGTAAACATCCTCTTCATGATCCTGCCATTAGCCATGC
 
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rJMSF052G21+          GACTATACAACAGGCCCTGCTTTCTGGCTTTTGTTTACATGGCAATATGTTCAATGCTTA
                      ____________________________________________________________
consensus             GACTATACAACAGGCCCTGCTTTCTGGCTTTTGTTTACATGGCAATATGTTCAATGCTTA
 
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rJMSF052G21+          AATCTTATCCTTCAGTTGGAGACTCGGCTTTATACTTGGGTTTATTGGCTTTGTTTATCA
                      ____________________________________________________________
consensus             AATCTTATCCTTCAGTTGGAGACTCGGCTTTATACTTGGGTTTATTGGCTTTGTTTATCA
 
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rJMSF052G21+          ACGAATTGTCAGAAATGCCATTTTCTTTCTTCCTATTCTGTGGATATGTGGGTGTCTCCC
                      ____________________________________________________________
consensus             ACGAATTGTCAGAAATGCCATTTTCTTTCTTCCTATTCTGTGGATATGTGGGTGTCTCCC
 
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rJMSF052G21+          TTTTAAGCCCAGTAATGCACAACCTATGGATATGGAGGGGTACTGGAAATGCAAACTTCT
                      ____________________________________________________________
consensus             TTTTAAGCCCAGTAATGCACAACCTATGGATATGGAGGGGTACTGGAAATGCAAACTTCT
 
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JMFF038H04-                                              GGTGAGGTAGTGGGCTTTGCTCGGA
rJMSF052G21+          ATTTTGCAACTGCTATGGGATACGCCTGCTTCCAGGGTGAGGTAGTGGGCTTTGCTCGGA
                      ____________________________________________________________
consensus             ATTTTGCAACTGCTATGGGATACGCCTGCTTCCAGGGTGAGGTAGTGGGCTTTGCTCGGA
 
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JMFF038H04-           ACAGGAGGACGACGCCGGAGCTCGAACTGCGCCGCCATCGGAGCCTCCAC          
rJMSF052G21+          ACAGGAGGACGATGCCGGAGCTCGAATCGCACCGCCATCGGAGCCTCCACGCGCCGCCGC
                      ____________________________________________________________
consensus             ACAGGAGGACGATGCCGGAGCTCGAATTGCGCCGCCATCGGAGCCTCCACGCGCCGCCGC
 
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rJMSF052G21+          CGCCGCTGCTCCGACGCCACGCGCCGGCGCGTGAGGCAGATTCCGGCGTCTTCTCCGGCT
                      ____________________________________________________________
consensus             CGCCGCTGCTCCGACGCCACGCGCCGGCGCGTGAGGCAGATTCCGGCGTCTTCTCCGGCT
 
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rJMSF052G21+          GAAAATTACACCGGTGAACTCGCCTTAGTGTGTAGGTTCTGCCCATGTATGTTTTGTGGG
JMFS162E11+                                                  TGCCCATGTATGTTTTGTGGG
                      ____________________________________________________________
consensus             GAAAATTACACCGGTGAACTCGCCTTAGTGTGTAGGTTCTGCCCATGTATGTTTTGTGGG
 
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rJMSF052G21+          GTTTTGGGTTGTATTTTGCACTTAGGCGAGGCGAGCGGACTAGGCGCAAGGCCGTGACCG
JMFS162E11+           GTTNTGAGTTGTATTTTGCACTTAGGCGAGGCGAGCGAACTAGGCGCAAGGCCGTGACCG
                      ____________________________________________________________
consensus             GTTTTGGGTTGTATTTTGCACTTAGGCGAGGCGAGCGGACTAGGCGCAAGGCCGTGACCG
 
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rJMSF052G21+          CCCAGACGCCTAGCCGGCGCCTAGGCGTCGCCTTGATAACCCTG                
JMFS162E11+           CCCAGACGCCTAGGCGGCGCCTAGGCGACGCCTTGATAACCCTGGTTTGGATAACTATAT
JMFS168D08+                                                                     AT
                      ____________________________________________________________
consensus             CCCAGACGCCTAGGCGGCGCCTAGGCGTCGCCTTGATAACCCTGGTTTGGATAACTATAT
 
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JMFS162E11+           ACCTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
JMFS155A05+             CTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
JMFS168D08+           ACCTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
                      ____________________________________________________________
consensus             ACCTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
 
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JMFS162E11+           AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
JMFS155A05+           AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
JMFS168D08+           AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
                      ____________________________________________________________
consensus             AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
 
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JMFS162E11+           CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
JMFS155A05+           CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
JMFS168D08+           CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
                      ____________________________________________________________
consensus             CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
 
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JMFS162E11+           TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
JMFS155A05+           TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
JMFF002K23+                               TCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
JMFS168D08+           TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
                      ____________________________________________________________
consensus             TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
 
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JMFS162E11+           GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
JMFS155A05+           GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
JMFF002K23+           GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
JMFS168D08+           GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
                      ____________________________________________________________
consensus             GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
 
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JMFS162E11+           CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
JMFS155A05+           CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
JMFF002K23+           CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
JMFS168D08+           CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
                      ____________________________________________________________
consensus             CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
 
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JMFS162E11+           GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
JMFS155A05+           GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCT    
JMFF002K23+           GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
JMFS168D08+           GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
                      ____________________________________________________________
consensus             GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
 
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JMFS162E11+           TCGGATTGAATGAAGACTATATAATAAGATAGAGGGTTGTTCTGAGTCTTTGTTAAA   
JMFF002K23+           TC                                                          
JMFS168D08+           TCGGATTGAATGAAGACTATATAATAAGATAGAGGGTTGTTCTGAGTCTTTGTTAAAGCC
                      ____________________________________________________________
consensus             TCGGATTGAATGAAGACTATATAATAAGATAGAGGGTTGTTCTGAGTCTTTGTTAAAGCC