Contig 004898:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C12Sequence605004898 (3)ref|XP_009612244.1|4e-55PREDICTED: CBL-interacting serine/threonine-protein kinase 14-like [Nicotiana t656009715 (2)ref|XP_009612244.1|7e-60PREDICTED: CBL-interacting serine/threonine-protein kinase 14-like [Nicotiana t
JMFF028O16Sequence497004898 (3)ref|XP_009612244.1|4e-34PREDICTED: CBL-interacting serine/threonine-protein kinase 14-like [Nicotiana t728009715 (2)ref|XP_009612244.1|2e-67PREDICTED: CBL-interacting serine/threonine-protein kinase 14-like [Nicotiana t
JMFS166C03Sequence538004898 (3)ref|XP_009612244.1|4e-41PREDICTED: CBL-interacting serine/threonine-protein kinase 14-like [Nicotiana t

Alignment

This contig is upended


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JMFF006C12+                                                            CTTGAGATCGC
                      ____________________________________________________________
consensus                                                              CTTGAGATCGC
 
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JMFF006C12+           GGTGGAAGACGCCGCGGGAGTGACAGTAACCGACGGCGGAGATGAGCTGCTGAAAGTACT
                      ____________________________________________________________
consensus             GGTGGAAGACGCCGCGGGAGTGACAGTAACCGACGGCGGAGATGAGCTGCTGAAAGTACT
 
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JMFF006C12+           TACGGCTGAGATCCTCACTGAACCGCCCCTTGGCCACCTTGGTGAAGAGCTCCCCGCCTT
JMFF028O16+                                                CTTGGTGAAGAGCTCCCCGCCTT
                      ____________________________________________________________
consensus             TACGGCTGAGATCCTCACTGAACCGCCCCTTGGCCACCTTGGTGAAGAGCTCCCCGCCTT
 
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JMFF006C12+           TGGCGAACTCCATCACGAAATAGATCTTCGTCTTGGTAGCGAGGACCTCCAGGAGGGCGC
JMFF028O16+           TGGCGAACTCCATCACGAAATAGATCTTCGTCTTGGTAGCGAGGACCTCCAGGAGGGCGC
JMFS166C03+            GGCGAACTCCATCACGAAATAGATCTTCGTCTTGGTAGCGAGGACCTCCAGGA-GGCGC
                      ____________________________________________________________
consensus             TGGCGAACTCCATCACGAAATAGATCTTCGTCTTGGTAGCGAGGACCTCCAGGAGGGCGC
 
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JMFF006C12+           ACGATATGCTGGTGGCGCAGCCGGCGCATGATAGAAACCTCCCGTTTGACGTGACCCGTG
JMFF028O16+           ACGATATGCTGGTGGCGCAGCCGGCGCATGATAGAAACCTCCCGTTTGACGTGACCCGTG
JMFS166C03+           ACGATATGCTGGTGGCGCAGCCGGCGCATGATAGAAACCTCCCGTTTGACGTGACCCGTG
                      ____________________________________________________________
consensus             ACGATATGCTGGTGGCGCAGCCGGCGCATGATAGAAACCTCCCGTTTGACGTGACCCGTG
 
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JMFF006C12+           AGGCCGCTCTTCAGAATCCTGTGTTTGCTCACCGCTTTTATCGCCACGCTCTGCCCCGTC
JMFF028O16+           AGGCCGCTCTTCAGAATCCTGTGTTTGCTCACCGCTTTTATCGCCACGCTCTGCCCCGTC
JMFS166C03+           AGGCCGCTCTTCAGAATCCTGTGTTTGCTCACCGCTTTTATCGCCACGCTCTGCCCCGTC
                      ____________________________________________________________
consensus             AGGCCGCTCTTCAGAATCCTGTGTTTGCTCACCGCTTTTATCGCCACGCTCTGCCCCGTC
 
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JMFF006C12+           CTGATGACCCGCGCGTGATAAACCTTCGCGAAAGCCCCACACCCAAGCAGCTTCCCCAGC
JMFF028O16+           CTGATGACCCGCGCGTGATAAACCTTCGCGAAAGCCCCACACCCAAGCAGCTTCCCCAGC
JMFS166C03+           CTGATGACCCGCGCGTGATAAACCTTCGCGAAAGCCCCACACCCAAGCAGCTTCCCCAGC
                      ____________________________________________________________
consensus             CTGATGACCCGCGCGTGATAAACCTTCGCGAAAGCCCCACACCCAAGCAGCTTCCCCAGC
 
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JMFF006C12+           TCGTATTTCCCCAGAATTCTCCGGTTCGAATCCTCCTCTCCGGCCGCCGCCAGCAGCGAA
JMFF028O16+           TCGTATTTCCCCAGAATTCTCCGGTTCGAATCCTCCTCTCCGGCCGCCGCCAGCAGCGAA
JMFS166C03+           TCGTATTTCCCCAGAATTCTCCGGTTCGAATCCTCCTCTCCGGCCGCCGCCAGCAGCGAA
                      ____________________________________________________________
consensus             TCGTATTTCCCCAGAATTCTCCGGTTCGAATCCTCCTCTCCGGCCGCCGCCAGCAGCGAA
 
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JMFF006C12+           CAGCTCTCCCCACTCATTCTCAATTTCAATCCACCAAACTCGATCGCTACAATCAAGAAA
JMFF028O16+           CAGCTCTCCCCACTCATTCTCAATTTCAATCCACCAAACTCGATCGCTACAATCAAGAAA
JMFS166C03+           CAGCTCTCCCCACTCATTCTCAATTTCAATCCACCAAACTCGATCGCTACAATCAAGAAA
                      ____________________________________________________________
consensus             CAGCTCTCCCCACTCATTCTCAATTTCAATCCACCAAACTCGATCGCTACAATCAAGAAA
 
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JMFF006C12+           GAAGCTCTTGGTTTCCAGGATCTAGAAACCAATTCAATGTATTATATTAGAAGAAGCTAA
JMFF028O16+           GAAGCTCTTGGTTTCCAGGATCTAGAAACCAATTCAATGTATTATATTAGAAGAAGCTAA
JMFS166C03+           GAAGCTCTTGGTTTCCAGGATCTAGAAACCAATTCAATGTATTATATTAGAAGAAGCTAA
                      ____________________________________________________________
consensus             GAAGCTCTTGGTTTCCAGGATCTAGAAACCAATTCAATGTATTATATTAGAAGAAGCTAA
 
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JMFF006C12+           ACACAGACTCCAGGAAGAAGGTTGCAGCTTGCAGGTTTAGGAAGGACGGAAGGT      
JMFF028O16+           ACACAGACTCCAGGAAGAAGGTTGCAGCTTGCAGGTTTAGGAAGGAAGGAAGGT      
JMFS166C03+           ACACAGACTCCAGGAAGAAGGTTGCAGCTTGCAGGTTTAGGAAGGAAGGAAGGTGAGAGA
                      ____________________________________________________________
consensus             ACACAGACTCCAGGAAGAAGGTTGCAGCTTGCAGGTTTAGGAAGGAAGGAAGGTGAGAGA
 
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JMFS166C03+           TGACAATGGCAATGGAGAATATTAAGAGAAAAGAAGGAAGATTCCCGAAAATGTACGGTT
                      ____________________________________________________________
consensus             TGACAATGGCAATGGAGAATATTAAGAGAAAAGAAGGAAGATTCCCGAAAATGTACGGTT