Contig 004893:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS010F09Sequence597004893 (11)ref|XP_009421003.1|1e-99PREDICTED: staphylococcal nuclease domain-containing protein 1 [Musa acuminata
JMFS036G11Sequence619004893 (11)ref|XP_010250439.1|2e-101PREDICTED: staphylococcal nuclease domain-containing protein 1 [Nelumbo nucifer
JMFS044G08Sequence611004893 (11)ref|XP_009421003.1|2e-103PREDICTED: staphylococcal nuclease domain-containing protein 1 [Musa acuminata
JMFS082C05Sequence626004893 (11)emb|CDO98283.1|1e-103unnamed protein product [Coffea canephora]
JMFS094H09Sequence616004893 (11)ref|XP_010250439.1|3e-106PREDICTED: staphylococcal nuclease domain-containing protein 1 [Nelumbo nucifer
JMFS101C11Sequence625004893 (11)ref|XP_009421003.1|1e-105PREDICTED: staphylococcal nuclease domain-containing protein 1 [Musa acuminata
JMFS117A07Sequence624004893 (11)ref|XP_010250439.1|1e-103PREDICTED: staphylococcal nuclease domain-containing protein 1 [Nelumbo nucifer
JMFS117A08Sequence319004893 (11)ref|XP_008797087.1|8e-43PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Phoenix da
JMFS128G08Sequence612004893 (11)ref|XP_010250439.1|2e-103PREDICTED: staphylococcal nuclease domain-containing protein 1 [Nelumbo nucifer
JMFS145A02Sequence624004893 (11)ref|XP_009421003.1|1e-103PREDICTED: staphylococcal nuclease domain-containing protein 1 [Musa acuminata
JMFS163D06Sequence624004893 (11)ref|XP_010250439.1|8e-103PREDICTED: staphylococcal nuclease domain-containing protein 1 [Nelumbo nucifer

Alignment

This contig is upended


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JMFS082C05+                                                CTCCAAGCCAAGGTCCTTTGGTG
                      ____________________________________________________________
consensus                                                  CTCCAAGCCAAGGTCCTTTGGTG
 
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JMFS082C05+           ATTCACCACCATCAGAATAGTAGACTGAACCAATCAGATTGCTAAATTTATCAACACCCT
                      ____________________________________________________________
consensus             ATTCACCACCATCAGAATAGTAGACTGAACCAATCAGATTGCTAAATTTATCAACACCCT
 
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JMFS082C05+           CGAGAACAATTCTAACATCTCTATTTAAAACACGAATTTCAGTGAAATGTTTGGCTTCTC
                      ____________________________________________________________
consensus             CGAGAACAATTCTAACATCTCTATTTAAAACACGAATTTCAGTGAAATGTTTGGCTTCTC
 
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JMFS082C05+           TGCCATATGGATCAGGTGCAACTTCTGTTATGGATGCTGTCGAAGCTGCAAGTCTCTGTG
                      ____________________________________________________________
consensus             TGCCATATGGATCAGGTGCAACTTCTGTTATGGATGCTGTCGAAGCTGCAAGTCTCTGTG
 
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JMFS082C05+           CTGATGTTAGAGGTGCACGAGGATCAGCCGACGAATCTCCATTTGCTTCGCTAGGGGTTA
                      ____________________________________________________________
consensus             CTGATGTTAGAGGTGCACGAGGATCAGCCGACGAATCTCCATTTGCTTCGCTAGGGGTTA
 
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JMFS082C05+           TTTCAGTTTCAACAGGAGTCTCAACTGTTGCCCTTCTTCCCATGGAAGGTGACTGAATTC
                      ____________________________________________________________
consensus             TTTCAGTTTCAACAGGAGTCTCAACTGTTGCCCTTCTTCCCATGGAAGGTGACTGAATTC
 
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JMFS082C05+           CAGCAACAAAAACTTGGACAAACTGGAAGTCTGGAAGTAAATACACACGGAGTGTGCTTC
                      ____________________________________________________________
consensus             CAGCAACAAAAACTTGGACAAACTGGAAGTCTGGAAGTAAATACACACGGAGTGTGCTTC
 
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JMFS082C05+           CATCACGAATCTGCTCAACAATAGCTTGCATGGGTTTCCCTTTGTTTGCATCCAAGAGAC
JMFS094H09+                                       CATGGGTTTCCCTTTGTTTGCATCCAAGAGAC
JMFS044G08+                                                    TTGTTGGCATCCAAGAGAC
JMFS128G08+                                       CATGGGTTTCCCTNTGTNTGCATCCAAGAGAC
JMFS101C11+                                       CATGGGTTTCCCTTTGTTTGCATCCAAGAGAC
JMFS010F09+                                                                   AGAC
JMFS145A02+                                        ATGGGTTTCCCTTTGTNTGCATCCAAGAGAC
JMFS117A07+                                        ATGGGTTTCCCTTTGTTTGCATCCAAGAGAC
JMFS036G11+                                             TTTCCCTTTGTTTGCATCCAAGAGAC
JMFS163D06+                                              TTCCCTTTGTTTGCATCCAAGAGAC
                      ____________________________________________________________
consensus             CATCACGAATCTGCTCAACAATAGCTTGCATGGGTTTCCCTTTGTTTGCATCCAAGAGAC
 
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JMFS082C05+           CCATTGCATCAAAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS094H09+           CCATTGCATCANAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS044G08+           CCATTGCATCAAAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS128G08+           CCATTGCATCANAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS101C11+           CCATTGCATCAAAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS010F09+           CCATTGCATCAAAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS145A02+           CCATTGCATCAAAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS117A07+           CCATGNCATCANAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS036G11+           CCATGCATCAAAGTTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
JMFS163D06+           CCATTGCATCANAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
                      ____________________________________________________________
consensus             CCATTGCATCAAAGTTACTAGAATCACCAATGGCAGAGGGAGGTAAGTTCCTGACGGATG
 
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JMFS082C05+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS094H09+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS044G08+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS128G08+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS101C11+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS010F09+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS145A02+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS117A07+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS036G11+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
JMFS163D06+           CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
                      ____________________________________________________________
consensus             CATCTTGAGCACCAGGCTCCCTGTTCCATCGACCTAGACCTTGTTGTTTGGCATTTTCTT
 
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JMFS082C05+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS094H09+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS044G08+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS128G08+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS101C11+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS010F09+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS145A02+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS117A07+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS036G11+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
JMFS163D06+           CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
                      ____________________________________________________________
consensus             CAAGGCGTAGTAGTTCTTGTAAGAAGGGGCTAGCTTCTCCCTTCTGTTGACCCTGCTCTC
 
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JMFS082C05+           TAA                                                         
JMFS094H09+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS044G08+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS128G08+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS101C11+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS010F09+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS145A02+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS117A07+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS117A08+                           TTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS036G11+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
JMFS163D06+           TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
                      ____________________________________________________________
consensus             TAACCCTCGCCCAGCCTTCAGCAACAACCAACAATGCAACGTTCTTATCGCCAAGGAAAA
 
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JMFS094H09+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS044G08+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS128G08+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS101C11+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS010F09+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS145A02+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS117A07+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS117A08+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS036G11+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
JMFS163D06+           CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
                      ____________________________________________________________
consensus             CAGAGCCAAACTCTCGCCCTATGGATGGTACAGTGTATTCAACTTTGAAAGTGACCTCCT
 
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JMFS094H09+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS044G08+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS128G08+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS101C11+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS010F09+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS145A02+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS117A07+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS117A08+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS036G11+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
JMFS163D06+           TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
                      ____________________________________________________________
consensus             TTCCAATGCAAAGCTTCCTTAAAAACTCCCTGCTTTCCCATGCAAAAGGCTCATCCGTAC
 
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JMFS094H09+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS044G08+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS128G08+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS101C11+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS010F09+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS145A02+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS117A07+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS117A08+           CACCAATACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTATGGGG
JMFS036G11+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
JMFS163D06+           CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
                      ____________________________________________________________
consensus             CACCACGACGTGCCAATCTTGGTGCAATTAAAGATGACAAAGTGATTGTCTTTTCTGGGG
 
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JMFS094H09+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS044G08+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS128G08+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS101C11+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS010F09+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS145A02+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS117A07+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS117A08+           GTATTTCAGCCTTGGTTCTTCCCATTATTAGCAAAGCTGTCACCAGAGGGAACAGCCTTC
JMFS036G11+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
JMFS163D06+           GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
                      ____________________________________________________________
consensus             GTATTTCAGCCTTGGTACTTCCCATTATTAGC-AAGCTGTCACCAGAGGGAACAGCCTTC
 
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JMFS094H09+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS044G08+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS128G08+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS101C11+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS010F09+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS145A02+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS117A07+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS117A08+           TCTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGT                         
JMFS036G11+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
JMFS163D06+           ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
                      ____________________________________________________________
consensus             ACTCTTCCCCTCAACCATCCTGTGGCTCCAGCTGTTGACGCCATTTCAACAGCTAAAGGT
 
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JMFS094H09+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATT                     
JMFS044G08+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCT             
JMFS128G08+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGG                   
JMFS101C11+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCTTTGTA        
JMFS010F09+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCTTTGTAAA      
JMFS145A02+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCTTTGTAAA      
JMFS117A07+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCTTTGTAAA      
JMFS036G11+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCTTTGTAAA      
JMFS163D06+           CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCTTTGTAAACTGTAA
                      ____________________________________________________________
consensus             CTATTCGAGCAGAGAGTTGCGGGTTCGAAATCGAGAATTGGGAGGCTTTGTAAACTGTAA