Contig 004891:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS162F02Sequence588004891 (6)
JMSF003I03Sequence244004891 (6)740008331 (7)emb|CDO99955.1|8e-61unnamed protein product [Coffea canephora]
JMSF003L24Sequence296004891 (6)735008331 (7)gb|KDO54898.1|8e-35hypothetical protein CISIN_1g0205022mg, partial [Citrus sinensis]
JMSF004L24Sequence372004891 (6)338008331 (7)
JMSF044N09Sequence811004891 (6)674008331 (7)emb|CDO99955.1|2e-78unnamed protein product [Coffea canephora]
JMSF051H13Sequence710004891 (6)754008331 (7)emb|CDO99955.1|4e-59unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF044N09+                                                          TAAGGTTTTGGGT
                      ____________________________________________________________
consensus                                                            TAAGGTTTTGGGT
 
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JMSF044N09+           ATGGTTGTTGTACCACGCCCCACTGCGAACCCCTCAACTCACCAAGAGTGAAACGCTTGA
                      ____________________________________________________________
consensus             ATGGTTGTTGTACCACGCCCCACTGCGAACCCCTCAACTCACCAAGAGTGAAACGCTTGA
 
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JMSF044N09+           TAAAAACCCTTCATAAATTCAGTCAGGTGAAGAAGACAAGCCCTATGACTTCGAATTCTG
JMSF051H13+                                          GAAGACAAGCCCTATGACTTCGAATTCTG
                      ____________________________________________________________
consensus             TAAAAACCCTTCATAAATTCAGTCAGGTGAAGAAGACAAGCCCTATGACTTCGAATTCTG
 
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JMSF044N09+           GGAACTGTGTACAGGGAGATATTGCAATTCCCAGATACAAGTATAGGGGAGATATGCATG
JMSF051H13+           GGAACTGTGTACAGGGAGATATTGCAATTCCCAGATACAAGTATAGGGGAGATATGCATG
                      ____________________________________________________________
consensus             GGAACTGTGTACAGGGAGATATTGCAATTCCCAGATACAAGTATAGGGGAGATATGCATG
 
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JMSF044N09+           ACAAGCAGCATTACCACATGCTATGAAAAAGTATTATTTGAGGCAGTTTCAGAGAGAGAG
JMSF051H13+           ACAAGCAGCATTACCACATGCTATGAAAAAGTATTATTTGAGGCAGTTTCAGAGAGAGAG
                      ____________________________________________________________
consensus             ACAAGCAGCATTACCACATGCTATGAAAAAGTATTATTTGAGGCAGTTTCAGAGAGAGAG
 
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JMSF044N09+           AGAGATCACTAATCTTGAACAACTTCACACACCAAGATTTACTGCTCAGAGTGATGCAAC
JMSF051H13+           AGAGATCACTAATCTTGAACAACTTCACACACCAAGATTTACTGCTCAGAGTGATGCAAC
JMFS162F02+                       TCTTGAACAACTTCACACACCAAGATTTACTGCTCAGAGTGATGCAAC
                      ____________________________________________________________
consensus             AGAGATCACTAATCTTGAACAACTTCACACACCAAGATTTACTGCTCAGAGTGATGCAAC
 
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JMSF044N09+           CATGTATGTCAATGCCCTCTAAATTAACCAGACTGTCCACACCTGGAAGCTCAATCAAAT
JMSF051H13+           CATGTATGTCAATGCCCTCTAAATTAACCAGACTGTCCACACCTGGAAGCTCAATCAAAT
JMFS162F02+           CATGTATGTCAATGCCCTCTAAATTAACCAGACTGTCCACACCTGGAAGCTCAATCAAAT
                      ____________________________________________________________
consensus             CATGTATGTCAATGCCCTCTAAATTAACCAGACTGTCCACACCTGGAAGCTCAATCAAAT
 
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JMSF044N09+           TACTGCACTCATAAAGATACAATTCATGTAGCCTTAATAAGCCAGCGAGGTCGATCTTGT
JMSF051H13+           TACTGCACTCATAAAGATACAATTCATGTAGCCTTAATAAGCCAGCGAGGTCGATCTTGT
JMSF004L24+                                                       GCGAGGTCGATCTTGT
JMFS162F02+           TACTGCACTCATAAAGATACAATTCATGTAGCCTTAATAAGCCAGCGAGGTCGATCTTGT
                      ____________________________________________________________
consensus             TACTGCACTCATAAAGATACAATTCATGTAGCCTTAATAAGCCAGCGAGGTCGATCTTGT
 
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JMSF044N09+           ACATTTTCCAGCAATGGAGAATAACGCGTGGACAGTGTCTCTGATTGATTGTGGCAATTC
JMSF051H13+           ACATTTTCCAGCAATGGAGAATAACGCGTGGACAGTGTCTCTGATTGATTGTGGCAATTC
JMSF004L24+           ACATTTTCCAGCAATGGAGAATAACGCGTGGACAGTGTCTCTGATTGATTGTGGCAATTC
JMFS162F02+           ACATTTTCCAGCAATGGAGAATAACGCGTGGACAGTGTCTCTGATTGATTGTGGCAATTC
                      ____________________________________________________________
consensus             ACATTTTCCAGCAATGGAGAATAACGCGTGGACAGTGTCTCTGATTGATTGTGGCAATTC
 
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JMSF044N09+           AACCATAGAGAGACAGTGTCTTCAGACTACGAGGTCCAGTAAAGTTTAGGGCTCTAAGCT
JMSF051H13+           AACCATAGAGAGACAGTGTCTTCAGACTACGAGGTCCAGTAAAGTTTAGGGCTCTAAGCT
JMSF004L24+           AACCATAGAGAGACAGTGTCTTCAGACTACGAGGTCCAGTAAAGTTTAGGGCTCTAAGCT
JMSF003I03+                                                                 TAAGCT
JMSF003L24+              CATAGAGAGACAGTGTCTTCAGACTACGAGGTCCAGTAAAGTTTAGGGCTCTAAGCT
JMFS162F02+           AACCATAGAGAGACAGTGTCTTCAGACTACGAGGTCCAGTAAAGTTTAGGGCTCTAAGCT
                      ____________________________________________________________
consensus             AACCATAGAGAGACAGTGTCTTCAGACTACGAGGTCCAGTAAAGTTTAGGGCTCTAAGCT
 
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JMSF044N09+           TCTTGCAACCAACAAGCTCTATCCAAAATCCTGCAAATTAGGTTGAAATTCTCATTTCTC
JMSF051H13+           TCTTGCAACCAACAAGCTCTATCCAAAATCCTGCAAATTAGGTTGAAATTCTCATTTCTC
JMSF004L24+           TCTTGCAACCAACAAGCTCTATCCAAAATCCTGCAAATTAGGTTGAAATTCTCATTTCTC
JMSF003I03+           TCTTGCAACCAACAAGCTCTATCCAAAATCCTGCAAATTAGGTTGAAATTCTCATTTCTC
JMSF003L24+           TCTTGCAACCAACAAGCTCTATCCAAAATCCTGCAAATTAGGTTGAAATTCTCATTTCTC
JMFS162F02+           TCTTGCAACCAACAAGCTCTATCCAAAATCCTGCAAATTAGGTTGAAATTCTCATTTCTC
                      ____________________________________________________________
consensus             TCTTGCAACCAACAAGCTCTATCCAAAATCCTGCAAATTAGGTTGAAATTCTCATTTCTC
 
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JMSF044N09+           AACCGTCGAATCGGAATATTTCGTCTAGGCCGTATCACTCCTCCGGAATTGGTCCTGAGT
JMSF051H13+           AACCGTCGAATCGGAATATTTCGTCTAGGCCGTATCACTCCTCCGGAATTGGTCCTGAGT
JMSF004L24+           AACCGTCGAATCGGAATATTTCGTCTAGGCCGTATCACTCCTCCGGAATTGGTCCTGAGT
JMSF003I03+           AACCGTCGAATCGGAATATTTCGTCTAGGCCGTATCACTCCTCCGGAATTGGTCCTGAGT
JMSF003L24+           AACCGTCGAATCGGAATATTTCGTCTAGGCCGTATCACTCCTCCGGAATTGGTCCTGAGT
JMFS162F02+           AACCGTCGAATCGGAATATTTCGTCTAGGCCGTATCACTCCTCCGGAATTGGTCCTGAGT
                      ____________________________________________________________
consensus             AACCGTCGAATCGGAATATTTCGTCTAGGCCGTATCACTCCTCCGGAATTGGTCCTGAGT
 
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JMSF044N09+           GAAAATTGATGATGCTTTCCTATATTTATAATGCTTCACCCCAACGGCTT---CTACACC
JMSF051H13+           GAAAATTGATGATGCTTTCCTCTATTTATAATGCTTCACCCCAAC-GCTTCTCCTACACC
JMSF004L24+           GAAAATTGATGATGCTTTCCTCTATTTATAATGCTTCACCCCAACGGCTTCTCCTACACC
JMSF003I03+           GAAAATTGATGATGCTTTCCTCTATTTATAATGCTTCACCCCAACGGCTTCTCCTACACC
JMSF003L24+           GAAAATTGATGATGCTTTCCTCTATTTATAATGCTTCACCCCAACGGCTTCTCCTACACC
JMFS162F02+           GAAAATTGATGATGCTTTCCTCTATTTATAATGCTTCACCCCAACGGCTTCTCCTACACC
                      ____________________________________________________________
consensus             GAAAATTGATGATGCTTTCCTCTATTTATAATGCTTCACCCCAACGGCTTCTCCTACACC
 
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JMSF044N09+           GCCGTCCGAACGCCTACGCTGCTCTGGTTCGCGTCGATTAGCTTTGGGCATTTCTCTTCC
JMSF051H13+           GCCGTCCGAACGCCTACGCTGCTCTGGTTCGCGTCGATTAGCTTTGGGCATTTCTCTTCC
JMSF004L24+           GCCGTCCGAACGCCTACGCTGCTCTGGTTCGCGTCGATTAGCTTTGGGCATTTCTC    
JMSF003I03+           GCCGTCCGAACGCCTACGCTGCTCTGGTTCGCGTCGATTAGCTTTGGGCATTTCTCT   
JMSF003L24+           GCCGTCCGAACGCCTACGCTGCTCTGGTTCGCGTCGATTAGCTTTGGGCATTTCTCTTC 
JMFS162F02+           GCCGTCCGAACGCCTACGCTGCTCTGGTTCGCGTCGATTAGCTTTGGGCATTTCTCTTCC
                      ____________________________________________________________
consensus             GCCGTCCGAACGCCTACGCTGCTCTGGTTCGCGTCGATTAGCTTTGGGCATTTCTCTTCC
 
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JMSF044N09+           GATCGACTGCTTCCTTGACT                                        
JMSF051H13+           GATCGACTGCTTCCTTGACT                                        
JMFS162F02+           GATCGACTGCTTCCTTGACTGGCAGAAAAGAGAAACATGGACTTGCAATTTGGGCTGGCC
                      ____________________________________________________________
consensus             GATCGACTGCTTCCTTGACTGGCAGAAAAGAGAAACATGGACTTGCAATTTGGGCTGGCC