Contig 004888:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS142E07Sequence624004888 (2)ref|XP_004248454.1|217PREDICTED: uncharacterized protein LOC101252826 [Solanum lycopersicum]
JMFS160H01Sequence431004888 (2)gb|EYU32228.1|4e-70hypothetical protein MIMGU_mgv1a000273mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFS142E07+                                                          GTTACTATTTCTG
                      ____________________________________________________________
consensus                                                            GTTACTATTTCTG
 
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JMFS142E07+           TCTTGTTTGGAGCAGGATTCATTTTTGCACTTTCTTGCACTCTGGTTCGCCTTAATGGAC
                      ____________________________________________________________
consensus             TCTTGTTTGGAGCAGGATTCATTTTTGCACTTTCTTGCACTCTGGTTCGCCTTAATGGAC
 
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JMFS142E07+           TGGAGTTATCACCATAAGTGTCAGTTAGCTCAGGACTAGATCGTGTTCTGGCAAAGAGAA
                      ____________________________________________________________
consensus             TGGAGTTATCACCATAAGTGTCAGTTAGCTCAGGACTAGATCGTGTTCTGGCAAAGAGAA
 
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JMFS142E07+           ACCTGCTCTGAATGTCTTTCACCAAATTATCAGATGCCGAATTTCTATGACTTACATCAG
                      ____________________________________________________________
consensus             ACCTGCTCTGAATGTCTTTCACCAAATTATCAGATGCCGAATTTCTATGACTTACATCAG
 
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JMFS142E07+           AAAGCACATTCTGACGAGAAGTAGCTTCCCTTGTAGAATGATCTGATACCCTTGAGGCAT
                      ____________________________________________________________
consensus             AAAGCACATTCTGACGAGAAGTAGCTTCCCTTGTAGAATGATCTGATACCCTTGAGGCAT
 
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JMFS142E07+           TTGAATTTCTATGAGTTTTTTTGTTTTGAGTATAATTGGAATAATCATTTGGTTTGGACA
                      ____________________________________________________________
consensus             TTGAATTTCTATGAGTTTTTTTGTTTTGAGTATAATTGGAATAATCATTTGGTTTGGACA
 
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JMFS142E07+           TGCTTCCAGAGAAATGATTACCAGGATGAGAAGAAACATGTGAATGGGTTCCCTCAGTCT
                      ____________________________________________________________
consensus             TGCTTCCAGAGAAATGATTACCAGGATGAGAAGAAACATGTGAATGGGTTCCCTCAGTCT
 
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JMFS142E07+           TTACATCATGACCAGATTCATTTACCTTTCTGGAATTTGTACTGACACTCAAGATTTCAT
                      ____________________________________________________________
consensus             TTACATCATGACCAGATTCATTTACCTTTCTGGAATTTGTACTGACACTCAAGATTTCAT
 
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JMFS142E07+           TCTCAGGTTGGTGATGCAAATCTGACAATTTCAAACACGACAAATCAACTCTTGGTGCAT
JMFS160H01+                                                               TGGTGCAT
                      ____________________________________________________________
consensus             TCTCAGGTTGGTGATGCAAATCTGACAATTTCAAACACGACAAATCAACTCTTGGTGCAT
 
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JMFS142E07+           CAGGACGACAGCCAGTGCCATGTCTGTCCCACGTATTCATGAAAAACTGATTTACTTCAT
JMFS160H01+           CAGGACGATGGCCACTGCCGTGCCTTTCCCATGTATTCATGAAAAACTGATTTACTTCAT
                      ____________________________________________________________
consensus             CAGGACGATGGCCAGTGCCGTGTCTTTCCCATGTATTCATGAAAAACTGATTTACTTCAT
 
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JMFS142E07+           AGATAAGATTTTCTTTAGGACAATCTAGTAATCTTTCCAGCCTTTTTGCACCAAA     
JMFS160H01+           AAATAACATTTTCTTTCGGACAATCTAATAACCTTTCCAACCTTTTGGCACCAAACGTAA
                      ____________________________________________________________
consensus             AGATAAGATTTTCTTTCGGACAATCTAGTAATCTTTCCAGCCTTTTTGCACCAAACGTAA
 
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JMFS160H01+           ATGCGCTTCGTATCCTAAAAAAATTACCTTTACTGACACTACGCCCAAGGTTGTTGCTCA
                      ____________________________________________________________
consensus             ATGCGCTTCGTATCCTAAAAAAATTACCTTTACTGACACTACGCCCAAGGTTGTTGCTCA
 
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JMFS160H01+           CTCGTAAAGGATCAATAACATTAAAATGTTTAGAAACAAAGGGTTGTCCTGGAGTTTCCT
                      ____________________________________________________________
consensus             CTCGTAAAGGATCAATAACATTAAAATGTTTAGAAACAAAGGGTTGTCCTGGAGTTTCCT
 
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JMFS160H01+           GGATACCAGGGAGAACTGCATATACAGCGCTACAAGAGTCCAGAAATCTTTTGGTGAGAA
                      ____________________________________________________________
consensus             GGATACCAGGGAGAACTGCATATACAGCGCTACAAGAGTCCAGAAATCTTTTGGTGAGAA
 
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JMFS160H01+           GCAATTCTCCGCTATCTTTTCGGGGAGGTTGCGCATTTACATCTGGGAGTGAACTGATGG
                      ____________________________________________________________
consensus             GCAATTCTCCGCTATCTTTTCGGGGAGGTTGCGCATTTACATCTGGGAGTGAACTGATGG