Contig 004887:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS120B03Sequence627004887 (3)emb|CDP12983.1|3e-95unnamed protein product [Coffea canephora]
JMFS154H05Sequence626004887 (3)emb|CDP12983.1|2e-81unnamed protein product [Coffea canephora]
JMFS159G01Sequence454004887 (3)ref|XP_011081326.1|3e-50PREDICTED: protein NRT1/ PTR FAMILY 7.3-like [Sesamum indicum]

Alignment

This contig is upended


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JMFS120B03+                                                    TCATCGTCGAATTGATCTG
                      ____________________________________________________________
consensus                                                      TCATCGTCGAATTGATCTG
 
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JMFS120B03+           CNCCGAATGTAGCAATGTTTGGCTGGTATCCTCCATTTCCCAGAGCCACCAAGTAGATTG
JMFS154H05+                                             ATTTCCCAGAGCCACCAAGTAGATTG
                      ____________________________________________________________
consensus             CNCCGAATGTAGCAATGTTTGGCTGGTATCCTCCATTTCCCAGAGCCACCAAGTAGATTG
 
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JMFS120B03+           AGACATAGAACATACCAATTACCCAGCTTGAATGGGAGCCACACTGGGTTTCTTTATCCC
JMFS154H05+           AGACATAGAACATACCAATTACCCAGCTTGAATGGGAGCCACACTGGGTTTCTTTATCCC
                      ____________________________________________________________
consensus             AGACATAGAACATACCAATTACCCAGCTTGAATGGGAGCCACACTGGGTTTCTTTATCCC
 
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JMFS120B03+           CACAGCCTTTTGGTTTCAGCAAGTAGAGTTGAGATGTCACAGATAATAACACCAATCCAA
JMFS154H05+           CACAGCCTTTTGGTTTCAGCAAGTAGAGTTGAGATGTCACAGATAATAACACCAATCCAA
                      ____________________________________________________________
consensus             CACAGCCTTTTGGTTTCAGCAAGTAGAGTTGAGATGTCACAGATAATAACACCAATCCAA
 
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JMFS120B03+           TGACATAGATGACCTGGAAAATGGCACATGTTTTGTATCTTCCCCAATATGAATCACTGA
JMFS154H05+           TGACATAGATGACCTGGAAAATGGCACATGTTTTGTATCTTCCCCAATATGAATCACTGA
JMFS159G01+                                     CATGTTTTGTATCTTCCCCAATATGAATCACTGA
                      ____________________________________________________________
consensus             TGACATAGATGACCTGGAAAATGGCACATGTTTTGTATCTTCCCCAATATGAATCACTGA
 
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JMFS120B03+           GAAATGCACCAAGAAGGGAGAAGATGTAAACAGTGCCAGTCCATTTGCTCACACTGTTGG
JMFS154H05+           GAAATGCACCAAGAAGGGAGAAGATGTAAACAGTGCCAGTCCATTTGCTCACACTGTTGG
JMFS159G01+           GAAATGCACCAAGAAGGGAGAAGATGTAACCAGTGCCAGTCCATTTGCTCACACTGTTGG
                      ____________________________________________________________
consensus             GAAATGCACCAAGAAGGGAGAAGATGTAAACAGTGCCAGTCCATTTGCTCACACTGTTGG
 
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JMFS120B03+           CTGCATCAGCATTTTTCTCTCCCATCACTCTTGTCAGGAACAGAACCAAGTTTACCCCAA
JMFS154H05+           CTGCATCAGCATTTTTCTCTCCCATCACTCTTGTCAGGAACAGAACCAAGTTTACCCCAA
JMFS159G01+           CTGCATCAGCATTTTTCTCTCCCATCACTCTTGTCAGGAACAGAACCAAGTTTACCCCAA
                      ____________________________________________________________
consensus             CTGCATCAGCATTTTTCTCTCCCATCACTCTTGTCAGGAACAGAACCAAGTTTACCCCAA
 
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JMFS120B03+           CACCAAAGAATGCCAGAGTAGCTAGACCTTGATTCAGCAGAATGATCATTCCGGCGAACC
JMFS154H05+           CACCAAAGAATGCCAGAGTAGCTAGACCTTGATTCAGCAGAATGATCATTCCGGCGAACC
JMFS159G01+           CACCAAAGAATGCCAGAGTAGCTAGCCCTTGATTCAGCAGAATGATCATTCCGGCGAACC
                      ____________________________________________________________
consensus             CACCAAAGAATGCCAGAGTAGCTAGACCTTGATTCAGCAGAATGATCATTCCGGCGAACC
 
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JMFS120B03+           ATTTTCCGGTCCGGTCACGGATAGCCGGCCGGCCATGCATGTCCACCGATCCATCCCTAG
JMFS154H05+           ATTTTCCGGTCCGGTCACGGATAGCCGGCCGGCCATGCATGTCCACCGATCCATCCCTAG
JMFS159G01+           ATTTTCCGGTCCGGTCACGGATAGCCGGCCGGCCATGCATGTCCACCGATCCATCCCTAG
                      ____________________________________________________________
consensus             ATTTTCCGGTCCGGTCACGGATAGCCGGCCGGCCATGCATGTCCACCGATCCATCCCTAG
 
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JMFS120B03+           TTCTCTCTCCTTCACGATCATCACCATTCATCCCCGACACCGCCTTCTTGGAGACTTCTA
JMFS154H05+           TTCTCTCTCCTTCACGATCATCACCATTCATCCCCGACACCGCCTTCTTGGAGACTTCTA
JMFS159G01+           TTCTCTCTCCTTCACGATCATCACCATTCATCCCCGACACCGCCTTCTTGGAGACTTCTA
                      ____________________________________________________________
consensus             TTCTCTCTCCTTCACGATCATCACCATTCATCCCCGACACCGCCTTCTTGGAGACTTCTA
 
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JMFS120B03+           AGCAAGCCATTGATGATGGAAGCTAAGGTTCAGAGAGATTTTGTTGCTTCAAGCTAGCTA
JMFS154H05+           AGCAAGCCATTGATGATGGAAGCTAAGGTTCAGAGAGATTTTGTTGCTTCAAGCTAGCTA
JMFS159G01+           AGCAAGCCATTGATGATGGAAGCTAAGGTTCAGAGAGATTTTGTTGCTTCAAGCTAGCTA
                      ____________________________________________________________
consensus             AGCAAGCCATTGATGATGGAAGCTAAGGTTCAGAGAGATTTTGTTGCTTCAAGCTAGCTA
 
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JMFS120B03+           GCTGGCTA                                                    
JMFS154H05+           GCTGGCTATGGAGAAGGAAGAAGAGGGCTTTAATGGCGGTCGAAGCTAAGGAAAGAGCAA
JMFS159G01+           GCTGGCTATGGAGAAGGAAGAAGAGGGCTTTAATGGCGGTCGAAGCTAAGGAAAGAGCAA
                      ____________________________________________________________
consensus             GCTGGCTATGGAGAAGGAAGAAGAGGGCTTTAATGGCGGTCGAAGCTAAGGAAAGAGCAA