Contig 004885:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS157F12Sequence473004885 (2)ref|XP_009629577.1|2e-55PREDICTED: ABC transporter C family member 2-like [Nicotiana tomentosiformis] r
JMFS162B06Sequence594004885 (2)ref|XP_008349169.1|1e-76PREDICTED: ABC transporter C family member 1-like [Malus domestica]

Alignment

This contig is upended


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JMFS162B06+              TACAGACCTGCTGTAAAACTCTGAAACAGCCATTATGAGGTTGAACATCACAGAGTC
                      ____________________________________________________________
consensus                TACAGACCTGCTGTAAAACTCTGAAACAGCCATTATGAGGTTGAACATCACAGAGTC
 
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JMFS162B06+           CCCTACCAATGCATAAATTACTCCAAACCTAACAAACCACCGAGTCTCTCGGATGTAGAC
                      ____________________________________________________________
consensus             CCCTACCAATGCATAAATTACTCCAAACCTAACAAACCACCGAGTCTCTCGGATGTAGAC
 
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JMFS162B06+           TTTTGTTTCGATGCCAATCATCACCACCATAGAGAGCCATGCAAGAGCTTCAATGGTTAA
JMFS157F12+                  TCGATGCCAATCATCACCACCATAGAGAGCCATGCAAGAGCTTCAATGGTTAA
                      ____________________________________________________________
consensus             TTTTGTTTCGATGCCAATCATCACCACCATAGAGAGCCATGCAAGAGCTTCAATGGTTAA
 
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JMFS162B06+           GGAAATTATCTCATATGGAGCGATACCAGTCTGCCCATCAACATTTAAGACAGAGATTCC
JMFS157F12+           GGAAATTATCTCATATGGAGCGATACCAGTCTGCCCATCAACATTTAAGACAGAGATTCC
                      ____________________________________________________________
consensus             GGAAATTATCTCATATGGAGCGATACCAGTCTGCCCATCAACATTTAAGACAGAGATTCC
 
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JMFS162B06+           CATGACCAATCTATATAAGGGTTCACCGGTACAATAAGCAGCCAGCAAACCCAACACATA
JMFS157F12+           CATGACCAATCTATATAAGGGTTCACCGGTACAATAAGCAGCCAGCAAACCCAACACATA
                      ____________________________________________________________
consensus             CATGACCAATCTATATAAGGGTTCACCGGTACAATAAGCAGCCAGCAAACCCAACACATA
 
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JMFS162B06+           GTTGTAGTATTTCGACTTTAAACAGAACCTCTGGACCGTGAAGTCTTTCTTTGTCTTCCA
JMFS157F12+           GTTGTAGTATTTCGACTTTAAACAGAACCTCTGGACCGTGAAGTCTTTCTTTGTCTTCCA
                      ____________________________________________________________
consensus             GTTGTAGTATTTCGACTTTAAACAGAACCTCTGGACCGTGAAGTCTTTCTTTGTCTTCCA
 
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JMFS162B06+           TATTCGGTATAGGCACAGCACCAAAATCAGAAGATGAGAAATAGATATCACCAGAGTGTC
JMFS157F12+           TATTCGGTATAGGCACAGCACCAAAATCAGAAGATGAGAAATAGATATCACCAGAGCGTC
                      ____________________________________________________________
consensus             TATTCGGTATAGGCACAGCACCAAAATCAGAAGATGAGAAATAGATATCACCAGAGTGTC
 
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JMFS162B06+           GGTTACACATGGGGTGTAAACTCCAAATGCATTCTCCACCGCGGTTGACCACACCCCATT
JMFS157F12+           GGTTACACATGGGGTGTAAACTCCAAATGCATTCTCCACCGCGGTTGACCACACCCCATT
                      ____________________________________________________________
consensus             GGTTACACATGGGGTGTAAACTCCAAATGCATTCTCCACCGCGGTTGACCACACCCCATT
 
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JMFS162B06+           CTTCACTGGCTGACAATACCAATCCAATGGCTTGATAGCCATCTTTAGTCACTTTAACAC
JMFS157F12+           CTTCACTGGCTGACAATACCAATCCAATGGCTTGATAGCCATCTTTAGTCACTTTAACAC
                      ____________________________________________________________
consensus             CTTCACTGGCTGACAATACCAATCCAATGGCTTGATAGCCATCTTTAGTCACTTTAACAC
 
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JMFS162B06+           CACTACTGTACCCTTTATGGTCTCATTGACAGTATCCCAAATCCTTATTTGCTTCTC   
JMFS157F12+           CACTACTGTACCCTTTATGGTCTCATTGACAGTATCCCAAATCCTTATTTGCTTCTCTTC
                      ____________________________________________________________
consensus             CACTACTGTACCCTTTATGGTCTCATTGACAGTATCCCAAATCCTTATTTGCTTCTCTTC