Contig 004878:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS021B11+                                         GTAGACCGCTCTAAATTAAATCTAGATTCA
                      ____________________________________________________________
consensus                                           GTAGACCGCTCTAAATTAAATCTAGATTCA
 
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JMFS096A02+             GGCATCGACTTTTTTCCCAATTGGAGGTGACTCGGGCACAGGAGTTCGAATGTCCCAA
JMFS021B11+           TTGGCATCGACTTTTTTCCCAATTGGAGGTGACTCGGGCACAGGAGTTCGAATGTCCCAA
                      ____________________________________________________________
consensus             TTGGCATCGACTTTTTTCCCAATTGGAGGTGACTCGGGCACAGGAGTTCGAATGTCCCAA
 
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JMFS096A02+           TATAACGCCTGAGGATCAAATGTGGAGCTTGCAGATTTCATCGGAGTGGCGGCTAACCAC
JMFS021B11+           TATAACGCCTGAGGATCAAATGTGGAGCTTGCAGATTTCATCGGAGTGGCGGCTAACCAC
                      ____________________________________________________________
consensus             TATAACGCCTGAGGATCAAATGTGGAGCTTGCAGATTTCATCGGAGTGGCGGCTAACCAC
 
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JMFS096A02+           AACATCAACCCCAGCGAAGAAAAAGCAGCAACGAGAAGGACAATATATGGAACCGATACA
JMFS021B11+           AACATCAACCCCAGCGAAGAAAAAGCAGCAACGAGAAGGACAATATATGGAACCGATACA
                      ____________________________________________________________
consensus             AACATCAACCCCAGCGAAGAAAAAGCAGCAACGAGAAGGACAATATATGGAACCGATACA
 
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JMFS096A02+           CTGCTTCCAATATTCCACTTCAAATAGCTCACCCATTCACTATTTCCAAATACCATCTCT
JMFS021B11+           CTGCTTCCAATATTCCACTTCAAATAGCTCACCCATTCACTATTTCCAAATACCATCTCT
                      ____________________________________________________________
consensus             CTGCTTCCAATATTCCACTTCAAATAGCTCACCCATTCACTATTTCCAAATACCATCTCT
 
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JMFS096A02+           GTTACAAACACGATTTTGAGGCCAAGCATGCCAAAGAATGTGCCCAGAGACAAAAGCTCG
JMFS021B11+           GTTACAAACACGATTTTGAGGCCAAGCATGCCAAAGAATGTGCCCAGAGACAAAAGCTCG
                      ____________________________________________________________
consensus             GTTACAAACACGATTTTGAGGCCAAGCATGCCAAAGAATGTGCCCAGAGACAAAAGCTCG
 
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JMFS096A02+           GAGAGGGGCGAAATCTTGTGAGCGCCCATTATTGATCGGGATGAAGCGACTCTGAAAAGG
JMFS021B11+           GAGAGGGGCGAAATCTTGTGAGCGCCCATTATTGATCGGGATGAAGCGACTCTGAAAAGG
JMFS150B08+                    GAAATTTTGTGACTGCCCATTATTGATCTGGATGAGGCAACTCTGAAAAGG
                      ____________________________________________________________
consensus             GAGAGGGGCGAAATCTTGTGAGCGCCCATTATTGATCGGGATGAAGCGACTCTGAAAAGG
 
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JMFS096A02+           GGAATAACAGCAGATGGAAGCACAAGGGCTACCCCAACCTGTGTACATATCAGCATCTGA
JMFS021B11+           GGAATAACAGCAGATGGAAGCACAAGGGCTACCCCAACCTGTGTACATATCAGCATCTGA
JMFS150B08+           GGGATGACAGCAGATGGAAGCACAAGAGCAACCCCAACCTGAGTATATATCAGCAGTTGA
                      ____________________________________________________________
consensus             GGAATAACAGCAGATGGAAGCACAAGGGCTACCCCAACCTGTGTACATATCAGCATCTGA
 
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JMFS096A02+           TAAAGGCCTTCGGCTCCTGAAGTCCAAACACAATAGAGAGCTGGCACGATTGCCATAATT
JMFS021B11+           TAAAGGCCTTCGGCTCCTGAAGTCCAAACACAATAGAGAGCTGGCACGATTGCCATAATT
JMFS150B08+           TAAAGGCCTTCAGCTCCAGAATTCCAAACACAATACAGGGCTGGCACAATTGCAATAATT
                      ____________________________________________________________
consensus             TAAAGGCCTTCGGCTCCTGAAGTCCAAACACAATAGAGAGCTGGCACGATTGCCATAATT
 
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JMFS096A02+           CTGACCGTCACGTGATGAAGCCAACCCGGAAGCTCCATTCCAAACAAATCATGCACTACT
JMFS021B11+           CTGACCGTCACGTGATGAAGCCAACCCGGAAGCTCCATTCCAAACAAATCATGCACTACT
JMFS150B08+           CGGACGGTGACATGATGCAGCCAGCCTGGAAGGTCCATTCCAAACAAATCATGGAGTACT
                      ____________________________________________________________
consensus             CTGACCGTCACGTGATGAAGCCAACCCGGAAGCTCCATTCCAAACAAATCATGCACTACT
 
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JMFS096A02+           GCTTGCTTACCAAGATCCCAAGTGAGTGCAGTGATTTGATT                   
JMFS021B11+           GCTTGCTTACCAAGATCCCAAGTGAGTGCAGTGATTTGATTGGAG               
JMFS150B08+           ACTTGCTTACCAAGATCCCAAGTTAATGCAGTGATTTGATTTGAGGAAAGCAAAACCAGC
                      ____________________________________________________________
consensus             GCTTGCTTACCAAGATCCCAAGTGAGTGCAGTGATTTGATTTGAGGAAAGCAAAACCAGC
 
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JMFS150B08+           AATATCACAAATGGTGTCATTGAACTCCCAAAAACCTGATCAAGCAATGACAGCGCCTCA
                      ____________________________________________________________
consensus             AATATCACAAATGGTGTCATTGAACTCCCAAAAACCTGATCAAGCAATGACAGCGCCTCA
 
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JMFS150B08+           TGGAAGGTAAGCAGAACAAGACCAGTACTGTAGAATGCACTAGCTGCCAAATTCAGTAGT
                      ____________________________________________________________
consensus             TGGAAGGTAAGCAGAACAAGACCAGTACTGTAGAATGCACTAGCTGCCAAATTCAGTAGT
 
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JMFS150B08+           ACATAATTCACCAGGAAAATGCCACTGAAGACACTTAGAATCGCAAAAAAGTGGTCTTGG
                      ____________________________________________________________
consensus             ACATAATTCACCAGGAAAATGCCACTGAAGACACTTAGAATCGCAAAAAAGTGGTCTTGG